Fungal Genomics

at Utrecht University

General Properties

Protein IDOphun1|1233
Gene name
LocationContig_1484:442..1298
Strand-
Gene length (bp)856
Transcript length (bp)804
Coding sequence length (bp)804
Protein length (aa) 268

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF11927 DUF3445 Protein of unknown function (DUF3445) 7.6E-45 114 267

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 16 0.5

Transmembrane Domains

Domain # Start End Length
1 2 24 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophun1|1233
MMAFIFPAIALAVFGATLFLRPLLRKSGYLTTCSHSKDAPILGLEDDYRLADASVRLRSGFTVGQVRALGAFPDY
AKLSGVPLPSPVSASFRIEDAAPRPFRPLRWPYHQTMALQKLDPDYWLELESTYRSRIRQRQDLHAQHGSNILNS
LPGSELAQRELMEMAVQFLCARYPQYFELRGQTLVNHLLATEHHLDEVAPLRVLLDNVPEDFAVLLRDEGTGRYV
LRAGVVCSTIGWHVGEKMGMGLSEIHKAVPDFEEKLSLSVDR*
Coding >Ophun1|1233
ATGATGGCTTTCATCTTCCCAGCTATAGCCCTCGCCGTCTTCGGAGCAACCCTCTTTCTTCGACCGCTCCTCCGG
AAGTCGGGTTACCTCACGACATGCTCGCACAGCAAGGACGCACCCATCCTCGGCCTGGAAGACGACTACCGCCTC
GCCGATGCTTCGGTCCGGCTTCGTAGCGGCTTCACTGTCGGTCAGGTCCGGGCTCTGGGCGCGTTCCCCGATTAC
GCGAAGCTGTCTGGCGTGCCGCTCCCGTCACCCGTGTCCGCCTCATTCCGGATTGAAGACGCGGCGCCTCGGCCG
TTCAGACCGCTCCGATGGCCCTATCATCAGACAATGGCCCTCCAGAAGCTCGATCCGGATTACTGGCTCGAGCTG
GAAAGCACATACCGCTCTCGCATCCGCCAACGTCAAGACCTGCATGCCCAGCACGGAAGCAATATCCTCAACAGC
CTGCCAGGCTCTGAGCTGGCGCAAAGGGAACTGATGGAGATGGCGGTGCAGTTTCTGTGCGCGCGATACCCGCAG
TACTTTGAGCTGCGAGGTCAGACGCTGGTGAACCATCTTCTCGCAACGGAGCATCATCTCGACGAGGTGGCGCCG
CTTAGGGTCCTGCTGGATAACGTGCCCGAGGACTTTGCTGTTCTGTTGAGGGATGAGGGGACGGGGCGGTATGTG
TTGAGGGCGGGAGTGGTTTGCTCGACGATTGGGTGGCATGTTGGGGAGAAGATGGGGATGGGGCTTTCGGAGATT
CATAAGGCGGTGCCGGATTTTGAAGAGAAGCTGAGTCTGAGCGTTGATCGGTGA
Transcript >Ophun1|1233
ATGATGGCTTTCATCTTCCCAGCTATAGCCCTCGCCGTCTTCGGAGCAACCCTCTTTCTTCGACCGCTCCTCCGG
AAGTCGGGTTACCTCACGACATGCTCGCACAGCAAGGACGCACCCATCCTCGGCCTGGAAGACGACTACCGCCTC
GCCGATGCTTCGGTCCGGCTTCGTAGCGGCTTCACTGTCGGTCAGGTCCGGGCTCTGGGCGCGTTCCCCGATTAC
GCGAAGCTGTCTGGCGTGCCGCTCCCGTCACCCGTGTCCGCCTCATTCCGGATTGAAGACGCGGCGCCTCGGCCG
TTCAGACCGCTCCGATGGCCCTATCATCAGACAATGGCCCTCCAGAAGCTCGATCCGGATTACTGGCTCGAGCTG
GAAAGCACATACCGCTCTCGCATCCGCCAACGTCAAGACCTGCATGCCCAGCACGGAAGCAATATCCTCAACAGC
CTGCCAGGCTCTGAGCTGGCGCAAAGGGAACTGATGGAGATGGCGGTGCAGTTTCTGTGCGCGCGATACCCGCAG
TACTTTGAGCTGCGAGGTCAGACGCTGGTGAACCATCTTCTCGCAACGGAGCATCATCTCGACGAGGTGGCGCCG
CTTAGGGTCCTGCTGGATAACGTGCCCGAGGACTTTGCTGTTCTGTTGAGGGATGAGGGGACGGGGCGGTATGTG
TTGAGGGCGGGAGTGGTTTGCTCGACGATTGGGTGGCATGTTGGGGAGAAGATGGGGATGGGGCTTTCGGAGATT
CATAAGGCGGTGCCGGATTTTGAAGAGAAGCTGAGTCTGAGCGTTGATCGGTGA
Gene >Ophun1|1233
ATGATGGCTTTCATCTTCCCAGCTATAGCCCTCGCCGTCTTCGGAGCAACCCTCTTTCTTCGACCGCTCCTCCGG
AAGTCGGGTTACCTCACGACATGCTCGCACAGCAAGGACGCACCCATCCTCGGCCTGGAAGACGACTACCGCCTC
GCCGATGCTTCGGTCCGGCTTCGTAGCGGCTTCACTGTCGGTCAGGTCCGGGCTCTGGGCGCGTTCCCCGATTAC
GCGAAGCTGTCTGGCGTGCCGCTCCCGTCACCCGTGTCCGCCTCATTCCGGATTGAAGACGCGGCGCCTCGGCCG
TTCAGACCGCTCCGATGGCCCTATCATCAGACAATGGGTACGATCTTCAAGACCTTCATGTCTCGTCAATCGTCG
TTAACGAGTTGAAGCCCTCCAGAAGCTCGATCCGGATTACTGGCTCGAGCTGGAAAGCACATACCGCTCTCGCAT
CCGCCAACGTCAAGACCTGCATGCCCAGCACGGAAGCAATATCCTCAACAGCCTGCCAGGCTCTGAGCTGGCGCA
AAGGGAACTGATGGAGATGGCGGTGCAGTTTCTGTGCGCGCGATACCCGCAGTACTTTGAGCTGCGAGGTCAGAC
GCTGGTGAACCATCTTCTCGCAACGGAGCATCATCTCGACGAGGTGGCGCCGCTTAGGGTCCTGCTGGATAACGT
GCCCGAGGACTTTGCTGTTCTGTTGAGGGATGAGGGGACGGGGCGGTATGTGTTGAGGGCGGGAGTGGTTTGCTC
GACGATTGGGTGGCATGTTGGGGAGAAGATGGGGATGGGGCTTTCGGAGATTCATAAGGCGGTGCCGGATTTTGA
AGAGAAGCTGAGTCTGAGCGTTGATCGGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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