Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|899
Gene name
Locationscaffold_127:5820..6420
Strand+
Gene length (bp)600
Transcript length (bp)492
Coding sequence length (bp)489
Protein length (aa) 163

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00293 NUDIX NUDIX domain 3.4E-17 31 144

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q09790|APS1_SCHPO Diphosphoinositol polyphosphate phosphohydrolase aps1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=aps1 PE=1 SV=1 13 159 5.0E-32
sp|Q99321|DDP1_YEAST Diphosphoinositol polyphosphate phosphohydrolase DDP1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DDP1 PE=1 SV=3 13 159 5.0E-28
sp|Q9ZU95|NUD17_ARATH Nudix hydrolase 17, mitochondrial OS=Arabidopsis thaliana GN=NUDT17 PE=2 SV=1 12 143 2.0E-24
sp|Q8VY81|NUD21_ARATH Nudix hydrolase 21, chloroplastic OS=Arabidopsis thaliana GN=NUDT21 PE=2 SV=1 12 154 4.0E-23
sp|Q9LQU5|NUD18_ARATH Nudix hydrolase 18, mitochondrial OS=Arabidopsis thaliana GN=NUDT18 PE=2 SV=1 12 143 2.0E-22
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Swissprot ID Swissprot Description Start End E-value
sp|Q09790|APS1_SCHPO Diphosphoinositol polyphosphate phosphohydrolase aps1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=aps1 PE=1 SV=1 13 159 5.0E-32
sp|Q99321|DDP1_YEAST Diphosphoinositol polyphosphate phosphohydrolase DDP1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DDP1 PE=1 SV=3 13 159 5.0E-28
sp|Q9ZU95|NUD17_ARATH Nudix hydrolase 17, mitochondrial OS=Arabidopsis thaliana GN=NUDT17 PE=2 SV=1 12 143 2.0E-24
sp|Q8VY81|NUD21_ARATH Nudix hydrolase 21, chloroplastic OS=Arabidopsis thaliana GN=NUDT21 PE=2 SV=1 12 154 4.0E-23
sp|Q9LQU5|NUD18_ARATH Nudix hydrolase 18, mitochondrial OS=Arabidopsis thaliana GN=NUDT18 PE=2 SV=1 12 143 2.0E-22
sp|Q9LE73|NUDT4_ARATH Nudix hydrolase 4 OS=Arabidopsis thaliana GN=NUDT4 PE=1 SV=1 12 143 1.0E-21
sp|Q93ZY7|NUD12_ARATH Nudix hydrolase 12, mitochondrial OS=Arabidopsis thaliana GN=NUDT12 PE=2 SV=1 14 142 7.0E-21
sp|Q52K88|NUD13_ARATH Nudix hydrolase 13, mitochondrial OS=Arabidopsis thaliana GN=NUDT13 PE=1 SV=1 13 142 3.0E-18
sp|Q9LHK1|NUD16_ARATH Nudix hydrolase 16, mitochondrial OS=Arabidopsis thaliana GN=NUDT16 PE=2 SV=1 14 160 3.0E-14
sp|Q8NFP7|NUD10_HUMAN Diphosphoinositol polyphosphate phosphohydrolase 3-alpha OS=Homo sapiens GN=NUDT10 PE=1 SV=1 43 144 1.0E-08
sp|P0C027|NUD10_MOUSE Diphosphoinositol polyphosphate phosphohydrolase 3-alpha OS=Mus musculus GN=Nudt10 PE=1 SV=1 43 144 2.0E-08
sp|P0C028|NUD11_MOUSE Diphosphoinositol polyphosphate phosphohydrolase 3-beta OS=Mus musculus GN=Nudt11 PE=1 SV=1 43 144 2.0E-08
sp|Q566C7|NUDT3_RAT Diphosphoinositol polyphosphate phosphohydrolase 1 OS=Rattus norvegicus GN=Nudt3 PE=1 SV=1 13 156 7.0E-08
sp|Q58CW0|NUD11_BOVIN Diphosphoinositol polyphosphate phosphohydrolase 3-beta OS=Bos taurus GN=NUDT11 PE=2 SV=2 43 144 1.0E-07
sp|Q9JI46|NUDT3_MOUSE Diphosphoinositol polyphosphate phosphohydrolase 1 OS=Mus musculus GN=Nudt3 PE=1 SV=1 13 151 2.0E-07
sp|Q96G61|NUD11_HUMAN Diphosphoinositol polyphosphate phosphohydrolase 3-beta OS=Homo sapiens GN=NUDT11 PE=1 SV=1 43 144 3.0E-07
sp|A2VE79|NUDT3_BOVIN Diphosphoinositol polyphosphate phosphohydrolase 1 OS=Bos taurus GN=NUDT3 PE=2 SV=1 13 151 3.0E-07
sp|O95989|NUDT3_HUMAN Diphosphoinositol polyphosphate phosphohydrolase 1 OS=Homo sapiens GN=NUDT3 PE=1 SV=1 13 144 4.0E-07
sp|Q8R2U6|NUDT4_MOUSE Diphosphoinositol polyphosphate phosphohydrolase 2 OS=Mus musculus GN=Nudt4 PE=1 SV=1 40 144 5.0E-07
sp|Q99MY2|NUDT4_RAT Diphosphoinositol polyphosphate phosphohydrolase 2 OS=Rattus norvegicus GN=Nudt4 PE=2 SV=1 40 156 5.0E-07
sp|Q5RAF0|NUDT4_PONAB Diphosphoinositol polyphosphate phosphohydrolase 2 OS=Pongo abelii GN=NUDT4 PE=2 SV=1 40 144 6.0E-07
sp|Q9NZJ9|NUDT4_HUMAN Diphosphoinositol polyphosphate phosphohydrolase 2 OS=Homo sapiens GN=NUDT4 PE=1 SV=2 40 144 6.0E-07
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GO

(None)

SignalP

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SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 65 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|899
MSGPGSEGSDSLSMQSRTGRNKQRYNSKGERLVAGVVPLSPDQSHVLLIQSTRRKGWVLPKGGWETDESCEEAAT
REAWEEAGITINIDFDLGHIDEKRPPKSSKERARYAFFQATVVSEMDDWPEKHKRERQWFTFSQALEALGARPEL
QEALRRSSIKELQ
Coding >Ophio5|899
ATGTCGGGCCCGGGCTCAGAAGGTTCGGACAGTCTCTCAATGCAGTCGCGCACCGGCAGAAACAAGCAGCGGTAC
AACTCAAAGGGAGAGCGTCTGGTCGCTGGCGTCGTTCCGCTCAGTCCGGATCAGAGCCACGTCCTCCTAATTCAG
TCGACGCGGCGCAAAGGCTGGGTTCTCCCCAAGGGAGGCTGGGAAACGGATGAGTCGTGTGAGGAGGCTGCTACG
CGCGAGGCCTGGGAAGAGGCCGGCATCACCATCAACATCGACTTTGACCTGGGCCACATTGACGAGAAGCGACCG
CCCAAGTCGTCCAAGGAGCGAGCCCGTTATGCCTTCTTTCAGGCCACCGTCGTCAGCGAAATGGACGACTGGCCG
GAGAAGCACAAGCGGGAGCGCCAGTGGTTTACCTTTTCACAGGCCTTGGAGGCTCTAGGCGCTAGACCCGAGCTG
CAGGAAGCCTTGAGGCGGTCCAGCATAAAAGAACTACAA
Transcript >Ophio5|899
ATGTCGGGCCCGGGCTCAGAAGGTTCGGACAGTCTCTCAATGCAGTCGCGCACCGGCAGAAACAAGCAGCGGTAC
AACTCAAAGGGAGAGCGTCTGGTCGCTGGCGTCGTTCCGCTCAGTCCGGATCAGAGCCACGTCCTCCTAATTCAG
TCGACGCGGCGCAAAGGCTGGGTTCTCCCCAAGGGAGGCTGGGAAACGGATGAGTCGTGTGAGGAGGCTGCTACG
CGCGAGGCCTGGGAAGAGGCCGGCATCACCATCAACATCGACTTTGACCTGGGCCACATTGACGAGAAGCGACCG
CCCAAGTCGTCCAAGGAGCGAGCCCGTTATGCCTTCTTTCAGGCCACCGTCGTCAGCGAAATGGACGACTGGCCG
GAGAAGCACAAGCGGGAGCGCCAGTGGTTTACCTTTTCACAGGCCTTGGAGGCTCTAGGCGCTAGACCCGAGCTG
CAGGAAGCCTTGAGGCGGTCCAGCATAAAAGAACTACAATAG
Gene >Ophio5|899
ATGTCGGGCCCGGGCTCAGAAGGTTCGGACAGTCTCTCAATGCAGTCGCGCACCGGCAGAAACAAGCAGCGTGAG
TCATGACGGGCGCGCGGACCTCGAAGCCTGCTTTGTCCTCGAGCGCCGAGCTGCCGGTGGCTCAGTCGACTGACA
ATGGCATTTCTTTTGCTCGCCACTGCAGGGTACAACTCAAAGGGAGAGCGTCTGGTCGCTGGCGTCGTTCCGCTC
AGTCCGGATCAGAGCCACGTCCTCCTAATTCAGTCGACGCGGCGCAAAGGCTGGGTTCTCCCCAAGGGAGGCTGG
GAAACGGATGAGTCGTGTGAGGAGGCTGCTACGCGCGAGGCCTGGGAAGAGGCCGGCATCACCATCAACATCGAC
TTTGACCTGGGCCACATTGACGAGAAGCGACCGCCCAAGTCGTCCAAGGAGCGAGCCCGTTATGCCTTCTTTCAG
GCCACCGTCGTCAGCGAAATGGACGACTGGCCGGAGAAGCACAAGCGGGAGCGCCAGTGGTTTACCTTTTCACAG
GCCTTGGAGGCTCTAGGCGCTAGACCCGAGCTGCAGGAAGCCTTGAGGCGGTCCAGCATAAAAGAACTACAATAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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