Fungal Genomics

at Utrecht University

PFAM Domain


General information

PFAM domainPF00562
Short nameRNA_pol_Rpb2_6
Long nameRNA polymerase Rpb2, domain 6
Proteins with at least one of this domain3
Total domain count3
More informationPFAM website

Proteins with this PFAM domain

Note: all PFAM domains are shown for these proteins
Short name Long name E-value Start End Name
protein ID PFAM
Ophun1|1341 PF04563 RNA_pol_Rpb2_1 RNA polymerase beta subunit 6.0E-50 37 479
PF04561 RNA_pol_Rpb2_2 RNA polymerase Rpb2, domain 2 4.7E-45 241 434
PF04565 RNA_pol_Rpb2_3 RNA polymerase Rpb2, domain 3 2.2E-25 508 572
PF04566 RNA_pol_Rpb2_4 RNA polymerase Rpb2, domain 4 7.0E-20 607 668
PF04567 RNA_pol_Rpb2_5 RNA polymerase Rpb2, domain 5 2.1E-24 709 780
PF00562 RNA_pol_Rpb2_6 RNA polymerase Rpb2, domain 6 6.1E-121 815 1179
PF04560 RNA_pol_Rpb2_7 RNA polymerase Rpb2, domain 7 1.3E-32 1181 1273
Ophun1|4660 PF04563 RNA_pol_Rpb2_1 RNA polymerase beta subunit 1.1E-54 43 418
PF04561 RNA_pol_Rpb2_2 RNA polymerase Rpb2, domain 2 1.4E-28 193 376
PF04565 RNA_pol_Rpb2_3 RNA polymerase Rpb2, domain 3 1.1E-19 455 518
PF04566 RNA_pol_Rpb2_4 RNA polymerase Rpb2, domain 4 9.9E-22 557 618
PF04567 RNA_pol_Rpb2_5 RNA polymerase Rpb2, domain 5 9.7E-08 639 674
PF00562 RNA_pol_Rpb2_6 RNA polymerase Rpb2, domain 6 2.7E-122 686 1062
PF04560 RNA_pol_Rpb2_7 RNA polymerase Rpb2, domain 7 2.0E-32 1064 1149
Ophun1|6936 PF04563 RNA_pol_Rpb2_1 RNA polymerase beta subunit 9.2E-34 40 433
PF04561 RNA_pol_Rpb2_2 RNA polymerase Rpb2, domain 2 3.6E-19 215 399
PF04565 RNA_pol_Rpb2_3 RNA polymerase Rpb2, domain 3 7.9E-28 489 553
PF06883 RNA_pol_Rpa2_4 RNA polymerase I, Rpa2 specific domain 1.6E-21 594 651
PF00562 RNA_pol_Rpb2_6 RNA polymerase Rpb2, domain 6 1.3E-111 700 1078
PF04560 RNA_pol_Rpb2_7 RNA polymerase Rpb2, domain 7 4.8E-12 1081 1124

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