Fungal Genomics

at Utrecht University

PFAM Domain


General information

PFAM domainPF00240
Short nameubiquitin
Long nameUbiquitin family
Proteins with at least one of this domain8
Total domain count11
More informationPFAM website

Proteins with this PFAM domain

Note: all PFAM domains are shown for these proteins
Short name Long name E-value Start End Name
protein ID PFAM
Ophun1|1230 PF00240 ubiquitin Ubiquitin family 2.2E-08 7 72
PF09668 Asp_protease Aspartyl protease 3.3E-60 189 312
PF00077 RVP Retroviral aspartyl protease 1.3E-04 215 311
PF13650 Asp_protease_2 Aspartyl protease 4.8E-12 215 302
PF13975 gag-asp_proteas gag-polyprotein putative aspartyl protease 6.2E-24 215 306
PF00627 UBA UBA/TS-N domain 2.7E-06 408 441
Ophun1|1694 PF00240 ubiquitin Ubiquitin family 5.0E-21 14 84
PF00627 UBA UBA/TS-N domain 1.5E-05 360 396
Ophun1|2959 PF00240 ubiquitin Ubiquitin family 3.0E-10 22 92
PF11976 Rad60-SLD Ubiquitin-2 like Rad60 SUMO-like 3.9E-20 23 88
Ophun1|4994 PF11781 zf-RRN7 Zinc-finger of RNA-polymerase I-specific TFIIB, Rrn7 1.8E-08 1 30
PF11976 Rad60-SLD Ubiquitin-2 like Rad60 SUMO-like 1.0E-14 457 526
PF00240 ubiquitin Ubiquitin family 4.2E-32 458 529
PF01020 Ribosomal_L40e Ribosomal L40e family 6.5E-30 533 582
Ophun1|5480 PF00240 ubiquitin Ubiquitin family 1.9E-10 7 74
PF13423 UCH_1 Ubiquitin carboxyl-terminal hydrolase 8.0E-11 109 514
PF00443 UCH Ubiquitin carboxyl-terminal hydrolase 7.1E-47 110 540
Ophun1|6558 PF11976 Rad60-SLD Ubiquitin-2 like Rad60 SUMO-like 1.6E-15 1 71
PF00240 ubiquitin Ubiquitin family 1.6E-32 3 74
PF14560 Ubiquitin_2 Ubiquitin-like domain 1.0E-03 12 69
PF13881 Rad60-SLD_2 Ubiquitin-2 like Rad60 SUMO-like 1.5E-01 15 71
PF11976 Rad60-SLD Ubiquitin-2 like Rad60 SUMO-like 1.6E-15 77 147
PF00240 ubiquitin Ubiquitin family 1.6E-32 79 150
PF14560 Ubiquitin_2 Ubiquitin-like domain 9.3E-04 87 145
PF13881 Rad60-SLD_2 Ubiquitin-2 like Rad60 SUMO-like 1.4E-01 89 147
PF11976 Rad60-SLD Ubiquitin-2 like Rad60 SUMO-like 1.6E-15 153 223
PF00240 ubiquitin Ubiquitin family 1.6E-32 155 226
PF14560 Ubiquitin_2 Ubiquitin-like domain 9.3E-04 163 221
PF13881 Rad60-SLD_2 Ubiquitin-2 like Rad60 SUMO-like 1.4E-01 165 223
PF11976 Rad60-SLD Ubiquitin-2 like Rad60 SUMO-like 1.6E-15 229 299
PF00240 ubiquitin Ubiquitin family 1.6E-32 231 302
PF14560 Ubiquitin_2 Ubiquitin-like domain 9.3E-04 239 297
PF13881 Rad60-SLD_2 Ubiquitin-2 like Rad60 SUMO-like 1.4E-01 241 299
Ophun1|6659 PF11976 Rad60-SLD Ubiquitin-2 like Rad60 SUMO-like 4.2E-08 1 64
PF00240 ubiquitin Ubiquitin family 6.1E-18 3 73
PF00627 UBA UBA/TS-N domain 3.6E-11 140 174
PF09280 XPC-binding XPC-binding domain 1.0E-24 258 313
PF00627 UBA UBA/TS-N domain 2.2E-13 333 368
Ophun1|6892 PF11976 Rad60-SLD Ubiquitin-2 like Rad60 SUMO-like 3.8E-16 1 71
PF00240 ubiquitin Ubiquitin family 3.7E-33 3 74
PF14560 Ubiquitin_2 Ubiquitin-like domain 2.7E-04 12 69
PF01599 Ribosomal_S27 Ribosomal protein S27a 6.7E-25 102 147

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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