Protein ID | Ophio5|975 |
Gene name | |
Location | scaffold_13:14003..14763 |
Strand | + |
Gene length (bp) | 760 |
Transcript length (bp) | 702 |
Coding sequence length (bp) | 699 |
Protein length (aa) | 233 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF01183 | Glyco_hydro_25 | Glycosyl hydrolases family 25 | 7.7E-33 | 26 | 208 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|D4ANU4|LYS_ARTBC | N,O-diacetylmuramidase OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_05911 PE=1 SV=1 | 15 | 230 | 2.0E-52 |
sp|P00721|LYS_CHASP | N,O-diacetylmuramidase OS=Chalaropsis sp. PE=1 SV=1 | 22 | 227 | 4.0E-50 |
sp|P25310|LYSM1_STRGL | Lysozyme M1 OS=Streptomyces globisporus GN=acm PE=1 SV=1 | 19 | 204 | 7.0E-43 |
sp|P26836|LYS_CLOPE | Probable autolytic lysozyme OS=Clostridium perfringens (strain 13 / Type A) GN=lyc PE=3 SV=2 | 22 | 206 | 6.0E-11 |
sp|P34020|LYS_CLOAB | Autolytic lysozyme OS=Clostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM B-1787) GN=lyc PE=1 SV=1 | 22 | 205 | 1.0E-09 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|D4ANU4|LYS_ARTBC | N,O-diacetylmuramidase OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_05911 PE=1 SV=1 | 15 | 230 | 2.0E-52 |
sp|P00721|LYS_CHASP | N,O-diacetylmuramidase OS=Chalaropsis sp. PE=1 SV=1 | 22 | 227 | 4.0E-50 |
sp|P25310|LYSM1_STRGL | Lysozyme M1 OS=Streptomyces globisporus GN=acm PE=1 SV=1 | 19 | 204 | 7.0E-43 |
sp|P26836|LYS_CLOPE | Probable autolytic lysozyme OS=Clostridium perfringens (strain 13 / Type A) GN=lyc PE=3 SV=2 | 22 | 206 | 6.0E-11 |
sp|P34020|LYS_CLOAB | Autolytic lysozyme OS=Clostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM B-1787) GN=lyc PE=1 SV=1 | 22 | 205 | 1.0E-09 |
sp|P76421|YEGX_ECOLI | Uncharacterized protein YegX OS=Escherichia coli (strain K12) GN=yegX PE=3 SV=2 | 13 | 224 | 2.0E-09 |
sp|Q8X7H0|YEGX_ECO57 | Uncharacterized protein YegX OS=Escherichia coli O157:H7 GN=yegX PE=3 SV=2 | 13 | 158 | 3.0E-09 |
sp|Q8FFY2|YEGX_ECOL6 | Uncharacterized protein YegX OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) GN=yegX PE=3 SV=2 | 13 | 224 | 7.0E-09 |
GO Term | Description | Terminal node |
---|---|---|
GO:0003796 | lysozyme activity | Yes |
GO:0009253 | peptidoglycan catabolic process | Yes |
GO:0016998 | cell wall macromolecule catabolic process | Yes |
GO:0009987 | cellular process | No |
GO:0043170 | macromolecule metabolic process | No |
GO:0061783 | peptidoglycan muralytic activity | No |
GO:0071704 | organic substance metabolic process | No |
GO:0008150 | biological_process | No |
GO:0044260 | cellular macromolecule metabolic process | No |
GO:0003674 | molecular_function | No |
GO:0044237 | cellular metabolic process | No |
GO:0008152 | metabolic process | No |
GO:0000270 | peptidoglycan metabolic process | No |
GO:0044036 | cell wall macromolecule metabolic process | No |
GO:1901564 | organonitrogen compound metabolic process | No |
GO:0006027 | glycosaminoglycan catabolic process | No |
GO:0044265 | cellular macromolecule catabolic process | No |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | No |
GO:0016787 | hydrolase activity | No |
GO:0009056 | catabolic process | No |
GO:1901135 | carbohydrate derivative metabolic process | No |
GO:1901565 | organonitrogen compound catabolic process | No |
GO:0044248 | cellular catabolic process | No |
GO:0016798 | hydrolase activity, acting on glycosyl bonds | No |
GO:0009057 | macromolecule catabolic process | No |
GO:0006022 | aminoglycan metabolic process | No |
GO:1901575 | organic substance catabolic process | No |
GO:0006807 | nitrogen compound metabolic process | No |
GO:0030203 | glycosaminoglycan metabolic process | No |
GO:0003824 | catalytic activity | No |
GO:1901136 | carbohydrate derivative catabolic process | No |
GO:0006026 | aminoglycan catabolic process | No |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Extracellular | Signal peptide | 0.0866 | 0.0437 | 0.9195 | 0.078 | 0.0777 | 0.0334 | 0.158 | 0.2398 | 0.0791 | 0.0021 |
SignalP signal predicted | Location | Score |
---|---|---|
Yes | 1 - 24 | 0.999704 |
CAZyme category | E-value | Start | End |
---|---|---|---|
GH25 | 3.7E-39 | 26 | 206 |
Orthofinder run ID | 4 |
Orthogroup | 8274 |
Change Orthofinder run |
Species | Protein ID |
---|---|
Ophiocordyceps kimflemingae | Ophio5|975 (this protein) |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophio5|975 MKSFQAVTTVLAAIISTATAAVQGFDVSSAQSSVDFAKAFAEGARFAIIQATQGSGHVDPKFNQFYDDAADAGLI RGGYHIARPDKAFGGNQAKFFLQNGGGWTNEGRTLPGMVMLTGKHHPETHPCSGLSPKEMEHWIIEFVEVYRAST GIYPMLYTTTGWWKECTQNTVNLLARSLLVISDYSESIGELPAGWKSYTFWQYSDKSPWADAAYVFNGDISQLNM TAKFGYPN |
Coding | >Ophio5|975 ATGAAGTCCTTTCAAGCAGTTACGACTGTACTCGCCGCCATAATCAGCACCGCCACTGCCGCAGTGCAAGGCTTC GACGTATCGAGTGCCCAGAGCAGCGTCGACTTTGCCAAGGCCTTCGCGGAAGGAGCTCGCTTTGCCATTATCCAG GCGACGCAGGGGTCTGGCCACGTAGATCCCAAGTTCAACCAATTCTACGATGACGCTGCGGATGCCGGCTTGATT CGCGGTGGCTATCATATTGCTCGACCGGATAAGGCATTCGGGGGCAACCAAGCCAAGTTCTTCCTTCAGAACGGT GGCGGCTGGACAAACGAGGGCAGAACCTTGCCTGGGATGGTTATGTTGACAGGAAAACACCATCCCGAGACTCAT CCCTGCTCTGGACTCTCACCCAAGGAAATGGAGCATTGGATCATTGAGTTTGTCGAGGTTTACCGCGCCTCAACC GGCATCTACCCTATGCTTTACACTACGACAGGATGGTGGAAGGAGTGCACCCAAAACACGGTCAATCTTCTCGCC CGATCTCTCCTCGTCATTTCAGATTACTCAGAGTCTATTGGAGAGTTGCCCGCGGGCTGGAAGTCCTATACGTTC TGGCAATACTCCGACAAATCTCCCTGGGCTGACGCCGCTTACGTCTTTAACGGCGATATATCACAGCTTAATATG ACTGCGAAATTTGGTTACCCCAAT |
Transcript | >Ophio5|975 ATGAAGTCCTTTCAAGCAGTTACGACTGTACTCGCCGCCATAATCAGCACCGCCACTGCCGCAGTGCAAGGCTTC GACGTATCGAGTGCCCAGAGCAGCGTCGACTTTGCCAAGGCCTTCGCGGAAGGAGCTCGCTTTGCCATTATCCAG GCGACGCAGGGGTCTGGCCACGTAGATCCCAAGTTCAACCAATTCTACGATGACGCTGCGGATGCCGGCTTGATT CGCGGTGGCTATCATATTGCTCGACCGGATAAGGCATTCGGGGGCAACCAAGCCAAGTTCTTCCTTCAGAACGGT GGCGGCTGGACAAACGAGGGCAGAACCTTGCCTGGGATGGTTATGTTGACAGGAAAACACCATCCCGAGACTCAT CCCTGCTCTGGACTCTCACCCAAGGAAATGGAGCATTGGATCATTGAGTTTGTCGAGGTTTACCGCGCCTCAACC GGCATCTACCCTATGCTTTACACTACGACAGGATGGTGGAAGGAGTGCACCCAAAACACGGTCAATCTTCTCGCC CGATCTCTCCTCGTCATTTCAGATTACTCAGAGTCTATTGGAGAGTTGCCCGCGGGCTGGAAGTCCTATACGTTC TGGCAATACTCCGACAAATCTCCCTGGGCTGACGCCGCTTACGTCTTTAACGGCGATATATCACAGCTTAATATG ACTGCGAAATTTGGTTACCCCAATTGA |
Gene | >Ophio5|975 ATGAAGTCCTTTCAAGCAGTTACGACTGTACTCGCCGCCATAATCAGCACCGCCACTGCCGCAGTGCAAGGCTTC GACGTATCGAGTGCCCAGAGCAGCGTCGACTTTGCCAAGGCCTTCGCGGAAGGAGCTCGCTTTGCCATTATCCAG GTAAGCGCGGCCGCGAACTCGAGGTGTATCGCACAATCAGCTGACGAAGATGAACAAGGCGACGCAGGGGTCTGG CCACGTAGATCCCAAGTTCAACCAATTCTACGATGACGCTGCGGATGCCGGCTTGATTCGCGGTGGCTATCATAT TGCTCGACCGGATAAGGCATTCGGGGGCAACCAAGCCAAGTTCTTCCTTCAGAACGGTGGCGGCTGGACAAACGA GGGCAGAACCTTGCCTGGGATGGTTATGTTGACAGGAAAACACCATCCCGAGACTCATCCCTGCTCTGGACTCTC ACCCAAGGAAATGGAGCATTGGATCATTGAGTTTGTCGAGGTTTACCGCGCCTCAACCGGCATCTACCCTATGCT TTACACTACGACAGGATGGTGGAAGGAGTGCACCCAAAACACGGTCAATCTTCTCGCCCGATCTCTCCTCGTCAT TTCAGATTACTCAGAGTCTATTGGAGAGTTGCCCGCGGGCTGGAAGTCCTATACGTTCTGGCAATACTCCGACAA ATCTCCCTGGGCTGACGCCGCTTACGTCTTTAACGGCGATATATCACAGCTTAATATGACTGCGAAATTTGGTTA CCCCAATTGA |