Fungal Genomics

at Utrecht University

PFAM Domain

General information

PFAM domainPF04851
Short nameResIII
Long nameType III restriction enzyme, res subunit
Proteins with at least one of this domain33
Total domain count35
More informationPFAM website

Proteins with this PFAM domain

Note: all PFAM domains are shown for these proteins
Short name Long name E-value Start End Name
protein ID PFAM
Ophun1|1271 PF13892 DBINO DNA-binding domain 2.1E-48 589 720
PF04851 ResIII Type III restriction enzyme, res subunit 7.1E-07 829 997
PF00176 SNF2-rel_dom SNF2-related domain 4.5E-65 847 1132
PF00271 Helicase_C Helicase conserved C-terminal domain 5.8E-19 1397 1509
Ophun1|1316 PF00270 DEAD DEAD/DEAH box helicase 3.9E-46 100 271
PF04851 ResIII Type III restriction enzyme, res subunit 2.9E-06 115 263
PF00271 Helicase_C Helicase conserved C-terminal domain 4.5E-24 317 418
PF13959 DUF4217 Domain of unknown function (DUF4217) 6.5E-12 460 506
Ophun1|1543 PF07529 HSA HSA domain 1.9E-05 343 406
PF04851 ResIII Type III restriction enzyme, res subunit 1.8E-08 810 970
PF00176 SNF2-rel_dom SNF2-related domain 7.1E-70 829 1109
PF00271 Helicase_C Helicase conserved C-terminal domain 5.1E-18 1373 1485
Ophun1|1851 PF00270 DEAD DEAD/DEAH box helicase 2.7E-48 110 274
PF04851 ResIII Type III restriction enzyme, res subunit 2.6E-06 130 271
PF00271 Helicase_C Helicase conserved C-terminal domain 7.3E-24 359 454
PF08147 DBP10CT DBP10CT (NUC160) domain 4.0E-21 734 799
Ophun1|2210 PF00270 DEAD DEAD/DEAH box helicase 8.0E-48 145 314
PF04851 ResIII Type III restriction enzyme, res subunit 7.5E-05 165 308
PF00271 Helicase_C Helicase conserved C-terminal domain 2.8E-25 358 509
Ophun1|2261 PF04851 ResIII Type III restriction enzyme, res subunit 1.0E-05 297 468
PF00176 SNF2-rel_dom SNF2-related domain 6.0E-41 311 613
PF00271 Helicase_C Helicase conserved C-terminal domain 3.0E-11 825 928
Ophun1|2373 PF00176 SNF2-rel_dom SNF2-related domain 7.3E-72 332 710
PF04851 ResIII Type III restriction enzyme, res subunit 1.0E-06 399 578
PF00271 Helicase_C Helicase conserved C-terminal domain 1.1E-15 743 844
Ophun1|3008 PF00270 DEAD DEAD/DEAH box helicase 9.4E-46 182 351
PF04851 ResIII Type III restriction enzyme, res subunit 1.5E-07 194 344
PF00271 Helicase_C Helicase conserved C-terminal domain 4.5E-24 388 498
PF13959 DUF4217 Domain of unknown function (DUF4217) 5.2E-24 540 600
Ophun1|3014 PF04851 ResIII Type III restriction enzyme, res subunit 1.5E-10 134 300
PF00176 SNF2-rel_dom SNF2-related domain 2.5E-70 150 424
Ophun1|3258 PF08658 Rad54_N Rad54 N terminal 2.9E-50 1 169
PF04851 ResIII Type III restriction enzyme, res subunit 1.9E-10 192 370
PF00176 SNF2-rel_dom SNF2-related domain 1.2E-64 195 502
PF00271 Helicase_C Helicase conserved C-terminal domain 8.8E-16 542 652
Ophun1|3975 PF00270 DEAD DEAD/DEAH box helicase 3.2E-45 49 213
PF04851 ResIII Type III restriction enzyme, res subunit 4.0E-05 62 208
PF00271 Helicase_C Helicase conserved C-terminal domain 9.6E-31 250 358
Ophun1|3991 PF00270 DEAD DEAD/DEAH box helicase 2.4E-30 348 579
PF04851 ResIII Type III restriction enzyme, res subunit 6.9E-05 363 425
PF00271 Helicase_C Helicase conserved C-terminal domain 4.8E-18 677 779
Ophun1|4259 PF04851 ResIII Type III restriction enzyme, res subunit 1.9E-07 838 1023
PF00176 SNF2-rel_dom SNF2-related domain 3.8E-43 856 1155
PF00271 Helicase_C Helicase conserved C-terminal domain 3.7E-21 1212 1315
Ophun1|4341 PF04851 ResIII Type III restriction enzyme, res subunit 2.4E-05 151 323
PF00176 SNF2-rel_dom SNF2-related domain 6.8E-51 169 433
PF00271 Helicase_C Helicase conserved C-terminal domain 1.3E-18 529 640
PF14773 VIGSSK Helicase-associated putative binding domain, C-terminal 4.9E-26 762 821
Ophun1|4462 PF13625 Helicase_C_3 Helicase conserved C-terminal domain 4.5E-34 102 226
PF04851 ResIII Type III restriction enzyme, res subunit 4.0E-15 341 498
PF16203 ERCC3_RAD25_C ERCC3/RAD25/XPB C-terminal helicase 7.0E-125 524 759
PF00271 Helicase_C Helicase conserved C-terminal domain 6.1E-12 568 674
Ophun1|4478 PF18149 Helicase_PWI N-terminal helicase PWI domain 9.2E-32 287 400
PF00270 DEAD DEAD/DEAH box helicase 1.1E-27 523 697
PF04851 ResIII Type III restriction enzyme, res subunit 3.0E-14 523 697
PF00271 Helicase_C Helicase conserved C-terminal domain 2.0E-07 758 901
PF02889 Sec63 Sec63 Brl domain 3.3E-92 1023 1330
PF00270 DEAD DEAD/DEAH box helicase 2.8E-18 1374 1539
PF04851 ResIII Type III restriction enzyme, res subunit 1.8E-05 1376 1507
PF02889 Sec63 Sec63 Brl domain 4.4E-66 1859 2178
Ophun1|4536 PF04851 ResIII Type III restriction enzyme, res subunit 8.8E-10 180 340
PF00176 SNF2-rel_dom SNF2-related domain 2.4E-82 190 464
PF00271 Helicase_C Helicase conserved C-terminal domain 1.0E-16 488 599
PF09110 HAND HAND 8.5E-34 752 856
PF09111 SLIDE SLIDE 5.8E-44 914 1029
Ophun1|4616 PF00176 SNF2-rel_dom SNF2-related domain 8.4E-51 399 731
PF04851 ResIII Type III restriction enzyme, res subunit 1.5E-08 400 564
PF00097 zf-C3HC4 Zinc finger, C3HC4 type (RING finger) 1.4E-05 745 784
PF00271 Helicase_C Helicase conserved C-terminal domain 3.7E-15 823 937
Ophun1|4653 PF04851 ResIII Type III restriction enzyme, res subunit 2.0E-14 56 224
PF00270 DEAD DEAD/DEAH box helicase 5.6E-19 59 225
PF00271 Helicase_C Helicase conserved C-terminal domain 1.8E-15 421 526
PF03368 Dicer_dimer Dicer dimerisation domain 3.2E-21 593 683
Ophun1|4766 PF09416 UPF1_Zn_bind RNA helicase (UPF2 interacting domain) 4.5E-73 90 240
PF18141 UPF1_1B_dom RNA helicase UPF1, 1B domain 1.8E-33 294 388
PF04851 ResIII Type III restriction enzyme, res subunit 4.6E-06 445 516
PF13086 AAA_11 AAA domain 6.4E-23 445 546
PF13604 AAA_30 AAA domain 5.3E-12 445 643
PF13245 AAA_19 AAA domain 1.3E-10 449 641
PF13086 AAA_11 AAA domain 2.5E-31 544 647
PF13087 AAA_12 AAA domain 3.4E-59 654 850
Ophun1|5022 PF16399 Aquarius_N Intron-binding protein aquarius N-terminus 0.0E+00 39 818
PF13086 AAA_11 AAA domain 7.9E-21 830 1119
PF04851 ResIII Type III restriction enzyme, res subunit 2.2E-05 834 882
PF13087 AAA_12 AAA domain 1.4E-27 1129 1321
Ophun1|5073 PF04851 ResIII Type III restriction enzyme, res subunit 6.0E-22 142 298
PF00270 DEAD DEAD/DEAH box helicase 2.1E-17 143 303
PF00271 Helicase_C Helicase conserved C-terminal domain 1.9E-22 493 608
Ophun1|5153 PF15446 zf-PHD-like PHD/FYVE-zinc-finger like domain 1.7E-66 411 580
PF00385 Chromo Chromo (CHRromatin Organisation MOdifier) domain 2.5E-06 613 654
PF04851 ResIII Type III restriction enzyme, res subunit 3.2E-05 787 950
PF00176 SNF2-rel_dom SNF2-related domain 2.5E-53 799 1073
PF11496 HDA2-3 Class II histone deacetylase complex subunits 2 and 3 1.0E-07 1016 1229
PF00271 Helicase_C Helicase conserved C-terminal domain 4.6E-19 1101 1211
Ophun1|5490 PF04851 ResIII Type III restriction enzyme, res subunit 2.6E-09 271 455
PF00270 DEAD DEAD/DEAH box helicase 1.6E-26 272 458
PF02889 Sec63 Sec63 Brl domain 9.1E-81 783 1086
PF00270 DEAD DEAD/DEAH box helicase 7.6E-21 1132 1294
PF04851 ResIII Type III restriction enzyme, res subunit 1.9E-09 1137 1264
PF00271 Helicase_C Helicase conserved C-terminal domain 2.9E-06 1409 1496
PF02889 Sec63 Sec63 Brl domain 1.7E-44 1623 1869
Ophun1|5626 PF08880 QLQ QLQ 1.9E-10 159 192
PF07529 HSA HSA domain 3.2E-17 396 466
PF04851 ResIII Type III restriction enzyme, res subunit 1.6E-08 560 719
PF00176 SNF2-rel_dom SNF2-related domain 5.4E-78 563 856
PF00271 Helicase_C Helicase conserved C-terminal domain 1.4E-18 880 993
PF14619 SnAC Snf2-ATP coupling, chromatin remodelling complex 1.9E-16 1090 1156
PF00439 Bromodomain Bromodomain 6.6E-18 1301 1373
Ophun1|6336 PF08797 HIRAN HIRAN domain 7.2E-23 137 254
PF04851 ResIII Type III restriction enzyme, res subunit 2.1E-05 385 636
PF00176 SNF2-rel_dom SNF2-related domain 1.0E-70 390 771
PF00270 DEAD DEAD/DEAH box helicase 4.8E-07 466 613
PF00271 Helicase_C Helicase conserved C-terminal domain 8.4E-15 916 1026
Ophun1|6362 PF04851 ResIII Type III restriction enzyme, res subunit 2.1E-06 422 607
PF00176 SNF2-rel_dom SNF2-related domain 4.5E-67 438 744
PF13920 zf-C3HC4_3 Zinc finger, C3HC4 type (RING finger) 2.1E-07 779 838
PF13923 zf-C3HC4_2 Zinc finger, C3HC4 type (RING finger) 5.1E-08 781 813
PF00097 zf-C3HC4 Zinc finger, C3HC4 type (RING finger) 1.6E-07 782 833
PF13445 zf-RING_UBOX RING-type zinc-finger 2.9E-07 782 831
PF00271 Helicase_C Helicase conserved C-terminal domain 2.2E-13 969 1082
Ophun1|6388 PF04851 ResIII Type III restriction enzyme, res subunit 7.2E-06 52 231
PF00270 DEAD DEAD/DEAH box helicase 8.5E-30 53 266
PF00271 Helicase_C Helicase conserved C-terminal domain 5.6E-19 334 448
Ophun1|643 PF00270 DEAD DEAD/DEAH box helicase 1.6E-41 95 271
PF04851 ResIII Type III restriction enzyme, res subunit 1.1E-06 107 265
PF00271 Helicase_C Helicase conserved C-terminal domain 3.2E-19 319 426
Ophun1|6599 PF00270 DEAD DEAD/DEAH box helicase 1.5E-37 79 247
PF04851 ResIII Type III restriction enzyme, res subunit 8.7E-08 95 242
PF00271 Helicase_C Helicase conserved C-terminal domain 5.4E-24 285 393
Ophun1|6696 PF04851 ResIII Type III restriction enzyme, res subunit 3.1E-05 143 260
PF00271 Helicase_C Helicase conserved C-terminal domain 8.5E-17 419 534
PF03368 Dicer_dimer Dicer dimerisation domain 1.7E-18 613 694
PF00636 Ribonuclease_3 Ribonuclease III domain 4.2E-19 1034 1140
PF14622 Ribonucleas_3_3 Ribonuclease-III-like 6.6E-13 1213 1363
PF00636 Ribonuclease_3 Ribonuclease III domain 5.4E-19 1233 1346
Ophun1|7218 PF04851 ResIII Type III restriction enzyme, res subunit 2.3E-07 775 947
PF00270 DEAD DEAD/DEAH box helicase 8.2E-22 779 951
PF00271 Helicase_C Helicase conserved C-terminal domain 4.9E-14 991 1097
PF16124 RecQ_Zn_bind RecQ zinc-binding 2.6E-14 1110 1175
PF09382 RQC RQC domain 6.2E-13 1181 1292
Ophun1|7417 PF00270 DEAD DEAD/DEAH box helicase 2.3E-15 1096 1257
PF04851 ResIII Type III restriction enzyme, res subunit 1.4E-10 1098 1256
PF00271 Helicase_C Helicase conserved C-terminal domain 2.1E-07 1606 1677

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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