Fungal Genomics

at Utrecht University

General Properties

Protein ID	Ophio5\|939
Gene name
Location	scaffold_1281:732..2020
Strand	-
Gene length (bp)	1288
Transcript length (bp)	972
Coding sequence length (bp)	969
Protein length (aa)	323

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF10455	BAR_2	Bin/amphiphysin/Rvs domain for vesicular trafficking	3.7E-56	17	300
PF03114	BAR	BAR domain	4.7E-17	22	304

Swissprot hits

Swissprot ID	Swissprot Description	Start	End	E-value
sp\|P40531\|GVP36_YEAST	Protein GVP36 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=GVP36 PE=1 SV=1	1	289	3.0E-34
sp\|Q10253\|MUG64_SCHPO	Meiotically up-regulated gene 64 protein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=mug64 PE=1 SV=3	15	300	3.0E-22
sp\|Q06523\|YP148_YEAST	Uncharacterized protein YPR148C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YPR148C PE=1 SV=1	22	233	4.0E-09

GO

GO Term	Description	Terminal node
GO:0005737	cytoplasm	Yes
GO:0005515	protein binding	Yes
GO:0005488	binding	No
GO:0110165	cellular anatomical entity	No
GO:0005575	cellular_component	No
GO:0003674	molecular_function	No

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 11	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ophio5\|939 MDFKNFGKNLSNFGAQLTPFASRTFQFTKEQLLGQADGKTQLPPDYIDLEKKVEALKQAHQKIIAVTSHYSNESY DYPPNIKETFQDLGRTVSEKVGLLSAATSTTEAQAALVAPPSAKPQPKTFNHAIARASLSSSQLLHHNHSGAGEE DPLATALEKYALAMERVGEARLVQDSQIQSRFLAGWHTTLNTNLSFAARARKSVEKSRLNLDTIKNQAQGTAFKL GSQGYSASQHEELELSPQAQEDIEKAEDDFVAQTEEAIGVMKNVLDSPEPLHNLVALIAAQIEYHKKAYEVLSDL APAIDRLQTDQEDVYRKSRDDTS
Coding	>Ophio5\|939 ATGGATTTTAAAAATTTTGGGAAAAATCTGTCGAATTTTGGCGCGCAGCTCACGCCTTTTGCTTCGCGAACATTC CAATTCACTAAGGAGCAGCTTCTTGGTCAGGCAGACGGCAAGACCCAACTCCCCCCCGACTATATTGATCTCGAA AAAAAGGTGGAAGCCCTAAAGCAGGCCCACCAGAAGATCATCGCCGTAACCTCGCATTATTCGAACGAATCATAC GACTACCCCCCAAACATTAAGGAAACTTTTCAGGATCTCGGCCGTACTGTTAGCGAGAAAGTCGGTCTTCTGTCG GCTGCAACGTCCACAACGGAAGCTCAAGCGGCCCTGGTTGCACCTCCTTCCGCAAAGCCACAGCCGAAGACATTT AACCATGCCATTGCCCGGGCTAGCTTATCAAGCAGCCAGCTTTTGCATCACAACCACAGCGGCGCAGGCGAAGAA GACCCCTTAGCCACCGCTCTCGAGAAATATGCTCTCGCCATGGAGCGTGTCGGTGAGGCCCGACTTGTTCAGGAC TCTCAGATTCAGAGCCGCTTTCTAGCTGGCTGGCACACTACTTTGAATACCAATCTATCGTTCGCGGCGCGCGCT CGAAAAAGTGTCGAGAAGTCAAGATTAAACCTCGACACTATCAAGAATCAGGCCCAGGGGACCGCTTTTAAACTG GGTAGTCAGGGCTATTCAGCCAGTCAGCATGAGGAGCTGGAACTCAGCCCACAGGCTCAAGAAGACATCGAAAAA GCTGAAGATGACTTCGTCGCCCAAACTGAGGAGGCTATCGGTGTCATGAAAAACGTCCTCGACTCACCTGAACCA CTTCACAACCTAGTGGCACTTATCGCCGCCCAAATTGAATATCATAAGAAGGCATATGAAGTGTTAAGCGATCTC GCACCTGCTATCGACAGATTGCAGACAGACCAGGAGGATGTTTATCGAAAAAGCCGTGACGACACGTCT
Transcript	>Ophio5\|939 ATGGATTTTAAAAATTTTGGGAAAAATCTGTCGAATTTTGGCGCGCAGCTCACGCCTTTTGCTTCGCGAACATTC CAATTCACTAAGGAGCAGCTTCTTGGTCAGGCAGACGGCAAGACCCAACTCCCCCCCGACTATATTGATCTCGAA AAAAAGGTGGAAGCCCTAAAGCAGGCCCACCAGAAGATCATCGCCGTAACCTCGCATTATTCGAACGAATCATAC GACTACCCCCCAAACATTAAGGAAACTTTTCAGGATCTCGGCCGTACTGTTAGCGAGAAAGTCGGTCTTCTGTCG GCTGCAACGTCCACAACGGAAGCTCAAGCGGCCCTGGTTGCACCTCCTTCCGCAAAGCCACAGCCGAAGACATTT AACCATGCCATTGCCCGGGCTAGCTTATCAAGCAGCCAGCTTTTGCATCACAACCACAGCGGCGCAGGCGAAGAA GACCCCTTAGCCACCGCTCTCGAGAAATATGCTCTCGCCATGGAGCGTGTCGGTGAGGCCCGACTTGTTCAGGAC TCTCAGATTCAGAGCCGCTTTCTAGCTGGCTGGCACACTACTTTGAATACCAATCTATCGTTCGCGGCGCGCGCT CGAAAAAGTGTCGAGAAGTCAAGATTAAACCTCGACACTATCAAGAATCAGGCCCAGGGGACCGCTTTTAAACTG GGTAGTCAGGGCTATTCAGCCAGTCAGCATGAGGAGCTGGAACTCAGCCCACAGGCTCAAGAAGACATCGAAAAA GCTGAAGATGACTTCGTCGCCCAAACTGAGGAGGCTATCGGTGTCATGAAAAACGTCCTCGACTCACCTGAACCA CTTCACAACCTAGTGGCACTTATCGCCGCCCAAATTGAATATCATAAGAAGGCATATGAAGTGTTAAGCGATCTC GCACCTGCTATCGACAGATTGCAGACAGACCAGGAGGATGTTTATCGAAAAAGCCGTGACGACACGTCTTAA
Gene	>Ophio5\|939 ATGGATTTTAAAAATTTTGGGAAAAATCTGTCGTGAGTCTATGAATTGTGACGTTCCGGATCGTTCACAGCAGTA TCACGGCGTAGTTGGACTCGAGCGTGTTGACTGTCTTGTTTGGTAAAAGGAATTTTGGCGCGCAGCTCACGCCTT TTGCTTCGCGAACATTCCAATTCACTAAGGAGCAGCTTCTTGGTCAGGCAGACGGCAAGGTGAGCATTGGTAATA TAAGCCATATTGCTAAGATGGTCGACTTATCTGCTCCACTGACAGACCCAACTCCCCCCCGACTATATTGATCTC GAAAAAAAGGTGGAAGCCCTAAAGCAGGCCCACCAGAAGATCATCGCCGTAACGCATGTCAGGGGATTCAAGTTC ATGTCCGCTATGCTAACTCTGTGAAGCTCGCATTATTCGAACGAATCATACGACTACCCCCCAAACATTAAGGAA ACTTTTCAGGATCTCGGCCGTACTGTTAGCGAGAAAGTCGGTCTTCTGTCGGCTGCAACGTCCACAACGGAAGCT CAAGCGGCCCTGGTTGCACCTCCTTCCGCAAAGCCACAGCCGAAGACATTTAACCATGCCATTGCCCGGGCTAGC TTATCAAGCAGCCAGCTTTTGCATCACAACCACAGCGGCGCAGGCGAAGAAGACCCCTTAGCCACCGCTCTCGAG AAATATGCTCTCGCCATGGAGCGTGTCGGTGAGGCCCGACTTGTTCAGGACTCTCAGATTCAGAGCCGCTTTCTA GCTGGCTGGCACACTACTTTGAATACCAATCTATCGTTCGCGGCGCGCGCTCGAAAAAGTGTCGAGAAGTCAAGA TTAAACCTCGACACTATCAAGAATCAGGCCCAGGGGACCGCTTTTAAACTGGGTAGTCAGGGCTATTCAGCCAGT CAGCATGAGGAGCTGGAACTCAGCCCACAGGCTCAAGAAGACATCGAAAAAGCTGAAGATGACTTCGTCGCCCAA ACTGAGGAGGCTATCGGTGTCATGAAAAACGTCAGGCTATAAGAATTCTCATCTATTGGGGGCATCCTATTAGCT AATACTAGGCAGGTCCTCGACTCACCTGAACCACTTCACAACCTAGTGGCACTTATCGCCGCCCAAATTGAATAT CATAAGAAGGCATATGAAGTGTTAAGCGATCTCGCACCTGCTATCGACAGATTGCAGACAGACCAGGAGGTAAAA TCTTCAGTGCCCCTCTAATGTCACTATTGAACGACTTGCTTATATAGCTCAGGATGTTTATCGAAAAAGCCGTGA CGACACGTCTTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail