Fungal Genomics

at Utrecht University

General Properties

Protein ID	Ophio5\|870
Gene name
Location	scaffold_1259:917..2195
Strand	-
Gene length (bp)	1278
Transcript length (bp)	969
Coding sequence length (bp)	966
Protein length (aa)	322

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF00293	NUDIX	NUDIX domain	3.0E-09	170	264
PF15916	DUF4743	Domain of unknown function (DUF4743)	8.1E-08	86	149

Swissprot hits

Swissprot ID	Swissprot Description	Start	End	E-value
sp\|P41888\|TNR3_SCHPO	Thiamine pyrophosphokinase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=tnr3 PE=3 SV=1	55	305	9.0E-41
sp\|P47173\|YJ9J_YEAST	Uncharacterized protein YJR142W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YJR142W PE=1 SV=1	55	305	2.0E-40
sp\|Q8VXZ0\|NUD20_ARATH	Nudix hydrolase 20, chloroplastic OS=Arabidopsis thaliana GN=NUDT20 PE=2 SV=1	55	301	2.0E-28
sp\|P0C026\|NUD24_ARATH	Nudix hydrolase 24, chloroplastic OS=Arabidopsis thaliana GN=NUDT24 PE=2 SV=1	96	293	6.0E-26

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 11	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ophio5\|870 MRNNKNNNTPSIHAQGGARRFPYGQDQGSIATVPELARNGLFILLWEDDEGRYPIGYMLDRVVEELLRVPPSVRG PVDLNGNNRSILLFQLPTEGERSRLVAGLAHYWRVRETFGLLRRWRDEAWPVYSRKGELLFTVERAAMGLLGTMR YGAHLTAYINDASASHGIKLWVARRAANKATFPGMLDNTVAGGLVPGEDPIDCIVREAVEEASLSVDLVRRSVSC WVYDLHLPANETPKPNDGEVDQFFLCDVDQIKADMADGKFKPNCAVVLLDFFIRHGILTKADEDYLDIINSRMHR ELPFPGPHKGDWHPVEKPSSHF
Coding	>Ophio5\|870 ATGCGTAATAATAAGAACAACAACACACCTTCTATCCATGCACAGGGTGGCGCGCGAAGATTTCCGTATGGCCAA GACCAAGGTAGCATTGCCACTGTACCAGAACTGGCTCGAAACGGCCTATTTATTCTTCTATGGGAAGATGATGAG GGGCGATACCCAATCGGCTACATGCTCGACCGTGTAGTGGAGGAGCTCTTGCGAGTACCACCCAGCGTACGAGGC CCCGTGGATCTGAACGGGAACAACCGTTCAATCCTCCTATTTCAACTTCCGACGGAAGGCGAGAGGAGCCGACTC GTTGCGGGCCTGGCACATTATTGGCGCGTTCGCGAGACTTTTGGTCTCCTTCGACGATGGAGAGACGAGGCTTGG CCAGTCTACAGCCGCAAAGGCGAGCTCCTCTTCACTGTCGAACGGGCAGCTATGGGTTTACTGGGTACAATGCGG TACGGCGCGCATCTCACTGCGTATATTAACGACGCCTCTGCTTCTCATGGTATCAAGTTGTGGGTTGCGAGGCGC GCCGCAAACAAAGCTACTTTTCCAGGCATGCTCGACAACACCGTTGCTGGCGGTCTTGTGCCTGGCGAAGACCCA ATTGATTGTATCGTCCGCGAGGCTGTCGAGGAGGCGAGCCTGTCTGTCGACTTGGTGCGGCGTTCTGTCAGCTGC TGGGTTTACGATCTACATCTACCCGCTAACGAGACTCCCAAGCCCAACGACGGCGAGGTCGACCAGTTCTTCCTC TGCGATGTGGATCAGATTAAAGCCGACATGGCCGATGGGAAGTTCAAACCGAACTGCGCCGTGGTTCTTCTTGAT TTTTTCATCCGTCATGGTATCCTGACTAAGGCCGACGAAGATTATCTCGACATCATCAATAGCAGAATGCATCGC GAGTTACCATTCCCTGGTCCGCATAAGGGGGACTGGCATCCGGTCGAGAAACCGTCGTCACACTTT
Transcript	>Ophio5\|870 ATGCGTAATAATAAGAACAACAACACACCTTCTATCCATGCACAGGGTGGCGCGCGAAGATTTCCGTATGGCCAA GACCAAGGTAGCATTGCCACTGTACCAGAACTGGCTCGAAACGGCCTATTTATTCTTCTATGGGAAGATGATGAG GGGCGATACCCAATCGGCTACATGCTCGACCGTGTAGTGGAGGAGCTCTTGCGAGTACCACCCAGCGTACGAGGC CCCGTGGATCTGAACGGGAACAACCGTTCAATCCTCCTATTTCAACTTCCGACGGAAGGCGAGAGGAGCCGACTC GTTGCGGGCCTGGCACATTATTGGCGCGTTCGCGAGACTTTTGGTCTCCTTCGACGATGGAGAGACGAGGCTTGG CCAGTCTACAGCCGCAAAGGCGAGCTCCTCTTCACTGTCGAACGGGCAGCTATGGGTTTACTGGGTACAATGCGG TACGGCGCGCATCTCACTGCGTATATTAACGACGCCTCTGCTTCTCATGGTATCAAGTTGTGGGTTGCGAGGCGC GCCGCAAACAAAGCTACTTTTCCAGGCATGCTCGACAACACCGTTGCTGGCGGTCTTGTGCCTGGCGAAGACCCA ATTGATTGTATCGTCCGCGAGGCTGTCGAGGAGGCGAGCCTGTCTGTCGACTTGGTGCGGCGTTCTGTCAGCTGC TGGGTTTACGATCTACATCTACCCGCTAACGAGACTCCCAAGCCCAACGACGGCGAGGTCGACCAGTTCTTCCTC TGCGATGTGGATCAGATTAAAGCCGACATGGCCGATGGGAAGTTCAAACCGAACTGCGCCGTGGTTCTTCTTGAT TTTTTCATCCGTCATGGTATCCTGACTAAGGCCGACGAAGATTATCTCGACATCATCAATAGCAGAATGCATCGC GAGTTACCATTCCCTGGTCCGCATAAGGGGGACTGGCATCCGGTCGAGAAACCGTCGTCACACTTTTGA
Gene	>Ophio5\|870 ATGCGTAATAATAAGAACAACAACACACCTTCTATCCATGCACAGGGTGGCGCGCGAAGGTAGATTAGGCTTGCG AATGTTTAATTCTTGCCGTCATACAATGTGCTACCTTTACCACTGTGAGAGCATAGGAGAAAATGATGTCCAACT TAAACATAATCGATGCTACGGATAAGTTTGTTAGCACTTTCAGTATTGTCGTCCTCACGCCTTCTTCAATGACCC TTTCATTTATATTTGTTATCTTAGTCAGATCTCCACGATTCACTGCTCTAACGTCCGGAGCCTAGATTTCCGTAT GGCCAAGACCAAGGTAGCATTGCCACTGTACCAGAACTGGCTCGAAACGGCCTATTTATTCTTCTATGGGAAGAT GATGAGGGGCGATACCCAATCGGCTACATGCTCGACCGTGTAGTGGAGGAGCTCTTGCGAGTACCACCCAGCGTA CGAGGCCCCGTGGATCTGAACGGGAACAACCGTTCAATCCTCCTATTTCAACTTCCGACGGAAGGCGAGAGGAGC CGACTCGTTGCGGGCCTGGCACATTATTGGCGCGTTCGCGAGACTTTTGGTCTCCTTCGACGATGGAGAGACGAG GCTTGGCCAGTCTACAGCCGCAAAGGCGAGCTCCTCTTCACTGTCGAACGGGCAGCTATGGGTTTACTGGGTACA ATGCGGTACGGCGCGCATCTCACTGCGTATATTAACGACGCCTCTGCTTCTCATGGTATCAAGTTGTGGGTTGCG AGGCGCGCCGCAAACAAAGCTACTTTTCCAGGCATGCTCGACAACACCGTTGCTGGCGGTCTTGTGCCTGGCGAA GACCCAATTGATTGTATCGTCCGCGAGGCTGTCGAGGAGGCGAGCCTGTCTGTCGACTTGGTGCGGCGTTCTGTC AGCTGCGTAGGCACAGTCACATACATATACATTACTGACGAAGCTCACTTTGGCGAGGATGGCCTCATCTATCCC GAGTGTCAGTGGGTTTACGATCTACATCTACCCGCTAACGAGACTCCCAAGCCCAACGACGGCGAGGTCGACCAG TTCTTCCTCTGCGATGTGGATCAGATTAAAGCCGACATGGCCGATGGGAAGTTCAAACCGAACTGCGCCGTGGTT CTTCTTGATTTTTTCATCCGTCATGGTATCCTGACTAAGGCCGACGAAGATTATCTCGACATCATCAATAGCAGA ATGCATCGCGAGTTACCATTCCCTGGTCCGCATAAGGGGGACTGGCATCCGGTCGAGAAACCGTCGTCACACTTT TGA

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