Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|8612
Gene name
Locationscaffold_990:315..1252
Strand-
Gene length (bp)937
Transcript length (bp)786
Coding sequence length (bp)783
Protein length (aa) 261

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 24 0.45

Transmembrane Domains

Domain # Start End Length
1 81 103 22
2 113 135 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|8612
MPRLDLLSLRLSLRASIPSPSQGLVSCISVTRLRFSLPTRRIFRRPASTTTISSSRRGDQTFQLPAQILIYHAGA
GRTTFLAMVRLSSLVVAVFFIFLIAPAYVRADKDIASTAAIVAGGIVPLTLVTLTASPFVTHMYINLPDAARASR
HALERFVANLPASTPLTLTTMNFVAVPRYTHLRAVDLRPAVGTRLSRFGLVNYVRRRDSPRPSFRNVNGFFVQPR
HPVKPRAPVDPRRDFVEGWIWEAVRQRIERGNAVKS
Coding >Ophio5|8612
ATGCCGCGGCTGGACCTGCTCTCGCTCCGGCTCTCACTCCGAGCCTCGATACCATCACCGTCTCAGGGCCTCGTA
AGCTGCATCTCAGTCACGCGTCTTCGCTTTTCGCTGCCAACGCGCCGAATCTTTCGTCGGCCTGCTTCGACGACG
ACCATCAGCAGCAGCCGCCGTGGCGACCAGACGTTTCAATTACCAGCTCAGATCCTCATCTATCATGCCGGCGCC
GGTCGAACCACCTTCCTAGCCATGGTGCGGCTCTCGAGCCTCGTCGTCGCCGTCTTCTTCATCTTCCTCATAGCG
CCGGCCTACGTGCGCGCAGACAAAGACATAGCCTCGACAGCAGCAATCGTCGCCGGTGGCATCGTCCCACTCACC
CTCGTCACCCTCACCGCCTCCCCTTTCGTCACACACATGTACATCAATCTTCCGGACGCAGCCCGAGCCTCTCGC
CATGCCCTCGAGCGCTTCGTCGCCAATTTACCTGCCAGCACGCCGCTGACGCTGACGACGATGAACTTTGTTGCC
GTCCCGCGCTACACGCATCTTCGCGCTGTGGATCTGCGACCGGCTGTCGGTACGAGGCTGAGCCGCTTCGGCCTC
GTCAATTATGTTCGTCGTCGTGATTCCCCGCGCCCTTCATTCCGCAACGTCAATGGCTTCTTCGTTCAGCCGCGG
CATCCCGTCAAGCCTCGTGCTCCTGTTGACCCGCGGAGGGACTTTGTCGAGGGTTGGATTTGGGAGGCTGTTCGG
CAGAGAATTGAGCGGGGGAATGCCGTCAAGTCT
Transcript >Ophio5|8612
ATGCCGCGGCTGGACCTGCTCTCGCTCCGGCTCTCACTCCGAGCCTCGATACCATCACCGTCTCAGGGCCTCGTA
AGCTGCATCTCAGTCACGCGTCTTCGCTTTTCGCTGCCAACGCGCCGAATCTTTCGTCGGCCTGCTTCGACGACG
ACCATCAGCAGCAGCCGCCGTGGCGACCAGACGTTTCAATTACCAGCTCAGATCCTCATCTATCATGCCGGCGCC
GGTCGAACCACCTTCCTAGCCATGGTGCGGCTCTCGAGCCTCGTCGTCGCCGTCTTCTTCATCTTCCTCATAGCG
CCGGCCTACGTGCGCGCAGACAAAGACATAGCCTCGACAGCAGCAATCGTCGCCGGTGGCATCGTCCCACTCACC
CTCGTCACCCTCACCGCCTCCCCTTTCGTCACACACATGTACATCAATCTTCCGGACGCAGCCCGAGCCTCTCGC
CATGCCCTCGAGCGCTTCGTCGCCAATTTACCTGCCAGCACGCCGCTGACGCTGACGACGATGAACTTTGTTGCC
GTCCCGCGCTACACGCATCTTCGCGCTGTGGATCTGCGACCGGCTGTCGGTACGAGGCTGAGCCGCTTCGGCCTC
GTCAATTATGTTCGTCGTCGTGATTCCCCGCGCCCTTCATTCCGCAACGTCAATGGCTTCTTCGTTCAGCCGCGG
CATCCCGTCAAGCCTCGTGCTCCTGTTGACCCGCGGAGGGACTTTGTCGAGGGTTGGATTTGGGAGGCTGTTCGG
CAGAGAATTGAGCGGGGGAATGCCGTCAAGTCTTGA
Gene >Ophio5|8612
ATGCCGCGGCTGGACCTGCTCTCGCTCCGGCTCTCACTCCGAGCCTCGATACCATCACCGTCTCAGGGCCTCGTA
AGCTGCATCTCAGTCACGCGTCTTCGCTTTTCGCTGCCAACGCGCCGAATCTTTCGTCGGCCTGCTTCGACGACG
ACCATCAGCAGCAGCCGCCGTGGCGACCAGACGTTTCGTACGACACTCCGACAGTAGTAGTGCAAAGGTGTCAAA
AGCTAAGATAGGCAAGAACAGAATTACCAGCTCAGATCCTCATCTATCATGCCGGCGCCGGTCGAACCACCTTCC
TAGCCATGGTGCGGCTCTCGAGCCTCGTCGTCGCCGTCTTCTTCATCTTCCTCATAGCGCCGGCCTACGTGCGCG
CAGACAAAGACATAGCCTCGACAGCAGCAAGTCCGTTTTTCACCCCATCTCATCTCTCACCAGACTCGATGGAGA
CGAATGAAAGGACACAAAAACTAAGCATAGACAATGAATGTTGCCAGTCGTCGCCGGTGGCATCGTCCCACTCAC
CCTCGTCACCCTCACCGCCTCCCCTTTCGTCACACACATGTACATCAATCTTCCGGACGCAGCCCGAGCCTCTCG
CCATGCCCTCGAGCGCTTCGTCGCCAATTTACCTGCCAGCACGCCGCTGACGCTGACGACGATGAACTTTGTTGC
CGTCCCGCGCTACACGCATCTTCGCGCTGTGGATCTGCGACCGGCTGTCGGTACGAGGCTGAGCCGCTTCGGCCT
CGTCAATTATGTTCGTCGTCGTGATTCCCCGCGCCCTTCATTCCGCAACGTCAATGGCTTCTTCGTTCAGCCGCG
GCATCCCGTCAAGCCTCGTGCTCCTGTTGACCCGCGGAGGGACTTTGTCGAGGGTTGGATTTGGGAGGCTGTTCG
GCAGAGAATTGAGCGGGGGAATGCCGTCAAGTCTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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