Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|917
Gene name
Locationscaffold_1277:394..1533
Strand+
Gene length (bp)1139
Transcript length (bp)876
Coding sequence length (bp)873
Protein length (aa) 291

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF17172 GST_N_4 Glutathione S-transferase N-terminal domain 3.7E-14 59 157
PF17171 GST_C_6 Glutathione S-transferase, C-terminal domain 6.1E-12 201 275
PF10568 Tom37 Outer mitochondrial membrane transport complex protein 8.4E-11 61 180

Swissprot hits

(None)

GO

GO Term Description Terminal node
GO:0001401 SAM complex Yes
GO:0098796 membrane protein complex No
GO:0032991 protein-containing complex No
GO:0005575 cellular_component No
GO:0098798 mitochondrial protein-containing complex No
GO:0005742 mitochondrial outer membrane translocase complex No
GO:0098799 outer mitochondrial membrane protein complex No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 17 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|917
MADRSGLFAVPAPVRALFRLVPLRVYESEPMPCRAPSEMRSRPRLHVYGVDGQGLSCDPACLMWQTFLRIAHVDV
DLVTSSPLASPDGSLPFLLPSSTEPKADMPLTGSAMARYVRGHASSGSGSEQPAADLEVYLALLTQHIRPAWNYA
LFSHPANESLLAELYLSSRSAIPLSLRLPSLRVAMDIKPAKQPPQDVVSDARRAFRALDTLLACAPDSHNNPWFF
GAQRPGLFDAHVFSYTYPLLKNNPPLPWADDFSLRDCLVGCPRLSAHCDNLYASCWPPGDADDRAV
Coding >Ophio5|917
ATGGCCGATCGGAGCGGCCTCTTCGCCGTGCCGGCTCCCGTCCGCGCCCTCTTCCGTCTCGTGCCCCTGCGCGTC
TACGAGTCGGAGCCGATGCCATGTCGTGCCCCGTCTGAGATGCGTTCGCGGCCCAGGCTGCATGTCTACGGCGTT
GATGGTCAAGGGCTGAGCTGTGATCCGGCGTGCCTCATGTGGCAGACCTTTCTACGCATCGCCCATGTCGACGTC
GACCTCGTCACTTCTTCCCCCCTCGCCTCCCCGGACGGCTCTCTTCCTTTCCTCCTCCCCTCCAGCACAGAGCCC
AAGGCCGACATGCCGCTGACGGGTTCCGCCATGGCCCGTTACGTTCGCGGTCATGCCTCCTCCGGCTCCGGTTCG
GAGCAGCCGGCCGCGGACCTCGAGGTCTATCTGGCCCTCTTGACGCAACACATTCGTCCAGCATGGAATTATGCC
TTATTCTCTCATCCCGCCAACGAGTCCCTCCTCGCTGAGCTTTACCTCTCTTCCCGCTCGGCCATCCCCCTCTCC
CTACGGCTACCTTCCCTCCGCGTCGCCATGGATATCAAGCCGGCCAAGCAGCCGCCCCAAGATGTCGTCTCCGAC
GCACGCAGAGCCTTTCGCGCTCTTGATACCCTTCTCGCCTGCGCACCGGACAGTCATAATAACCCTTGGTTCTTC
GGCGCCCAGCGCCCGGGCCTCTTCGACGCTCACGTCTTCTCCTACACCTATCCCCTACTCAAGAATAATCCTCCC
CTTCCCTGGGCCGACGACTTTTCTCTGAGAGATTGCCTCGTCGGATGCCCTCGTCTATCTGCCCACTGCGACAAC
TTGTATGCCTCTTGCTGGCCCCCTGGCGACGCAGACGACCGTGCCGTA
Transcript >Ophio5|917
ATGGCCGATCGGAGCGGCCTCTTCGCCGTGCCGGCTCCCGTCCGCGCCCTCTTCCGTCTCGTGCCCCTGCGCGTC
TACGAGTCGGAGCCGATGCCATGTCGTGCCCCGTCTGAGATGCGTTCGCGGCCCAGGCTGCATGTCTACGGCGTT
GATGGTCAAGGGCTGAGCTGTGATCCGGCGTGCCTCATGTGGCAGACCTTTCTACGCATCGCCCATGTCGACGTC
GACCTCGTCACTTCTTCCCCCCTCGCCTCCCCGGACGGCTCTCTTCCTTTCCTCCTCCCCTCCAGCACAGAGCCC
AAGGCCGACATGCCGCTGACGGGTTCCGCCATGGCCCGTTACGTTCGCGGTCATGCCTCCTCCGGCTCCGGTTCG
GAGCAGCCGGCCGCGGACCTCGAGGTCTATCTGGCCCTCTTGACGCAACACATTCGTCCAGCATGGAATTATGCC
TTATTCTCTCATCCCGCCAACGAGTCCCTCCTCGCTGAGCTTTACCTCTCTTCCCGCTCGGCCATCCCCCTCTCC
CTACGGCTACCTTCCCTCCGCGTCGCCATGGATATCAAGCCGGCCAAGCAGCCGCCCCAAGATGTCGTCTCCGAC
GCACGCAGAGCCTTTCGCGCTCTTGATACCCTTCTCGCCTGCGCACCGGACAGTCATAATAACCCTTGGTTCTTC
GGCGCCCAGCGCCCGGGCCTCTTCGACGCTCACGTCTTCTCCTACACCTATCCCCTACTCAAGAATAATCCTCCC
CTTCCCTGGGCCGACGACTTTTCTCTGAGAGATTGCCTCGTCGGATGCCCTCGTCTATCTGCCCACTGCGACAAC
TTGTATGCCTCTTGCTGGCCCCCTGGCGACGCAGACGACCGTGCCGTATGA
Gene >Ophio5|917
ATGGCCGATCGGAGCGGCCTCTTCGCCGTGCCGGCTCCCGTCCGCGCCCTCTTCCGTCTCGTGCCCCTGCGCGTC
TACGAGTCGGAGCCGATGCCATGTCGTGCCCCGTCTGAGATGCGTTCGCGGCCCAGGCTGCATGTCTACGGCGTT
GATGGTCAAGGGCTGAGCTGTGATCCGGCGTGCCTCATGTGGCAGGTATGACGATTTTTTTTGGGGGGTTTTTTT
TTTCAATAAAGATTTTGGAAAAAAAAATTTACGATATTTTTTTTTTTGAGGGGGGGCTTGCGCCGAAGAGGTTCT
CCTTCTTGACGGGAACGGGTTGGCTGGGTGTGGGAGAGGATGTTGATCACCAAATGATGCTTCCCTGACTTACAC
ACTGGTTAGACCTTTCTACGCATCGCCCATGTCGACGTCGACCTCGTCACTTCTTCCCCCCTCGCCTCCCCGGAC
GGCTCTCTTCCTTTCCTCCTCCCCTCCAGCACAGAGCCCAAGGCCGACATGCCGCTGACGGGTTCCGCCATGGCC
CGTTACGTTCGCGGTCATGCCTCCTCCGGCTCCGGTTCGGAGCAGCCGGCCGCGGACCTCGAGGTCTATCTGGCC
CTCTTGACGCAACACATTCGTCCAGCATGGGTTCGTCATCTGTCTCTTCCTTTCTCCTCTTCTTTCCCCCCCCTC
TTGGGCTGACGAGTAGCATGCTTCTTTAGAATTATGCCTTATTCTCTCATCCCGCCAACGAGTCCCTCCTCGCTG
AGCTTTACCTCTCTTCCCGCTCGGCCATCCCCCTCTCCCTACGGCTACCTTCCCTCCGCGTCGCCATGGATATCA
AGCCGGCCAAGCAGCCGCCCCAAGATGTCGTCTCCGACGCACGCAGAGCCTTTCGCGCTCTTGATACCCTTCTCG
CCTGCGCACCGGACAGTCATAATAACCCTTGGTTCTTCGGCGCCCAGCGCCCGGGCCTCTTCGACGCTCACGTCT
TCTCCTACACCTATCCCCTACTCAAGAATAATCCTCCCCTTCCCTGGGCCGACGACTTTTCTCTGAGAGATTGCC
TCGTCGGATGCCCTCGTCTATCTGCCCACTGCGACAACTTGTATGCCTCTTGCTGGCCCCCTGGCGACGCAGACG
ACCGTGCCGTATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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