Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|896
Gene name
Locationscaffold_127:94..960
Strand+
Gene length (bp)866
Transcript length (bp)768
Coding sequence length (bp)765
Protein length (aa) 255

Your browser does not support drawing a protein figure.

PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 17 0.45

Transmembrane Domains

Domain # Start End Length
1 119 141 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|896
MTSSTTTTTRLLAAAAATPARRVVRVRLPVFIRSFSSSSSSSSSSSSSSSSSTDRPIILEKPAKFNPPSHGSRLR
KSALPRHYSPPLSAAEAAARKQKDYPGLMAPEGSWAHWIWHSRLLHTFITMGALFTMALATFFLNYTQNSPFKDL
VPPMADLWQRPGHFFSAWKDVLVLHDREQTAKAIEHRMVHLDDVAKRIYYMKMHGIEVKNPITMAFGKGEEKQKA
ELAAPPAPDPASEAGAEEKPAPRTKWFGLW
Coding >Ophio5|896
ATGACGTCGTCGACGACGACGACGACGCGCCTCTTGGCTGCTGCTGCTGCTACTCCTGCGCGGCGCGTCGTCCGC
GTTCGTCTTCCGGTCTTCATCCGCTCTTTTTCGTCGTCGTCGTCGTCGTCGTCGTCGTCGTCATCATCATCATCA
TCATCGACCGACCGACCCATCATTCTGGAGAAACCGGCAAAGTTCAACCCCCCGTCGCACGGCTCCCGGCTCCGC
AAGTCGGCTCTTCCCAGACACTATTCGCCGCCGCTGTCGGCTGCCGAGGCGGCGGCCCGCAAGCAGAAGGACTAT
CCTGGCTTGATGGCGCCCGAAGGGAGCTGGGCGCATTGGATATGGCATAGTCGGCTACTGCATACCTTCATCACC
ATGGGCGCGCTCTTCACAATGGCCTTAGCCACCTTCTTCCTCAACTACACGCAAAATTCGCCCTTCAAAGACCTC
GTGCCCCCCATGGCCGACCTCTGGCAACGGCCCGGCCACTTCTTTTCCGCCTGGAAGGACGTTTTGGTCCTGCAT
GATCGGGAACAGACGGCCAAGGCCATTGAGCACCGCATGGTGCACCTCGACGACGTCGCCAAGCGTATTTACTAC
ATGAAGATGCATGGTATCGAGGTCAAAAATCCCATCACCATGGCTTTTGGTAAGGGCGAGGAGAAGCAGAAGGCC
GAGTTGGCTGCCCCTCCGGCTCCTGATCCGGCATCCGAGGCCGGTGCCGAGGAGAAGCCAGCGCCGAGGACGAAA
TGGTTTGGCCTCTGG
Transcript >Ophio5|896
ATGACGTCGTCGACGACGACGACGACGCGCCTCTTGGCTGCTGCTGCTGCTACTCCTGCGCGGCGCGTCGTCCGC
GTTCGTCTTCCGGTCTTCATCCGCTCTTTTTCGTCGTCGTCGTCGTCGTCGTCGTCGTCGTCATCATCATCATCA
TCATCGACCGACCGACCCATCATTCTGGAGAAACCGGCAAAGTTCAACCCCCCGTCGCACGGCTCCCGGCTCCGC
AAGTCGGCTCTTCCCAGACACTATTCGCCGCCGCTGTCGGCTGCCGAGGCGGCGGCCCGCAAGCAGAAGGACTAT
CCTGGCTTGATGGCGCCCGAAGGGAGCTGGGCGCATTGGATATGGCATAGTCGGCTACTGCATACCTTCATCACC
ATGGGCGCGCTCTTCACAATGGCCTTAGCCACCTTCTTCCTCAACTACACGCAAAATTCGCCCTTCAAAGACCTC
GTGCCCCCCATGGCCGACCTCTGGCAACGGCCCGGCCACTTCTTTTCCGCCTGGAAGGACGTTTTGGTCCTGCAT
GATCGGGAACAGACGGCCAAGGCCATTGAGCACCGCATGGTGCACCTCGACGACGTCGCCAAGCGTATTTACTAC
ATGAAGATGCATGGTATCGAGGTCAAAAATCCCATCACCATGGCTTTTGGTAAGGGCGAGGAGAAGCAGAAGGCC
GAGTTGGCTGCCCCTCCGGCTCCTGATCCGGCATCCGAGGCCGGTGCCGAGGAGAAGCCAGCGCCGAGGACGAAA
TGGTTTGGCCTCTGGTAA
Gene >Ophio5|896
ATGACGTCGTCGACGACGACGACGACGCGCCTCTTGGCTGCTGCTGCTGCTACTCCTGCGCGGCGCGTCGTCCGC
GTTCGTCTTCCGGTCTTCATCCGCTCTTTTTCGTCGTCGTCGTCGTCGTCGTCGTCGTCGTCATCATCATCATCA
TCATCGACCGACCGACCCATCATTCTGGAGAAACCGGCAAAGTTCAACCCCCCGTCGCACGGCTCCCGGCTCCGC
AAGTCGGCTCTTCCCAGACACTATTCGCCGCCGCTGTCGGCTGCCGAGGCGGCGGCCCGCAAGCAGAAGGACTAT
CCTGGCTTGATGGCGCCCGAAGGGAGCTGGGCGCATTGGATATGGCATAGTCGGCTACTGCATACCTTCATCACC
ATGGTGCGCCTCTTTTTTTTTTCTTTCTTTCATACCCTTATCTTTTTGACCTGGCGCTTCTTCTCTCTTCTTCTG
ACCTCGACGGCGTCTGCTGCTCACAGGGCGCGCTCTTCACAATGGCCTTAGCCACCTTCTTCCTCAACTACACGC
AAAATTCGCCCTTCAAAGACCTCGTGCCCCCCATGGCCGACCTCTGGCAACGGCCCGGCCACTTCTTTTCCGCCT
GGAAGGACGTTTTGGTCCTGCATGATCGGGAACAGACGGCCAAGGCCATTGAGCACCGCATGGTGCACCTCGACG
ACGTCGCCAAGCGTATTTACTACATGAAGATGCATGGTATCGAGGTCAAAAATCCCATCACCATGGCTTTTGGTA
AGGGCGAGGAGAAGCAGAAGGCCGAGTTGGCTGCCCCTCCGGCTCCTGATCCGGCATCCGAGGCCGGTGCCGAGG
AGAAGCCAGCGCCGAGGACGAAATGGTTTGGCCTCTGGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail