© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ophio5|958 |
| Gene name | |
| Location | scaffold_129:33844..35135 |
| Strand | - |
| Gene length (bp) | 1291 |
| Transcript length (bp) | 1119 |
| Coding sequence length (bp) | 1116 |
| Protein length (aa) | 372 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF01370 | Epimerase | NAD dependent epimerase/dehydratase family | 1.3E-47 | 6 | 281 |
| PF16363 | GDP_Man_Dehyd | GDP-mannose 4,6 dehydratase | 4.2E-47 | 7 | 343 |
| PF01073 | 3Beta_HSD | 3-beta hydroxysteroid dehydrogenase/isomerase family | 2.2E-15 | 7 | 169 |
| PF02719 | Polysacc_synt_2 | Polysaccharide biosynthesis protein | 1.2E-11 | 6 | 128 |
| PF04321 | RmlD_sub_bind | RmlD substrate binding domain | 1.3E-11 | 5 | 169 |
| PF08659 | KR | KR domain | 6.7E-08 | 4 | 136 |
| PF00106 | adh_short | short chain dehydrogenase | 8.2E-08 | 5 | 129 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q9Y7X5|UGE1_SCHPO | UDP-glucose 4-epimerase uge1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=uge1 PE=1 SV=1 | 4 | 355 | 2.0E-133 |
| sp|P40801|GAL10_PACTA | Bifunctional protein GAL10 OS=Pachysolen tannophilus GN=GAL10 PE=2 SV=1 | 6 | 356 | 3.0E-133 |
| sp|P04397|GAL10_YEAST | Bifunctional protein GAL10 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=GAL10 PE=1 SV=2 | 6 | 356 | 2.0E-132 |
| sp|Q9HDU3|GAL10_SCHPO | Bifunctional protein gal10 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=gal10 PE=3 SV=1 | 6 | 356 | 3.0E-131 |
| sp|P09609|GAL10_KLULA | Bifunctional protein GAL10 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=GAL10 PE=2 SV=2 | 6 | 356 | 7.0E-128 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q9Y7X5|UGE1_SCHPO | UDP-glucose 4-epimerase uge1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=uge1 PE=1 SV=1 | 4 | 355 | 2.0E-133 |
| sp|P40801|GAL10_PACTA | Bifunctional protein GAL10 OS=Pachysolen tannophilus GN=GAL10 PE=2 SV=1 | 6 | 356 | 3.0E-133 |
| sp|P04397|GAL10_YEAST | Bifunctional protein GAL10 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=GAL10 PE=1 SV=2 | 6 | 356 | 2.0E-132 |
| sp|Q9HDU3|GAL10_SCHPO | Bifunctional protein gal10 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=gal10 PE=3 SV=1 | 6 | 356 | 3.0E-131 |
| sp|P09609|GAL10_KLULA | Bifunctional protein GAL10 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=GAL10 PE=2 SV=2 | 6 | 356 | 7.0E-128 |
| sp|Q8R059|GALE_MOUSE | UDP-glucose 4-epimerase OS=Mus musculus GN=Gale PE=1 SV=1 | 6 | 355 | 2.0E-117 |
| sp|Q5R8D0|GALE_PONAB | UDP-glucose 4-epimerase OS=Pongo abelii GN=GALE PE=2 SV=1 | 6 | 355 | 3.0E-116 |
| sp|Q3T105|GALE_BOVIN | UDP-glucose 4-epimerase OS=Bos taurus GN=GALE PE=2 SV=2 | 6 | 355 | 6.0E-116 |
| sp|Q14376|GALE_HUMAN | UDP-glucose 4-epimerase OS=Homo sapiens GN=GALE PE=1 SV=2 | 6 | 355 | 3.0E-115 |
| sp|Q553X7|GALE_DICDI | UDP-glucose 4-epimerase OS=Dictyostelium discoideum GN=galE PE=1 SV=1 | 6 | 355 | 3.0E-113 |
| sp|P09147|GALE_ECOLI | UDP-glucose 4-epimerase OS=Escherichia coli (strain K12) GN=galE PE=1 SV=1 | 6 | 355 | 2.0E-112 |
| sp|Q56093|GALE_SALTI | UDP-glucose 4-epimerase OS=Salmonella typhi GN=galE PE=3 SV=2 | 6 | 355 | 9.0E-112 |
| sp|P22715|GALE_SALTY | UDP-glucose 4-epimerase OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) GN=galE PE=3 SV=2 | 6 | 355 | 2.0E-111 |
| sp|P18645|GALE_RAT | UDP-glucose 4-epimerase OS=Rattus norvegicus GN=Gale PE=2 SV=1 | 6 | 354 | 2.0E-111 |
| sp|P55180|GALE_BACSU | UDP-glucose 4-epimerase OS=Bacillus subtilis (strain 168) GN=galE PE=3 SV=1 | 6 | 357 | 3.0E-111 |
| sp|Q9SN58|UGE5_ARATH | UDP-glucose 4-epimerase 5 OS=Arabidopsis thaliana GN=UGE5 PE=1 SV=3 | 1 | 355 | 4.0E-109 |
| sp|Q9F7D4|GALE_YERPE | UDP-glucose 4-epimerase OS=Yersinia pestis GN=galE PE=3 SV=1 | 6 | 355 | 8.0E-109 |
| sp|Q57301|GALE_YEREN | UDP-glucose 4-epimerase OS=Yersinia enterocolitica GN=galE PE=3 SV=1 | 5 | 355 | 1.0E-107 |
| sp|P24325|GALE_HAEIN | UDP-glucose 4-epimerase OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=galE PE=3 SV=2 | 6 | 356 | 5.0E-107 |
| sp|O65781|GALE2_CYATE | UDP-glucose 4-epimerase GEPI48 OS=Cyamopsis tetragonoloba PE=2 SV=1 | 1 | 355 | 1.0E-106 |
| sp|Q6K2E1|UGE4_ORYSJ | UDP-glucose 4-epimerase 4 OS=Oryza sativa subsp. japonica GN=UGE-4 PE=2 SV=1 | 5 | 355 | 2.0E-105 |
| sp|Q9CNY5|GALE_PASMU | UDP-glucose 4-epimerase OS=Pasteurella multocida (strain Pm70) GN=galE PE=3 SV=1 | 6 | 356 | 7.0E-105 |
| sp|Q9W0P5|GALE_DROME | UDP-glucose 4-epimerase OS=Drosophila melanogaster GN=Gale PE=1 SV=1 | 1 | 355 | 1.0E-104 |
| sp|Q9T0A7|UGE2_ARATH | UDP-glucose 4-epimerase 2 OS=Arabidopsis thaliana GN=UGE2 PE=1 SV=1 | 5 | 352 | 1.0E-104 |
| sp|P56997|GALE_NEIMA | UDP-glucose 4-epimerase OS=Neisseria meningitidis serogroup A / serotype 4A (strain Z2491) GN=galE PE=3 SV=1 | 6 | 355 | 6.0E-104 |
| sp|P56985|GALE_NEIMB | UDP-glucose 4-epimerase OS=Neisseria meningitidis serogroup B (strain MC58) GN=galE PE=3 SV=1 | 6 | 355 | 6.0E-104 |
| sp|Q8LNZ3|UGE1_ORYSJ | UDP-glucose 4-epimerase 1 OS=Oryza sativa subsp. japonica GN=UGE-1 PE=2 SV=1 | 5 | 355 | 6.0E-104 |
| sp|Q59678|GALE_MANHA | UDP-glucose 4-epimerase OS=Mannheimia haemolytica GN=galE PE=3 SV=1 | 6 | 356 | 3.0E-103 |
| sp|Q6ZDJ7|UGE2_ORYSJ | UDP-glucose 4-epimerase 2 OS=Oryza sativa subsp. japonica GN=UGE-2 PE=2 SV=1 | 2 | 355 | 2.0E-102 |
| sp|P35673|GALE_ERWAM | UDP-glucose 4-epimerase OS=Erwinia amylovora GN=galE PE=3 SV=1 | 5 | 354 | 7.0E-102 |
| sp|P56986|GALE_NEIMC | UDP-glucose 4-epimerase OS=Neisseria meningitidis serogroup C GN=galE PE=3 SV=1 | 6 | 355 | 7.0E-102 |
| sp|Q9C7W7|UGE4_ARATH | UDP-glucose 4-epimerase 4 OS=Arabidopsis thaliana GN=UGE4 PE=1 SV=1 | 3 | 359 | 2.0E-100 |
| sp|Q05026|GALE_NEIGO | UDP-glucose 4-epimerase OS=Neisseria gonorrhoeae GN=galE PE=3 SV=1 | 5 | 355 | 8.0E-100 |
| sp|B0M3E8|UGE1_PEA | Bifunctional UDP-glucose 4-epimerase and UDP-xylose 4-epimerase 1 OS=Pisum sativum GN=UGE1 PE=1 SV=2 | 6 | 359 | 7.0E-97 |
| sp|Q43070|GALE1_PEA | UDP-glucose 4-epimerase OS=Pisum sativum GN=GALE PE=2 SV=1 | 6 | 359 | 5.0E-96 |
| sp|O65780|GALE1_CYATE | UDP-glucose 4-epimerase GEPI42 OS=Cyamopsis tetragonoloba PE=2 SV=1 | 1 | 356 | 5.0E-95 |
| sp|E8MF10|GALE_BIFL2 | UDP-glucose 4-epimerase OS=Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 / JCM 1217 / NCTC 11818 / E194b) GN=lnpD PE=1 SV=1 | 5 | 357 | 2.0E-94 |
| sp|Q42605|UGE1_ARATH | Bifunctional UDP-glucose 4-epimerase and UDP-xylose 4-epimerase 1 OS=Arabidopsis thaliana GN=UGE1 PE=1 SV=2 | 5 | 358 | 9.0E-94 |
| sp|Q652A8|UGE3_ORYSJ | UDP-glucose 4-epimerase 3 OS=Oryza sativa subsp. japonica GN=UGE-3 PE=2 SV=1 | 2 | 355 | 5.0E-91 |
| sp|Q8LDN8|UGE3_ARATH | Bifunctional UDP-glucose 4-epimerase and UDP-xylose 4-epimerase 3 OS=Arabidopsis thaliana GN=UGE3 PE=1 SV=1 | 5 | 359 | 5.0E-91 |
| sp|Q9KDV3|GALE_BACHD | UDP-glucose 4-epimerase OS=Bacillus halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125) GN=galE PE=3 SV=1 | 6 | 358 | 7.0E-77 |
| sp|P96995|GALE_STRMU | UDP-glucose 4-epimerase OS=Streptococcus mutans serotype c (strain ATCC 700610 / UA159) GN=galE PE=3 SV=2 | 6 | 355 | 7.0E-66 |
| sp|O84903|GALE_LACCA | UDP-glucose 4-epimerase OS=Lactobacillus casei GN=galE PE=3 SV=1 | 5 | 355 | 3.0E-65 |
| sp|P33119|GALE_CORDI | UDP-glucose 4-epimerase OS=Corynebacterium diphtheriae (strain ATCC 700971 / NCTC 13129 / Biotype gravis) GN=galE PE=3 SV=2 | 6 | 350 | 6.0E-64 |
| sp|Q45291|GALE_CORGL | UDP-glucose 4-epimerase OS=Corynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / JCM 1318 / LMG 3730 / NCIMB 10025) GN=galE PE=3 SV=2 | 6 | 347 | 4.0E-62 |
| sp|P21977|GALE_STRTR | UDP-glucose 4-epimerase OS=Streptococcus thermophilus GN=galE PE=3 SV=1 | 6 | 355 | 5.0E-61 |
| sp|Q8H0B2|ARAE3_ORYSJ | Probable UDP-arabinose 4-epimerase 3 OS=Oryza sativa subsp. japonica GN=UEL-3 PE=2 SV=1 | 3 | 355 | 4.0E-60 |
| sp|Q8H0B6|ARAE2_ORYSJ | Probable UDP-arabinose 4-epimerase 2 OS=Oryza sativa subsp. japonica GN=UEL-2 PE=2 SV=1 | 1 | 355 | 7.0E-59 |
| sp|Q9SA77|ARAE1_ARATH | UDP-arabinose 4-epimerase 1 OS=Arabidopsis thaliana GN=MUR4 PE=1 SV=1 | 3 | 355 | 1.0E-58 |
| sp|Q7WTB1|GALE_LACHE | UDP-glucose 4-epimerase OS=Lactobacillus helveticus GN=galE PE=2 SV=1 | 6 | 358 | 1.0E-58 |
| sp|Q59745|EXOB_RHILT | UDP-glucose 4-epimerase OS=Rhizobium leguminosarum bv. trifolii GN=exoB PE=3 SV=1 | 1 | 353 | 4.0E-58 |
| sp|Q9FI17|ARAE4_ARATH | Putative UDP-arabinose 4-epimerase 4 OS=Arabidopsis thaliana GN=At5g44480 PE=3 SV=1 | 3 | 355 | 1.0E-57 |
| sp|Q8H930|ARAE1_ORYSJ | Probable UDP-arabinose 4-epimerase 1 OS=Oryza sativa subsp. japonica GN=UEL-1 PE=2 SV=2 | 3 | 364 | 8.0E-57 |
| sp|Q9SUN3|ARAE3_ARATH | Probable UDP-arabinose 4-epimerase 3 OS=Arabidopsis thaliana GN=At4g20460 PE=2 SV=3 | 3 | 355 | 2.0E-56 |
| sp|P26503|EXOB_RHIME | UDP-glucose 4-epimerase OS=Rhizobium meliloti (strain 1021) GN=exoB PE=3 SV=1 | 1 | 354 | 3.0E-56 |
| sp|O64749|ARAE2_ARATH | Putative UDP-arabinose 4-epimerase 2 OS=Arabidopsis thaliana GN=At2g34850 PE=2 SV=3 | 3 | 355 | 4.0E-55 |
| sp|P13226|GALE_STRLI | UDP-glucose 4-epimerase OS=Streptomyces lividans GN=galE PE=3 SV=2 | 4 | 355 | 2.0E-53 |
| sp|Q59083|EXOB_AZOBR | UDP-glucose 4-epimerase OS=Azospirillum brasilense GN=exoB PE=3 SV=1 | 6 | 331 | 6.0E-50 |
| sp|P56600|GAL10_CANMA | Bifunctional protein GAL10 (Fragment) OS=Candida maltosa GN=GAL10 PE=3 SV=1 | 1 | 150 | 1.0E-47 |
| sp|P75517|GALE_MYCPN | UDP-glucose 4-epimerase OS=Mycoplasma pneumoniae (strain ATCC 29342 / M129) GN=galE PE=3 SV=1 | 6 | 343 | 1.0E-36 |
| sp|P45602|GALE_KLEPN | UDP-glucose 4-epimerase (Fragment) OS=Klebsiella pneumoniae GN=galE PE=3 SV=1 | 6 | 134 | 1.0E-34 |
| sp|Q57664|GALE_METJA | Putative UDP-glucose 4-epimerase OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=MJ0211 PE=3 SV=1 | 6 | 351 | 7.0E-31 |
| sp|P47364|GALE_MYCGE | UDP-glucose 4-epimerase OS=Mycoplasma genitalium (strain ATCC 33530 / G-37 / NCTC 10195) GN=galE PE=3 SV=1 | 6 | 350 | 1.0E-27 |
| sp|P39630|RMLB_BACSU | dTDP-glucose 4,6-dehydratase OS=Bacillus subtilis (strain 168) GN=rfbB PE=1 SV=1 | 5 | 353 | 2.0E-17 |
| sp|O22141|GAE4_ARATH | UDP-glucuronate 4-epimerase 4 OS=Arabidopsis thaliana GN=GAE4 PE=1 SV=1 | 5 | 347 | 5.0E-15 |
| sp|A6QLW2|TGDS_BOVIN | dTDP-D-glucose 4,6-dehydratase OS=Bos taurus GN=TGDS PE=2 SV=1 | 6 | 356 | 4.0E-14 |
| sp|O95455|TGDS_HUMAN | dTDP-D-glucose 4,6-dehydratase OS=Homo sapiens GN=TGDS PE=1 SV=1 | 6 | 356 | 5.0E-14 |
| sp|Q2SYH7|WBIB_BURTA | dTDP-L-rhamnose 4-epimerase OS=Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301) GN=wbiB PE=1 SV=1 | 6 | 348 | 8.0E-14 |
| sp|O81312|GAE3_ARATH | UDP-glucuronate 4-epimerase 3 OS=Arabidopsis thaliana GN=GAE3 PE=2 SV=1 | 5 | 347 | 2.0E-13 |
| sp|Q8VDR7|TGDS_MOUSE | dTDP-D-glucose 4,6-dehydratase OS=Mus musculus GN=Tgds PE=2 SV=2 | 6 | 356 | 2.0E-13 |
| sp|Q9LIS3|GAE6_ARATH | UDP-glucuronate 4-epimerase 6 OS=Arabidopsis thaliana GN=GAE6 PE=1 SV=1 | 5 | 347 | 3.0E-13 |
| sp|P39858|CAPI_STAAU | Protein CapI OS=Staphylococcus aureus GN=capI PE=3 SV=1 | 6 | 347 | 3.0E-13 |
| sp|Q9LPC1|GAE2_ARATH | UDP-glucuronate 4-epimerase 2 OS=Arabidopsis thaliana GN=GAE2 PE=2 SV=1 | 5 | 347 | 5.0E-13 |
| sp|P44914|RMLB_HAEIN | dTDP-glucose 4,6-dehydratase OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=rffG PE=3 SV=1 | 6 | 347 | 6.0E-13 |
| sp|Q58455|Y1055_METJA | Uncharacterized protein MJ1055 OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=MJ1055 PE=3 SV=1 | 1 | 351 | 7.0E-13 |
| sp|Q9S642|RMLB_NEIMA | dTDP-glucose 4,6-dehydratase OS=Neisseria meningitidis serogroup A / serotype 4A (strain Z2491) GN=rfbB1 PE=3 SV=1 | 6 | 351 | 2.0E-12 |
| sp|A0QSK6|RMLB_MYCS2 | dTDP-glucose 4,6-dehydratase OS=Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155) GN=rmlB PE=1 SV=1 | 6 | 358 | 3.0E-12 |
| sp|P26391|RMLB_SALTY | dTDP-glucose 4,6-dehydratase OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) GN=rfbB PE=1 SV=1 | 6 | 353 | 3.0E-12 |
| sp|Q04871|YCL2_ECO11 | Uncharacterized 37.6 kDa protein in cld 5'region OS=Escherichia coli O111:H- PE=3 SV=1 | 7 | 350 | 4.0E-12 |
| sp|Q9M0B6|GAE1_ARATH | UDP-glucuronate 4-epimerase 1 OS=Arabidopsis thaliana GN=GAE1 PE=1 SV=1 | 5 | 347 | 5.0E-12 |
| sp|P55462|RFBB_RHISN | Probable dTDP-glucose 4,6-dehydratase OS=Rhizobium sp. (strain NGR234) GN=NGR_a03580 PE=3 SV=1 | 6 | 359 | 8.0E-12 |
| sp|Q9STI6|GAE5_ARATH | UDP-glucuronate 4-epimerase 5 OS=Arabidopsis thaliana GN=GAE5 PE=2 SV=1 | 5 | 347 | 9.0E-12 |
| sp|P55293|RMLB1_ECOLX | dTDP-glucose 4,6-dehydratase OS=Escherichia coli GN=rfbB PE=3 SV=1 | 6 | 347 | 2.0E-11 |
| sp|P55294|RMLB_NEIMB | dTDP-glucose 4,6-dehydratase OS=Neisseria meningitidis serogroup B (strain MC58) GN=rfbB1 PE=3 SV=2 | 6 | 351 | 2.0E-11 |
| sp|P37759|RMLB1_ECOLI | dTDP-glucose 4,6-dehydratase 1 OS=Escherichia coli (strain K12) GN=rfbB PE=3 SV=2 | 6 | 353 | 4.0E-11 |
| sp|Q6E7F4|RMLB2_ECOLX | dTDP-glucose 4,6-dehydratase OS=Escherichia coli GN=rmlB PE=1 SV=1 | 6 | 357 | 1.0E-10 |
| sp|A6NKP2|D42E2_HUMAN | Putative short-chain dehydrogenase/reductase family 42E member 2 OS=Homo sapiens GN=SDR42E2 PE=3 SV=3 | 6 | 292 | 1.0E-10 |
| sp|P14169|RFBE_SALTI | CDP-paratose 2-epimerase OS=Salmonella typhi GN=rfbE PE=1 SV=2 | 6 | 139 | 2.0E-10 |
| sp|B0RVL0|RMLB_XANCB | dTDP-glucose 4,6-dehydratase OS=Xanthomonas campestris pv. campestris (strain B100) GN=rfbB PE=3 SV=1 | 3 | 351 | 1.0E-09 |
| sp|Q4R7R1|D42E1_MACFA | Short-chain dehydrogenase/reductase family 42E member 1 OS=Macaca fascicularis GN=SDR42E1 PE=2 SV=1 | 5 | 272 | 1.0E-09 |
| sp|Q7BJX9|GNE_PLESH | UDP-N-acetylglucosamine 4-epimerase OS=Plesiomonas shigelloides GN=wbgU PE=1 SV=1 | 5 | 347 | 3.0E-09 |
| sp|P9WN65|RMLB_MYCTU | dTDP-glucose 4,6-dehydratase OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=rmlB PE=1 SV=1 | 6 | 358 | 3.0E-09 |
| sp|P9WN64|RMLB_MYCTO | dTDP-glucose 4,6-dehydratase OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) GN=rmlB PE=3 SV=1 | 6 | 358 | 3.0E-09 |
| sp|P0C7J0|RMLB_XANCP | dTDP-glucose 4,6-dehydratase OS=Xanthomonas campestris pv. campestris (strain ATCC 33913 / DSM 3586 / NCPPB 528 / LMG 568 / P 25) GN=rfbB PE=3 SV=1 | 3 | 351 | 4.0E-09 |
| sp|Q9ZAE8|RMLB_ACTS5 | dTDP-glucose 4,6-dehydratase OS=Actinoplanes sp. (strain ATCC 31044 / CBS 674.73 / SE50/110) GN=acbB PE=3 SV=2 | 6 | 351 | 4.0E-09 |
| sp|Q9L9E8|NOVT_STRNV | dTDP-glucose 4,6-dehydratase OS=Streptomyces niveus GN=novT PE=3 SV=1 | 6 | 133 | 1.0E-08 |
| sp|Q8X7P7|GNU_ECO57 | N-acetyl-alpha-D-glucosaminyl-diphospho-ditrans,octacis-undecaprenol 4-epimerase OS=Escherichia coli O157:H7 GN=gnu PE=1 SV=1 | 61 | 242 | 1.0E-08 |
| sp|Q5PQX0|UXS1_RAT | UDP-glucuronic acid decarboxylase 1 OS=Rattus norvegicus GN=Uxs1 PE=1 SV=1 | 6 | 341 | 3.0E-08 |
| sp|Q91XL3|UXS1_MOUSE | UDP-glucuronic acid decarboxylase 1 OS=Mus musculus GN=Uxs1 PE=1 SV=1 | 6 | 341 | 3.0E-08 |
| sp|Q5R885|UXS1_PONAB | UDP-glucuronic acid decarboxylase 1 OS=Pongo abelii GN=UXS1 PE=2 SV=1 | 6 | 341 | 3.0E-08 |
| sp|Q8NBZ7|UXS1_HUMAN | UDP-glucuronic acid decarboxylase 1 OS=Homo sapiens GN=UXS1 PE=1 SV=1 | 6 | 341 | 3.0E-08 |
| sp|Q54WS6|TGDS_DICDI | dTDP-D-glucose 4,6-dehydratase OS=Dictyostelium discoideum GN=tgds PE=3 SV=1 | 1 | 170 | 9.0E-08 |
| sp|Q8VZC0|UXS1_ARATH | UDP-glucuronic acid decarboxylase 1 OS=Arabidopsis thaliana GN=UXS1 PE=1 SV=1 | 6 | 350 | 9.0E-08 |
| sp|Q6DF08|UXS1_XENTR | UDP-glucuronic acid decarboxylase 1 OS=Xenopus tropicalis GN=uxs1 PE=2 SV=1 | 6 | 341 | 1.0E-07 |
| sp|Q9LMU0|FCL2_ARATH | Putative GDP-L-fucose synthase 2 OS=Arabidopsis thaliana GN=GER2 PE=1 SV=1 | 6 | 351 | 1.0E-07 |
| sp|P26397|RFBG_SALTY | CDP-glucose 4,6-dehydratase OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) GN=rfbG PE=1 SV=1 | 6 | 349 | 2.0E-07 |
| sp|Q8WUS8|D42E1_HUMAN | Short-chain dehydrogenase/reductase family 42E member 1 OS=Homo sapiens GN=SDR42E1 PE=2 SV=2 | 5 | 292 | 2.0E-07 |
| sp|Q6GMI9|UXS1_DANRE | UDP-glucuronic acid decarboxylase 1 OS=Danio rerio GN=uxs1 PE=2 SV=2 | 6 | 341 | 3.0E-07 |
| sp|Q32L94|D42E1_BOVIN | Short-chain dehydrogenase/reductase family 42E member 1 OS=Bos taurus GN=SDR42E1 PE=2 SV=2 | 5 | 303 | 6.0E-07 |
| sp|Q5UR12|TGDS_MIMIV | Putative dTDP-D-glucose 4,6-dehydratase OS=Acanthamoeba polyphaga mimivirus GN=MIMI_R141 PE=3 SV=1 | 6 | 355 | 8.0E-07 |
| sp|Q67WR2|FCL1_ORYSJ | Probable GDP-L-fucose synthase 1 OS=Oryza sativa subsp. japonica GN=Os06g0652400 PE=2 SV=1 | 4 | 351 | 1.0E-06 |
| sp|Q56872|GM4D_YERE8 | GDP-mannose 4,6-dehydratase OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain NCTC 13174 / 8081) GN=gmd PE=3 SV=2 | 7 | 344 | 2.0E-06 |
| sp|P55579|Y4NG_RHISN | Uncharacterized protein y4nG OS=Rhizobium sp. (strain NGR234) GN=NGR_a02350 PE=3 SV=1 | 3 | 181 | 3.0E-06 |
| sp|Q9HTB6|RMD_PSEAE | GDP-6-deoxy-D-mannose reductase OS=Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=rmd PE=1 SV=1 | 55 | 340 | 4.0E-06 |
| sp|Q04973|VIPB_SALTI | Vi polysaccharide biosynthesis protein VipB/TviC OS=Salmonella typhi GN=vipB PE=3 SV=1 | 7 | 347 | 4.0E-06 |
| sp|A0R5C5|GALE_MYCS2 | UDP-glucose 4-epimerase OS=Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155) GN=MSMEG_6142 PE=1 SV=2 | 6 | 353 | 7.0E-06 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016616 | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | Yes |
| GO:0006694 | steroid biosynthetic process | Yes |
| GO:0003854 | 3-beta-hydroxy-delta5-steroid dehydrogenase activity | Yes |
| GO:1901360 | organic cyclic compound metabolic process | No |
| GO:0009058 | biosynthetic process | No |
| GO:0008150 | biological_process | No |
| GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors | No |
| GO:0044238 | primary metabolic process | No |
| GO:0016491 | oxidoreductase activity | No |
| GO:0016229 | steroid dehydrogenase activity | No |
| GO:1901576 | organic substance biosynthetic process | No |
| GO:0008152 | metabolic process | No |
| GO:0003674 | molecular_function | No |
| GO:0033764 | steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | No |
| GO:0008202 | steroid metabolic process | No |
| GO:0071704 | organic substance metabolic process | No |
| GO:0006629 | lipid metabolic process | No |
| GO:0008610 | lipid biosynthetic process | No |
| GO:1901362 | organic cyclic compound biosynthetic process | No |
| GO:0003824 | catalytic activity | No |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Cytoplasm | Peroxisomal targeting signal | 0.6182 | 0.3659 | 0.0155 | 0.1517 | 0.1632 | 0.027 | 0.1134 | 0.1847 | 0.1497 | 0.275 |
| Orthofinder run ID | 4 |
| Orthogroup | 2926 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophio5|958 MAVGTVLVTGGTGYIGSFTTLALLQHGYDVVIIDSLYNSSEVALDRIELLCGRRPAFHNADVTDEKALDEVFAKH PAIDSVIHFAALKAVGESAEIPLEYYRVNVGGSIALLRSMERNNVTNIVFSSSATVYGDATRFEGMIPIPEHCPI GPTNTYGRTKSTIEDVVTDFITAQRNNLKKAGKPYEQWNGALLRYFNPCGAHPSGIMGEDPQGVPYNLLPLLGKV ATGDRDKLLVFGEDYASDDGTAIRDYIHVVDLAKGHLVALNYLREKKPGVKAWNLGSGRGSTVFQMINAFSAVVG RKLSYEVVARRPGDVLNLTANPSLANKELGWKTEIPMEKACEDLWRWVKNNPQGYRQEPPAELLAAVKSSKA |
| Coding | >Ophio5|958 ATGGCTGTTGGGACGGTGCTAGTTACTGGCGGCACGGGCTACATCGGCTCCTTCACCACCCTCGCCCTCCTCCAG CACGGCTACGACGTCGTCATCATCGACAGCCTCTACAACTCGTCCGAGGTCGCCCTCGATCGAATTGAGCTGCTG TGCGGCCGCAGACCGGCCTTTCACAATGCCGACGTGACGGACGAGAAGGCGTTGGACGAGGTGTTCGCCAAACAC CCGGCAATCGACAGCGTCATCCACTTCGCCGCTCTCAAGGCCGTTGGAGAGTCGGCCGAGATCCCCCTCGAATAC TACCGTGTCAACGTCGGCGGCAGCATCGCCCTGCTGCGCTCCATGGAGCGTAACAACGTCACCAACATCGTCTTC TCATCTTCGGCCACCGTCTATGGCGACGCCACCCGCTTCGAAGGCATGATCCCCATTCCCGAGCACTGCCCCATC GGCCCGACAAATACCTACGGCCGCACAAAGTCCACCATCGAAGACGTCGTGACCGACTTCATCACTGCCCAGCGT AACAATCTTAAGAAGGCCGGTAAGCCCTATGAGCAATGGAATGGCGCCCTGCTGCGTTACTTTAATCCTTGCGGT GCTCATCCCAGTGGCATCATGGGCGAGGATCCCCAGGGTGTGCCCTACAACCTGCTGCCCCTGCTTGGCAAGGTC GCCACTGGTGACCGTGATAAGCTGCTCGTCTTTGGCGAAGACTACGCCTCCGATGACGGAACCGCCATTCGCGAC TACATCCACGTCGTCGATCTGGCCAAGGGCCACCTCGTCGCTCTCAACTACCTCCGTGAGAAGAAGCCTGGCGTC AAGGCGTGGAACTTGGGCTCGGGCCGCGGCAGCACCGTCTTTCAGATGATTAACGCATTCAGTGCCGTCGTCGGT CGCAAGCTGTCCTACGAGGTCGTCGCCCGCAGGCCGGGCGATGTGCTGAACCTCACGGCGAACCCGTCGCTGGCC AATAAAGAGCTGGGCTGGAAGACGGAGATCCCGATGGAGAAGGCTTGCGAGGACCTGTGGCGATGGGTCAAGAAC AACCCACAGGGGTATCGACAGGAACCCCCGGCGGAGCTCCTGGCGGCTGTCAAGTCGTCCAAAGCC |
| Transcript | >Ophio5|958 ATGGCTGTTGGGACGGTGCTAGTTACTGGCGGCACGGGCTACATCGGCTCCTTCACCACCCTCGCCCTCCTCCAG CACGGCTACGACGTCGTCATCATCGACAGCCTCTACAACTCGTCCGAGGTCGCCCTCGATCGAATTGAGCTGCTG TGCGGCCGCAGACCGGCCTTTCACAATGCCGACGTGACGGACGAGAAGGCGTTGGACGAGGTGTTCGCCAAACAC CCGGCAATCGACAGCGTCATCCACTTCGCCGCTCTCAAGGCCGTTGGAGAGTCGGCCGAGATCCCCCTCGAATAC TACCGTGTCAACGTCGGCGGCAGCATCGCCCTGCTGCGCTCCATGGAGCGTAACAACGTCACCAACATCGTCTTC TCATCTTCGGCCACCGTCTATGGCGACGCCACCCGCTTCGAAGGCATGATCCCCATTCCCGAGCACTGCCCCATC GGCCCGACAAATACCTACGGCCGCACAAAGTCCACCATCGAAGACGTCGTGACCGACTTCATCACTGCCCAGCGT AACAATCTTAAGAAGGCCGGTAAGCCCTATGAGCAATGGAATGGCGCCCTGCTGCGTTACTTTAATCCTTGCGGT GCTCATCCCAGTGGCATCATGGGCGAGGATCCCCAGGGTGTGCCCTACAACCTGCTGCCCCTGCTTGGCAAGGTC GCCACTGGTGACCGTGATAAGCTGCTCGTCTTTGGCGAAGACTACGCCTCCGATGACGGAACCGCCATTCGCGAC TACATCCACGTCGTCGATCTGGCCAAGGGCCACCTCGTCGCTCTCAACTACCTCCGTGAGAAGAAGCCTGGCGTC AAGGCGTGGAACTTGGGCTCGGGCCGCGGCAGCACCGTCTTTCAGATGATTAACGCATTCAGTGCCGTCGTCGGT CGCAAGCTGTCCTACGAGGTCGTCGCCCGCAGGCCGGGCGATGTGCTGAACCTCACGGCGAACCCGTCGCTGGCC AATAAAGAGCTGGGCTGGAAGACGGAGATCCCGATGGAGAAGGCTTGCGAGGACCTGTGGCGATGGGTCAAGAAC AACCCACAGGGGTATCGACAGGAACCCCCGGCGGAGCTCCTGGCGGCTGTCAAGTCGTCCAAAGCCTAG |
| Gene | >Ophio5|958 ATGGCTGTTGGGACGGTGCTAGTTACTGGGTACGGCTACGGCAGACTCGTCCGTCTCCTTTCCTTCTACCCTCGC TGACCCCAGCAGCGGCACGGGCTACATCGGCTCCTTCACCACCCTCGCCCTCCTCCAGCACGGCTACGACGTCGT CATCATCGACAGCCTCTACAACTCGTCCGAGGTCGCCCTCGATCGAATTGAGCTGCTGTGCGGCCGCAGACCGGC CTTTCACAATGCCGACGTGACGGACGAGAAGGCGTTGGACGAGGTGTTCGCCAAACACCCGGCAATCGACAGCGT CATCCACTTCGCCGCTCTCAAGGCACGTGTGACCTGCTCATGCGACGCTTTGCGCCCTGCCTTGCCGCTGACCGT GAGCCCCCGCAGGCCGTTGGAGAGTCGGCCGAGATCCCCCTCGAATACTACCGTGTCAACGTCGGCGGCAGCATC GCCCTGCTGCGCTCCATGGAGCGTAACAACGTCACCAACATCGTCTTCTCATCTTCGGCCACCGTCTATGGCGAC GCCACCCGCTTCGAAGGCATGATCCCCATTCCCGAGCACTGCCCCATCGGCCCGACAAATACCTACGGCCGCACA AAGTCCACCATCGAAGACGTCGTGACCGACTTCATCACTGCCCAGCGTAACAATCTTAAGAAGGCCGGTAAGCCC TATGAGCAATGGAATGGCGCCCTGCTGCGTTACTTTAATCCTTGCGGTGCTCATCCCAGTGGCATCATGGGCGAG GATCCCCAGGGTGTGCCCTACAACCTGCTGCCCCTGCTTGGCAAGGTCGCCACTGGTGACCGTGATAAGCTGCTC GTCTTTGGCGAAGGTGGGCTTACAGTCCAGACCCCAATGATTCCCTTGTTGACCAGCGCCAGACTACGCCTCCGA TGACGGAACCGCCATTCGCGACTACATCCACGTCGTCGATCTGGCCAAGGGCCACCTCGTCGCTCTCAACTACCT CCGTGAGAAGAAGCCTGGCGTCAAGGCGTGGAACTTGGGCTCGGGCCGCGGCAGCACCGTCTTTCAGATGATTAA CGCATTCAGTGCCGTCGTCGGTCGCAAGCTGTCCTACGAGGTCGTCGCCCGCAGGCCGGGCGATGTGCTGAACCT CACGGCGAACCCGTCGCTGGCCAATAAAGAGCTGGGCTGGAAGACGGAGATCCCGATGGAGAAGGCTTGCGAGGA CCTGTGGCGATGGGTCAAGAACAACCCACAGGGGTATCGACAGGAACCCCCGGCGGAGCTCCTGGCGGCTGTCAA GTCGTCCAAAGCCTAG |