Protein ID | Ophio5|984 |
Gene name | |
Location | scaffold_13:28479..30096 |
Strand | - |
Gene length (bp) | 1617 |
Transcript length (bp) | 1617 |
Coding sequence length (bp) | 1614 |
Protein length (aa) | 538 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF02434 | Fringe | Fringe-like | 7.8E-07 | 268 | 375 |
PF04646 | DUF604 | Protein of unknown function, DUF604 | 1.1E-06 | 317 | 406 |
GO Term | Description | Terminal node |
---|---|---|
GO:0016020 | membrane | Yes |
GO:0016757 | glycosyltransferase activity | Yes |
GO:0110165 | cellular anatomical entity | No |
GO:0003824 | catalytic activity | No |
GO:0016740 | transferase activity | No |
GO:0005575 | cellular_component | No |
GO:0003674 | molecular_function | No |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Golgi apparatus | Signal peptide|Transmembrane domain | 0.1571 | 0.1116 | 0.1689 | 0.1647 | 0.1014 | 0.0124 | 0.4503 | 0.3927 | 0.9537 | 0.0212 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 21 | 43 | 22 |
Orthofinder run ID | 4 |
Orthogroup | 179 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophio5|984 MTSLDSMTPLYRAHSPRRARSFRRFAWIAVFTVVVVIILTTATRSDLANRNQRLFDSFHPDASNKDRLSIAETLL RSEKQNGDCSVDIKRLSEIQQRYNLGDKLQYMRRVVLFNRLPGLKRKRMTMVSHKLVPEAFNLVDFSEPQDIYNS CLEPISVDVPASGLPSTVDASDFVFGVSTTYGRFKDPNSSPVNDWVHWLTDGNGRSNGGKLLLTLLNAGAKELDE AASTLHDFGIDADVLPSDPTANMAIRYVQLVPTILYSLGSSYSYKWVVLCDDDTFFPNMHALVQHFRGLDSSREM YVGTLSEDVAAVHRHGSQAFGGAGVFLSLPLAQRISRECEPSFSKLKTMKDLQGDMVLRECIYEKTETRLTTVSD LWQLDFMGDPSGFYEWGVKPLSLHHYRSWHQAKPGEMAKIAHNCGEDCILQRFQTLDNFIISGFSIAHYPWGFDF DTNQMEKSQRPLQDDIGWNFDYKFGPQRPALKRTGRKIAWELQESTVERDGSVSQVYIRSRHDSRWLNEKSEPMS DIDGVIELVWAPS |
Coding | >Ophio5|984 ATGACTTCTCTGGACTCCATGACGCCACTTTATCGCGCTCACAGCCCACGAAGAGCCCGGAGCTTCCGGAGGTTC GCTTGGATCGCCGTCTTCACCGTCGTCGTCGTCATCATTCTCACCACCGCGACCCGATCCGACCTTGCCAACCGA AATCAGCGCCTCTTCGATTCGTTCCACCCAGATGCCTCGAACAAAGATCGACTTTCGATTGCGGAGACCCTCTTG AGAAGCGAGAAGCAGAACGGTGACTGCAGCGTGGACATAAAAAGACTCTCCGAGATTCAGCAACGGTACAACTTG GGCGACAAGCTGCAATACATGCGACGAGTGGTTCTCTTCAATCGCCTGCCTGGACTCAAAAGGAAACGCATGACC ATGGTTTCTCACAAGCTCGTGCCAGAAGCCTTCAACCTCGTCGACTTTTCCGAGCCACAGGATATCTACAATAGC TGTCTCGAGCCCATCTCGGTTGATGTGCCTGCCTCAGGCCTGCCGTCTACCGTCGACGCGTCAGATTTCGTCTTT GGCGTTTCGACAACCTATGGACGCTTCAAAGATCCCAACTCTAGCCCCGTGAACGACTGGGTTCACTGGCTTACC GACGGCAATGGCCGCTCTAACGGCGGGAAGCTCCTTCTGACGCTTCTGAATGCCGGCGCGAAGGAGCTTGACGAG GCCGCCAGCACACTCCACGACTTTGGTATCGATGCCGACGTCCTTCCTTCCGATCCAACGGCAAATATGGCGATA CGATACGTACAGCTCGTCCCTACTATACTCTACTCCCTAGGTTCTTCCTACTCTTACAAGTGGGTGGTACTGTGT GACGATGATACATTTTTCCCCAATATGCACGCCCTTGTTCAGCATTTCAGAGGCCTAGACTCATCAAGGGAGATG TATGTCGGTACACTCTCCGAGGACGTTGCAGCTGTTCATAGACATGGCTCGCAAGCATTCGGTGGCGCCGGGGTC TTCTTATCGCTGCCGCTTGCCCAAAGAATTTCGAGGGAATGCGAACCCAGCTTTTCCAAGCTGAAGACGATGAAG GACTTGCAGGGAGACATGGTTCTGCGTGAATGTATCTACGAAAAGACGGAAACCCGACTAACAACAGTCTCGGAC CTGTGGCAGCTAGACTTCATGGGAGATCCCTCCGGCTTTTACGAATGGGGTGTGAAGCCTCTCTCACTGCATCAC TATCGGAGTTGGCACCAAGCCAAGCCTGGCGAAATGGCAAAAATCGCTCACAACTGCGGCGAAGACTGTATCCTT CAGCGGTTTCAAACATTAGACAACTTTATCATCTCCGGCTTTTCTATCGCTCACTACCCTTGGGGTTTCGATTTC GATACGAATCAGATGGAAAAGTCTCAACGTCCTCTACAAGACGATATAGGCTGGAACTTCGACTACAAGTTCGGA CCCCAGCGGCCGGCACTTAAGCGGACGGGCAGGAAGATAGCATGGGAACTACAAGAGTCAACAGTCGAGCGTGAT GGGTCCGTATCGCAAGTCTACATTCGCAGCCGCCATGACAGCCGATGGTTGAATGAGAAGAGTGAACCAATGAGC GATATAGATGGGGTCATCGAGTTGGTCTGGGCGCCGTCA |
Transcript | >Ophio5|984 ATGACTTCTCTGGACTCCATGACGCCACTTTATCGCGCTCACAGCCCACGAAGAGCCCGGAGCTTCCGGAGGTTC GCTTGGATCGCCGTCTTCACCGTCGTCGTCGTCATCATTCTCACCACCGCGACCCGATCCGACCTTGCCAACCGA AATCAGCGCCTCTTCGATTCGTTCCACCCAGATGCCTCGAACAAAGATCGACTTTCGATTGCGGAGACCCTCTTG AGAAGCGAGAAGCAGAACGGTGACTGCAGCGTGGACATAAAAAGACTCTCCGAGATTCAGCAACGGTACAACTTG GGCGACAAGCTGCAATACATGCGACGAGTGGTTCTCTTCAATCGCCTGCCTGGACTCAAAAGGAAACGCATGACC ATGGTTTCTCACAAGCTCGTGCCAGAAGCCTTCAACCTCGTCGACTTTTCCGAGCCACAGGATATCTACAATAGC TGTCTCGAGCCCATCTCGGTTGATGTGCCTGCCTCAGGCCTGCCGTCTACCGTCGACGCGTCAGATTTCGTCTTT GGCGTTTCGACAACCTATGGACGCTTCAAAGATCCCAACTCTAGCCCCGTGAACGACTGGGTTCACTGGCTTACC GACGGCAATGGCCGCTCTAACGGCGGGAAGCTCCTTCTGACGCTTCTGAATGCCGGCGCGAAGGAGCTTGACGAG GCCGCCAGCACACTCCACGACTTTGGTATCGATGCCGACGTCCTTCCTTCCGATCCAACGGCAAATATGGCGATA CGATACGTACAGCTCGTCCCTACTATACTCTACTCCCTAGGTTCTTCCTACTCTTACAAGTGGGTGGTACTGTGT GACGATGATACATTTTTCCCCAATATGCACGCCCTTGTTCAGCATTTCAGAGGCCTAGACTCATCAAGGGAGATG TATGTCGGTACACTCTCCGAGGACGTTGCAGCTGTTCATAGACATGGCTCGCAAGCATTCGGTGGCGCCGGGGTC TTCTTATCGCTGCCGCTTGCCCAAAGAATTTCGAGGGAATGCGAACCCAGCTTTTCCAAGCTGAAGACGATGAAG GACTTGCAGGGAGACATGGTTCTGCGTGAATGTATCTACGAAAAGACGGAAACCCGACTAACAACAGTCTCGGAC CTGTGGCAGCTAGACTTCATGGGAGATCCCTCCGGCTTTTACGAATGGGGTGTGAAGCCTCTCTCACTGCATCAC TATCGGAGTTGGCACCAAGCCAAGCCTGGCGAAATGGCAAAAATCGCTCACAACTGCGGCGAAGACTGTATCCTT CAGCGGTTTCAAACATTAGACAACTTTATCATCTCCGGCTTTTCTATCGCTCACTACCCTTGGGGTTTCGATTTC GATACGAATCAGATGGAAAAGTCTCAACGTCCTCTACAAGACGATATAGGCTGGAACTTCGACTACAAGTTCGGA CCCCAGCGGCCGGCACTTAAGCGGACGGGCAGGAAGATAGCATGGGAACTACAAGAGTCAACAGTCGAGCGTGAT GGGTCCGTATCGCAAGTCTACATTCGCAGCCGCCATGACAGCCGATGGTTGAATGAGAAGAGTGAACCAATGAGC GATATAGATGGGGTCATCGAGTTGGTCTGGGCGCCGTCATGA |
Gene | >Ophio5|984 ATGACTTCTCTGGACTCCATGACGCCACTTTATCGCGCTCACAGCCCACGAAGAGCCCGGAGCTTCCGGAGGTTC GCTTGGATCGCCGTCTTCACCGTCGTCGTCGTCATCATTCTCACCACCGCGACCCGATCCGACCTTGCCAACCGA AATCAGCGCCTCTTCGATTCGTTCCACCCAGATGCCTCGAACAAAGATCGACTTTCGATTGCGGAGACCCTCTTG AGAAGCGAGAAGCAGAACGGTGACTGCAGCGTGGACATAAAAAGACTCTCCGAGATTCAGCAACGGTACAACTTG GGCGACAAGCTGCAATACATGCGACGAGTGGTTCTCTTCAATCGCCTGCCTGGACTCAAAAGGAAACGCATGACC ATGGTTTCTCACAAGCTCGTGCCAGAAGCCTTCAACCTCGTCGACTTTTCCGAGCCACAGGATATCTACAATAGC TGTCTCGAGCCCATCTCGGTTGATGTGCCTGCCTCAGGCCTGCCGTCTACCGTCGACGCGTCAGATTTCGTCTTT GGCGTTTCGACAACCTATGGACGCTTCAAAGATCCCAACTCTAGCCCCGTGAACGACTGGGTTCACTGGCTTACC GACGGCAATGGCCGCTCTAACGGCGGGAAGCTCCTTCTGACGCTTCTGAATGCCGGCGCGAAGGAGCTTGACGAG GCCGCCAGCACACTCCACGACTTTGGTATCGATGCCGACGTCCTTCCTTCCGATCCAACGGCAAATATGGCGATA CGATACGTACAGCTCGTCCCTACTATACTCTACTCCCTAGGTTCTTCCTACTCTTACAAGTGGGTGGTACTGTGT GACGATGATACATTTTTCCCCAATATGCACGCCCTTGTTCAGCATTTCAGAGGCCTAGACTCATCAAGGGAGATG TATGTCGGTACACTCTCCGAGGACGTTGCAGCTGTTCATAGACATGGCTCGCAAGCATTCGGTGGCGCCGGGGTC TTCTTATCGCTGCCGCTTGCCCAAAGAATTTCGAGGGAATGCGAACCCAGCTTTTCCAAGCTGAAGACGATGAAG GACTTGCAGGGAGACATGGTTCTGCGTGAATGTATCTACGAAAAGACGGAAACCCGACTAACAACAGTCTCGGAC CTGTGGCAGCTAGACTTCATGGGAGATCCCTCCGGCTTTTACGAATGGGGTGTGAAGCCTCTCTCACTGCATCAC TATCGGAGTTGGCACCAAGCCAAGCCTGGCGAAATGGCAAAAATCGCTCACAACTGCGGCGAAGACTGTATCCTT CAGCGGTTTCAAACATTAGACAACTTTATCATCTCCGGCTTTTCTATCGCTCACTACCCTTGGGGTTTCGATTTC GATACGAATCAGATGGAAAAGTCTCAACGTCCTCTACAAGACGATATAGGCTGGAACTTCGACTACAAGTTCGGA CCCCAGCGGCCGGCACTTAAGCGGACGGGCAGGAAGATAGCATGGGAACTACAAGAGTCAACAGTCGAGCGTGAT GGGTCCGTATCGCAAGTCTACATTCGCAGCCGCCATGACAGCCGATGGTTGAATGAGAAGAGTGAACCAATGAGC GATATAGATGGGGTCATCGAGTTGGTCTGGGCGCCGTCATGA |