© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ophun1|1098 |
| Gene name | |
| Location | Contig_141:10615..11001 |
| Strand | + |
| Gene length (bp) | 386 |
| Transcript length (bp) | 333 |
| Coding sequence length (bp) | 333 |
| Protein length (aa) | 111 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF09784 | L31 | Mitochondrial ribosomal protein L31 | 4.8E-46 | 10 | 110 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q9UR27|RM31_SCHPO | 54S ribosomal protein L31, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=mrpl31 PE=3 SV=1 | 1 | 110 | 1.0E-32 |
| sp|P14063|RM31_YEAST | 54S ribosomal protein L31, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MRPL31 PE=1 SV=1 | 1 | 107 | 6.0E-28 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 11 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophun1|1098 MLGPFRITNPLSGGLLWKIPWRLSKFQKRRHRQRLRAVDEVVATVNAAMAAKGQTVEALERWNAEMPTEAEMLPR DKYTIFDRKARRYRKGIHKLPKWTRVSQRVNPPGY* |
| Coding | >Ophun1|1098 ATGCTGGGCCCCTTCCGCATAACGAATCCACTCTCGGGAGGTCTTCTCTGGAAGATCCCCTGGCGACTATCCAAG TTCCAGAAGCGGCGACACCGACAGCGTCTGCGGGCTGTCGACGAGGTTGTCGCCACCGTCAACGCCGCCATGGCG GCCAAGGGCCAGACTGTCGAGGCTCTGGAGCGGTGGAATGCGGAGATGCCGACTGAGGCGGAGATGCTGCCTCGC GACAAGTATACCATCTTCGACCGGAAGGCGAGGCGGTATCGGAAGGGGATTCATAAGCTGCCGAAGTGGACGAGG GTTTCGCAGAGGGTCAATCCGCCGGGGTACTGA |
| Transcript | >Ophun1|1098 ATGCTGGGCCCCTTCCGCATAACGAATCCACTCTCGGGAGGTCTTCTCTGGAAGATCCCCTGGCGACTATCCAAG TTCCAGAAGCGGCGACACCGACAGCGTCTGCGGGCTGTCGACGAGGTTGTCGCCACCGTCAACGCCGCCATGGCG GCCAAGGGCCAGACTGTCGAGGCTCTGGAGCGGTGGAATGCGGAGATGCCGACTGAGGCGGAGATGCTGCCTCGC GACAAGTATACCATCTTCGACCGGAAGGCGAGGCGGTATCGGAAGGGGATTCATAAGCTGCCGAAGTGGACGAGG GTTTCGCAGAGGGTCAATCCGCCGGGGTACTGA |
| Gene | >Ophun1|1098 ATGCTGGGCCCCTTCCGCATAACGAATCCACTCTCGGGAGGTCTTCTCTGGAAGATCCCCTGGCGACTATCCAAG TTCCAGAAGCGGCGACACCGACAGCGTCTGCGGGCTGTCGACGAGGTTGTCGCCACCGTCAACGCCGCCATGGCG GCCAAGGGCCAGACTGTCGAGGCTCTGGAGCGGTGGAATGCGGAGATGCCGACTGAGGCGGAGATGCTGCCTCGC GACAAGTATACCATCTTCGACCGGAAGGCGAGGCGGTATCGGAAGGGGATTCATAGTGAGACTGTTGTTTACTTT GGGGTTGATGATGGGCTAATGCTTGGGTGGTAGAGCTGCCGAAGTGGACGAGGGTTTCGCAGAGGGTCAATCCGC CGGGGTACTGA |