© 2023 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Ophun1|1119 |
| Gene name | |
| Location | Contig_142:8394..10123 |
| Strand | - |
| Gene length (bp) | 1729 |
| Transcript length (bp) | 1542 |
| Coding sequence length (bp) | 1542 |
| Protein length (aa) | 514 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF01565 | FAD_binding_4 | FAD binding domain | 1.3E-22 | 68 | 203 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|D7UQ40|SOL5_ALTSO | Bifunctional solanapyrone synthase OS=Alternaria solani GN=sol5 PE=1 SV=1 | 43 | 505 | 5.0E-33 |
| sp|D4B1P2|A2372_ARTBC | Uncharacterized FAD-linked oxidoreductase ARB_02372 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_02372 PE=1 SV=1 | 47 | 504 | 9.0E-26 |
| sp|P08159|HDNO_ARTOX | 6-hydroxy-D-nicotine oxidase OS=Arthrobacter oxydans PE=1 SV=2 | 54 | 235 | 2.0E-13 |
| sp|Q796Y5|YGAK_BACSU | Uncharacterized FAD-linked oxidoreductase YgaK OS=Bacillus subtilis (strain 168) GN=ygaK PE=3 SV=4 | 50 | 232 | 2.0E-08 |
| sp|Q94AX4|DLD_ARATH | D-lactate dehydrogenase [cytochrome], mitochondrial OS=Arabidopsis thaliana GN=DLD PE=1 SV=1 | 68 | 259 | 8.0E-08 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|D7UQ40|SOL5_ALTSO | Bifunctional solanapyrone synthase OS=Alternaria solani GN=sol5 PE=1 SV=1 | 43 | 505 | 5.0E-33 |
| sp|D4B1P2|A2372_ARTBC | Uncharacterized FAD-linked oxidoreductase ARB_02372 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_02372 PE=1 SV=1 | 47 | 504 | 9.0E-26 |
| sp|P08159|HDNO_ARTOX | 6-hydroxy-D-nicotine oxidase OS=Arthrobacter oxydans PE=1 SV=2 | 54 | 235 | 2.0E-13 |
| sp|Q796Y5|YGAK_BACSU | Uncharacterized FAD-linked oxidoreductase YgaK OS=Bacillus subtilis (strain 168) GN=ygaK PE=3 SV=4 | 50 | 232 | 2.0E-08 |
| sp|Q94AX4|DLD_ARATH | D-lactate dehydrogenase [cytochrome], mitochondrial OS=Arabidopsis thaliana GN=DLD PE=1 SV=1 | 68 | 259 | 8.0E-08 |
| sp|Q9FUJ3|CKX2_ARATH | Cytokinin dehydrogenase 2 OS=Arabidopsis thaliana GN=CKX2 PE=1 SV=2 | 48 | 227 | 1.0E-07 |
| sp|P43485|MCRA_STRLA | Mitomycin radical oxidase OS=Streptomyces lavendulae GN=mcrA PE=1 SV=2 | 68 | 233 | 4.0E-07 |
| sp|Q54H55|Y8969_DICDI | FAD-linked oxidoreductase DDB_G0289697 OS=Dictyostelium discoideum GN=DDB_G0289697 PE=2 SV=1 | 43 | 314 | 6.0E-07 |
| sp|Q9LTS3|CKX3_ARATH | Cytokinin dehydrogenase 3 OS=Arabidopsis thaliana GN=CKX3 PE=1 SV=1 | 66 | 227 | 4.0E-06 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0050660 | flavin adenine dinucleotide binding | Yes |
| GO:0016491 | oxidoreductase activity | Yes |
| GO:0097159 | organic cyclic compound binding | No |
| GO:0003674 | molecular_function | No |
| GO:0000166 | nucleotide binding | No |
| GO:0003824 | catalytic activity | No |
| GO:0036094 | small molecule binding | No |
| GO:1901363 | heterocyclic compound binding | No |
| GO:0043167 | ion binding | No |
| GO:0005488 | binding | No |
| GO:0043168 | anion binding | No |
| GO:1901265 | nucleoside phosphate binding | No |
| SignalP signal predicted | Location | Score |
|---|---|---|
| Yes | 1 - 17 | 0.99931 |
| CAZyme category | E-value | Start | End |
|---|---|---|---|
| AA7 | 5.0E-45 | 59 | 497 |
| Orthofinder run ID | 4 |
| Orthogroup | 23 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophun1|1119 MKFTSLAAAALVGSVYGDPSKPSKGKPSGPDCCRRLSTVVPTIYYPPTSPRYNESITNRWSGNSILHPSCVVAPK SAQDVSQALRLLSKYNCPFAVKGGGHNPNPGANSIDNGVSIDLSRLDSTVLASDRSHVSLGAGGSWGHAYDAFNG SDIGFPGALCRDVSVGAVALGGGSSIFQARKGWVVDQILNYEVVLSSGRIINANERNHADLFRALKGGFTNLGIV TKIDLAAFNFGTFWDSEVVLSLNGPQANKSTMLDIISKTTVDFIANNAKDTANGLHVAVTSVAKNKTDLAILAIT NTDNVANPPAAKPIRAVPNQRANVERHGKISGYVKAISGFQPKGFRQVTASITIKNDYQTLREIWDASDAVYQAT PQNDKIAWIVELYPQPAIMQSHASTHGGNLLGLSQNPHDQIVIWLSSRWKEPSVDEIMQKASREFISAVEAIARK HGTLEPFIYVNFAASFQDPLCGYGADNVAHLRRMAAKYDPRGVFQRLMNGGFKLCEARCRRGY* |
| Coding | >Ophun1|1119 ATGAAGTTTACCAGTCTCGCGGCTGCAGCCCTCGTCGGGTCCGTCTACGGAGACCCGTCTAAGCCCTCGAAAGGG AAACCATCCGGACCTGACTGCTGCCGTCGACTATCCACCGTCGTCCCTACCATCTACTACCCCCCAACATCCCCC CGATACAACGAATCAATCACCAACCGCTGGTCCGGCAACTCAATCCTCCACCCCTCCTGCGTCGTCGCCCCCAAA TCCGCCCAAGACGTCTCCCAAGCCCTCCGCCTCCTCTCGAAATACAACTGCCCTTTCGCCGTCAAGGGCGGTGGC CACAACCCCAACCCCGGAGCCAACAGCATCGACAACGGCGTCTCCATCGATCTCAGCCGTCTGGACTCAACCGTC CTCGCCTCTGATCGCTCGCACGTTAGCCTCGGGGCGGGCGGCTCTTGGGGCCACGCGTACGATGCTTTCAACGGC AGTGATATCGGCTTCCCCGGCGCTCTTTGCAGGGATGTCAGTGTCGGCGCCGTTGCTCTCGGCGGGGGATCTTCC ATCTTTCAGGCTAGGAAGGGGTGGGTAGTTGATCAGATCCTCAACTACGAAGTCGTGCTATCATCCGGCCGCATC ATCAACGCCAACGAAAGGAACCACGCAGATCTCTTCCGCGCGCTCAAGGGCGGCTTCACGAACCTGGGCATCGTC ACCAAAATCGACCTCGCAGCCTTCAACTTCGGAACCTTTTGGGACTCGGAAGTCGTCCTCTCCCTCAACGGCCCG CAAGCCAACAAGTCAACCATGCTCGACATCATCAGCAAAACAACCGTCGACTTCATCGCCAACAACGCAAAGGAC ACGGCAAACGGCCTGCACGTTGCCGTCACATCCGTGGCGAAGAACAAGACGGACCTCGCCATCCTCGCCATCACC AACACGGATAACGTCGCCAACCCCCCCGCCGCGAAACCCATCCGCGCCGTCCCCAACCAGAGAGCCAACGTGGAG CGTCACGGCAAGATATCGGGCTACGTCAAAGCCATCAGCGGCTTCCAACCAAAGGGATTCCGCCAAGTCACAGCA AGCATAACCATCAAAAACGACTACCAAACCCTCCGCGAAATATGGGACGCCTCCGACGCAGTCTACCAAGCAACC CCCCAAAACGACAAAATCGCCTGGATCGTCGAACTCTACCCCCAACCCGCAATCATGCAATCCCACGCCTCAACC CACGGGGGAAACCTCCTCGGCCTCTCCCAAAACCCCCACGATCAAATCGTCATCTGGCTCTCCTCCCGCTGGAAA GAACCCTCCGTCGACGAAATCATGCAAAAAGCCTCCCGCGAATTCATCTCGGCCGTCGAGGCCATCGCCCGCAAA CACGGCACGCTGGAGCCCTTCATCTACGTCAACTTCGCCGCCTCGTTCCAGGATCCGCTCTGCGGGTACGGGGCC GACAACGTCGCTCATCTGCGCCGCATGGCTGCCAAGTACGATCCCAGGGGTGTCTTTCAGCGGCTTATGAACGGG GGGTTTAAGCTTTGCGAGGCTCGTTGTCGGAGGGGATATTAG |
| Transcript | >Ophun1|1119 ATGAAGTTTACCAGTCTCGCGGCTGCAGCCCTCGTCGGGTCCGTCTACGGAGACCCGTCTAAGCCCTCGAAAGGG AAACCATCCGGACCTGACTGCTGCCGTCGACTATCCACCGTCGTCCCTACCATCTACTACCCCCCAACATCCCCC CGATACAACGAATCAATCACCAACCGCTGGTCCGGCAACTCAATCCTCCACCCCTCCTGCGTCGTCGCCCCCAAA TCCGCCCAAGACGTCTCCCAAGCCCTCCGCCTCCTCTCGAAATACAACTGCCCTTTCGCCGTCAAGGGCGGTGGC CACAACCCCAACCCCGGAGCCAACAGCATCGACAACGGCGTCTCCATCGATCTCAGCCGTCTGGACTCAACCGTC CTCGCCTCTGATCGCTCGCACGTTAGCCTCGGGGCGGGCGGCTCTTGGGGCCACGCGTACGATGCTTTCAACGGC AGTGATATCGGCTTCCCCGGCGCTCTTTGCAGGGATGTCAGTGTCGGCGCCGTTGCTCTCGGCGGGGGATCTTCC ATCTTTCAGGCTAGGAAGGGGTGGGTAGTTGATCAGATCCTCAACTACGAAGTCGTGCTATCATCCGGCCGCATC ATCAACGCCAACGAAAGGAACCACGCAGATCTCTTCCGCGCGCTCAAGGGCGGCTTCACGAACCTGGGCATCGTC ACCAAAATCGACCTCGCAGCCTTCAACTTCGGAACCTTTTGGGACTCGGAAGTCGTCCTCTCCCTCAACGGCCCG CAAGCCAACAAGTCAACCATGCTCGACATCATCAGCAAAACAACCGTCGACTTCATCGCCAACAACGCAAAGGAC ACGGCAAACGGCCTGCACGTTGCCGTCACATCCGTGGCGAAGAACAAGACGGACCTCGCCATCCTCGCCATCACC AACACGGATAACGTCGCCAACCCCCCCGCCGCGAAACCCATCCGCGCCGTCCCCAACCAGAGAGCCAACGTGGAG CGTCACGGCAAGATATCGGGCTACGTCAAAGCCATCAGCGGCTTCCAACCAAAGGGATTCCGCCAAGTCACAGCA AGCATAACCATCAAAAACGACTACCAAACCCTCCGCGAAATATGGGACGCCTCCGACGCAGTCTACCAAGCAACC CCCCAAAACGACAAAATCGCCTGGATCGTCGAACTCTACCCCCAACCCGCAATCATGCAATCCCACGCCTCAACC CACGGGGGAAACCTCCTCGGCCTCTCCCAAAACCCCCACGATCAAATCGTCATCTGGCTCTCCTCCCGCTGGAAA GAACCCTCCGTCGACGAAATCATGCAAAAAGCCTCCCGCGAATTCATCTCGGCCGTCGAGGCCATCGCCCGCAAA CACGGCACGCTGGAGCCCTTCATCTACGTCAACTTCGCCGCCTCGTTCCAGGATCCGCTCTGCGGGTACGGGGCC GACAACGTCGCTCATCTGCGCCGCATGGCTGCCAAGTACGATCCCAGGGGTGTCTTTCAGCGGCTTATGAACGGG GGGTTTAAGCTTTGCGAGGCTCGTTGTCGGAGGGGATATTAG |
| Gene | >Ophun1|1119 ATGAAGTTTACCAGTCTCGCGGCTGCAGCCCTCGTCGGGTCCGTCTACGGAGACCCGTCTAAGCCCTCGAAAGGG AAACCATCCGGACCTGACTGCGTGAGTTGCTCTCCATATCCCATCAACATGACTGAAGCCAACTCTCCTCCAGTG CCGTCGACTATCCACCGTCGTCCCTACCATCTACTACCCCCCAACATCCCCCCGATACAACGAATCAATCACCAA CCGCTGGTCCGGCAACTCAATCCTCCACCCCTCCTGCGTCGTCGCCCCCAAATCCGCCCAAGACGTCTCCCAAGC CCTCCGCCTCCTCTCGAAATACAACTGCCCTTTCGCCGTCAAGGGCGGTGGCCACAACCCCAACCCCGGAGCCAA CAGCATCGACAACGGCGTCTCCATCGATCTCAGCCGTCTGGACTCAACCGTCCTCGCCTCTGATCGCTCGCACGT TAGCCTCGGGGCGGGCGGCTCTTGGGGCCACGCGTACGATGCTTTCAACGGCAGTGATATCGGCTTCCCCGGCGC TCTTTGCAGGGATGTCAGTGTCGGCGCCGTTGCTCTCGGCGGGGGATCTTCCATCTTTCAGGCTAGGAAGGGGTG GGTAGTTGATCAGATCCTCAACTACGAAGTCGTGCTATCATCCGGCCGCATCATCAACGCCAACGAAAGGAACCA CGCAGATCTCTTCCGCGCGCTCAAGGGCGGCTTCACGAACCTGGGCATCGTCACCAAAATCGACCTCGCAGCCTT CAACTTCGGAACCTTTTGGGACTCGGAAGTCGTCCTCTCCCTCAACGGCCCGCAAGCCAACAAGTCAACCATGCT CGACATCATCAGCAAAACAACCGTCGACTTCATCGCCAACAACGCAAAGGACACGGCAAACGGCCTGCACGTTGC CGTCACATCCGTGGCGAAGAACAAGACGGACCTCGCCATCCTCGCCATCACCAACACGGATAACGTCGCCAACCC CCCCGCCGCGAAACCCATCCGCGCCGTCCCCAACCAGAGAGCCAACGTGGAGCGTCACGGCAAGATATCGGGCTA CGTCAAAGCCATCAGCGGCTTCCAACCAAAGGGATTCCGGTGCGTGCGGGTCTACCGTGTCATGATGCCATCCTC AACGAGTGAATACTGACTTCATCCCCCCTTGATAGCCAAGTCACAGCAAGCATAACCATCAAAAACGACTACCAA ACCCTCCGCGAAATATGGGACGCCTCCGACGCAGTCTACCAAGCAACCCCCCAAAACGACAAAATCGCCTGGATC GTCGAACTCTACCCCCAACCCGCAATCATGCAATCCCACGCCTCAACCCACGGGGGAAACCTCCTCGGCCTCTCC CAAAACCCCCACGATCAAATCGGTAACACACCACTCCACCCCTCTCCCTCTGCAAACCCTCACTGATTCCCACCG TGAAAATATAGTCATCTGGCTCTCCTCCCGCTGGAAAGAACCCTCCGTCGACGAAATCATGCAAAAAGCCTCCCG CGAATTCATCTCGGCCGTCGAGGCCATCGCCCGCAAACACGGCACGCTGGAGCCCTTCATCTACGTCAACTTCGC CGCCTCGTTCCAGGATCCGCTCTGCGGGTACGGGGCCGACAACGTCGCTCATCTGCGCCGCATGGCTGCCAAGTA CGATCCCAGGGGTGTCTTTCAGCGGCTTATGAACGGGGGGTTTAAGCTTTGCGAGGCTCGTTGTCGGAGGGGATA TTAG |