Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|895
Gene name
Locationscaffold_1269:1793..2159
Strand-
Gene length (bp)366
Transcript length (bp)228
Coding sequence length (bp)228
Protein length (aa) 76

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF05493 ATP_synt_H ATP synthase subunit H 5.1E-24 6 66

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q75EU0|VA0E_ASHGO V-type proton ATPase subunit e OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=VMA9 PE=3 SV=1 2 74 1.0E-18
sp|Q3E7B6|VA0E_YEAST V-type proton ATPase subunit e OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=VMA9 PE=1 SV=1 12 74 1.0E-17
sp|Q5K8S8|VA0E_CRYNJ V-type proton ATPase subunit e OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) GN=VMA9 PE=3 SV=2 14 72 6.0E-13
sp|Q69Z14|VA0E_SCHPO V-type proton ATPase subunit e OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=vma9 PE=3 SV=2 15 65 1.0E-11
sp|Q9SZ13|VA0E2_ARATH V-type proton ATPase subunit e2 OS=Arabidopsis thaliana GN=VHA-e2 PE=2 SV=1 7 69 6.0E-07
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Swissprot ID Swissprot Description Start End E-value
sp|Q75EU0|VA0E_ASHGO V-type proton ATPase subunit e OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=VMA9 PE=3 SV=1 2 74 1.0E-18
sp|Q3E7B6|VA0E_YEAST V-type proton ATPase subunit e OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=VMA9 PE=1 SV=1 12 74 1.0E-17
sp|Q5K8S8|VA0E_CRYNJ V-type proton ATPase subunit e OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) GN=VMA9 PE=3 SV=2 14 72 6.0E-13
sp|Q69Z14|VA0E_SCHPO V-type proton ATPase subunit e OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=vma9 PE=3 SV=2 15 65 1.0E-11
sp|Q9SZ13|VA0E2_ARATH V-type proton ATPase subunit e2 OS=Arabidopsis thaliana GN=VHA-e2 PE=2 SV=1 7 69 6.0E-07
sp|Q9FLN5|VA0E1_ARATH V-type proton ATPase subunit e1 OS=Arabidopsis thaliana GN=VHA-e1 PE=2 SV=1 7 67 3.0E-06
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GO

GO Term Description Terminal node
GO:0033179 proton-transporting V-type ATPase, V0 domain Yes
GO:0046961 proton-transporting ATPase activity, rotational mechanism Yes
GO:1902600 proton transmembrane transport Yes
GO:0005215 transporter activity No
GO:0055085 transmembrane transport No
GO:0034220 ion transmembrane transport No
GO:0003674 molecular_function No
GO:0042626 ATPase-coupled transmembrane transporter activity No
GO:0051179 localization No
GO:0006810 transport No
GO:0019829 ATPase-coupled cation transmembrane transporter activity No
GO:0022853 active ion transmembrane transporter activity No
GO:0098662 inorganic cation transmembrane transport No
GO:0051234 establishment of localization No
GO:0032991 protein-containing complex No
GO:0140657 ATP-dependent activity No
GO:0022804 active transmembrane transporter activity No
GO:0098655 cation transmembrane transport No
GO:0008150 biological_process No
GO:0005575 cellular_component No
GO:0022857 transmembrane transporter activity No
GO:0015399 primary active transmembrane transporter activity No
GO:0015078 proton transmembrane transporter activity No
GO:0015318 inorganic molecular entity transmembrane transporter activity No
GO:0006812 cation transport No
GO:0006811 ion transport No
GO:0098660 inorganic ion transmembrane transport No
GO:0008324 cation transmembrane transporter activity No
GO:0098796 membrane protein complex No
GO:0042625 ATPase-coupled ion transmembrane transporter activity No
GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism No
GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain No
GO:0009987 cellular process No
GO:0009678 pyrophosphate hydrolysis-driven proton transmembrane transporter activity No
GO:0015075 ion transmembrane transporter activity No
GO:0022890 inorganic cation transmembrane transporter activity No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 21 0.5

Transmembrane Domains

Domain # Start End Length
1 4 26 22
2 33 55 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|895
MATGLSIFIGAVVIAALCTASWFLAPKGANQVLWRSSLILSIVSCFLMWAITYLAQLNPLIVPKRSDLREQFLEH
*
Coding >Ophio5|895
ATGGCCACAGGACTCTCCATTTTCATTGGCGCAGTCGTAATTGCGGCGCTCTGCACGGCGTCGTGGTTCTTGGCG
CCGAAGGGCGCAAACCAAGTTCTCTGGAGATCCAGTCTTATTCTTTCCATCGTCAGCTGCTTTCTTATGTGGGCC
ATTACATACCTCGCTCAGCTTAACCCCTTGATTGTTCCGAAGCGGAGTGATCTAAGAGAGCAGTTCCTCGAGCAC
TGA
Transcript >Ophio5|895
ATGGCCACAGGACTCTCCATTTTCATTGGCGCAGTCGTAATTGCGGCGCTCTGCACGGCGTCGTGGTTCTTGGCG
CCGAAGGGCGCAAACCAAGTTCTCTGGAGATCCAGTCTTATTCTTTCCATCGTCAGCTGCTTTCTTATGTGGGCC
ATTACATACCTCGCTCAGCTTAACCCCTTGATTGTTCCGAAGCGGAGTGATCTAAGAGAGCAGTTCCTCGAGCAC
TGA
Gene >Ophio5|895
ATGGCCACAGGGTATCATTCCCTACCTTTTTGTTGATGTTCGTCGTGTAGATGGTCGATACTGATTATACTTCTG
CTGGACAAGACTCTCCATTTTCATTGGCGCAGTCGTAATTGCGGCGCTCTGCACGGCGTCGTGGTTCTTGGCGCC
GAAGGGCGCAAACCAAGTGTTGGTTTCCGCAGCCTAGTACCGCAGTCCTGTGCTATTAGCTAATGAAGCTGATGA
TTGAATAGTCTCTGGAGATCCAGTCTTATTCTTTCCATCGTCAGCTGCTTTCTTATGTGGGCCATTACATACCTC
GCTCAGCTTAACCCCTTGATTGTTCCGAAGCGGAGTGATCTAAGAGAGCAGTTCCTCGAGCACTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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