© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ophio5|8606 |
| Gene name | |
| Location | scaffold_99:27165..28851 |
| Strand | + |
| Gene length (bp) | 1686 |
| Transcript length (bp) | 1368 |
| Coding sequence length (bp) | 1365 |
| Protein length (aa) | 455 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 22 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 113 | 135 | 22 |
| 2 | 148 | 165 | 17 |
| 3 | 196 | 213 | 17 |
| 4 | 225 | 247 | 22 |
| 5 | 272 | 294 | 22 |
| 6 | 306 | 328 | 22 |
| 7 | 348 | 370 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophio5|8606 MPSICDLQFLTRTCLPSGCRTEVQKRAALPPPLPREYASSANRIYVHVLAEMLRIGRVGLVRHSPDSLPGEPHDS SRVPIMMAAPIDPNTTPALMPPAGVVPDPLNSHTGQPLLVGMATAGVSLTTVCTVIRLYTKHVILKQLNVEDFLL VFATLGLAAFSAILLSNGDAGQGHHQWNMSIANVRRVALFANVSETLYAPVMFAAKAAVLLSLKRIFTGAQRNYV HWAFVLLIVLNGLFYLSIMFAFVFACVPRGKIENSSLPGTCISTNGLLLATSASNILSDVSILLLPLIVVCSLQT PLKRKVTVGAVFMTGFFGCISSVLRLYYSILLFLTDDMTWAIYPVGVWAVAEIATVILACCFPVFPRFLYHVRHG GKARRSSNPFVKGYRVNSSAEAYPLQYNRGVYTETTLTAAPWDSSSVQRVMGKDDSVELNERNMSDEGRSVTPVA GGRRT |
| Coding | >Ophio5|8606 ATGCCGTCTATCTGCGACTTGCAGTTCTTGACTCGGACCTGTTTACCGTCCGGTTGCCGAACCGAGGTCCAGAAA AGGGCAGCATTGCCCCCACCGCTACCCCGCGAGTATGCTTCATCCGCAAACCGGATTTACGTACACGTACTCGCG GAGATGCTACGGATAGGGCGCGTCGGCCTTGTACGCCACTCTCCAGACTCTCTCCCCGGAGAGCCTCATGACAGC TCCCGAGTCCCAATCATGATGGCGGCTCCCATTGATCCCAACACGACGCCCGCGTTGATGCCGCCCGCCGGCGTG GTGCCCGACCCCCTCAACTCGCATACCGGGCAGCCCTTGCTGGTGGGAATGGCGACGGCAGGCGTGTCTTTGACG ACGGTTTGCACCGTCATTCGTCTTTACACGAAGCATGTGATCTTGAAGCAGCTGAACGTAGAGGACTTTTTGCTG GTTTTCGCGACGCTGGGACTCGCCGCCTTCAGTGCCATCTTATTGTCAAACGGCGACGCCGGCCAGGGACATCAT CAATGGAACATGTCTATCGCCAACGTCCGGAGAGTGGCTTTGTTTGCCAACGTCAGCGAGACCCTTTACGCACCG GTCATGTTCGCCGCCAAGGCGGCTGTGCTGCTAAGCTTGAAGCGTATCTTCACCGGGGCACAGAGAAACTATGTG CATTGGGCATTCGTTCTGTTGATTGTGCTCAATGGTCTGTTCTACCTCTCCATCATGTTCGCCTTCGTCTTCGCC TGCGTGCCGCGAGGCAAGATTGAGAATTCTTCGCTGCCTGGGACCTGCATCTCCACCAACGGGCTGCTCTTGGCA ACGTCTGCATCCAACATTCTGTCGGACGTGTCTATTCTCCTGCTTCCCCTCATTGTGGTCTGTTCGTTGCAAACG CCGTTGAAGAGAAAGGTGACGGTGGGGGCGGTTTTCATGACGGGTTTCTTCGGGTGCATTTCCAGTGTCTTGCGA CTCTACTACAGCATCCTGCTGTTCCTCACCGACGATATGACCTGGGCAATCTACCCTGTTGGGGTGTGGGCTGTG GCCGAGATTGCCACCGTTATCCTTGCCTGTTGCTTTCCCGTGTTCCCGCGATTTTTATACCATGTCCGGCATGGC GGCAAGGCGCGGAGGTCGAGCAACCCGTTTGTCAAAGGCTATCGAGTAAATTCGTCCGCGGAAGCATACCCACTA CAGTATAATCGTGGCGTCTACACCGAGACGACCTTGACGGCCGCGCCATGGGATTCTAGTTCGGTTCAACGTGTG ATGGGCAAGGACGATTCCGTGGAGTTGAACGAGAGGAATATGAGCGATGAAGGTCGTTCGGTGACGCCGGTTGCT GGCGGGCGCCGGACC |
| Transcript | >Ophio5|8606 ATGCCGTCTATCTGCGACTTGCAGTTCTTGACTCGGACCTGTTTACCGTCCGGTTGCCGAACCGAGGTCCAGAAA AGGGCAGCATTGCCCCCACCGCTACCCCGCGAGTATGCTTCATCCGCAAACCGGATTTACGTACACGTACTCGCG GAGATGCTACGGATAGGGCGCGTCGGCCTTGTACGCCACTCTCCAGACTCTCTCCCCGGAGAGCCTCATGACAGC TCCCGAGTCCCAATCATGATGGCGGCTCCCATTGATCCCAACACGACGCCCGCGTTGATGCCGCCCGCCGGCGTG GTGCCCGACCCCCTCAACTCGCATACCGGGCAGCCCTTGCTGGTGGGAATGGCGACGGCAGGCGTGTCTTTGACG ACGGTTTGCACCGTCATTCGTCTTTACACGAAGCATGTGATCTTGAAGCAGCTGAACGTAGAGGACTTTTTGCTG GTTTTCGCGACGCTGGGACTCGCCGCCTTCAGTGCCATCTTATTGTCAAACGGCGACGCCGGCCAGGGACATCAT CAATGGAACATGTCTATCGCCAACGTCCGGAGAGTGGCTTTGTTTGCCAACGTCAGCGAGACCCTTTACGCACCG GTCATGTTCGCCGCCAAGGCGGCTGTGCTGCTAAGCTTGAAGCGTATCTTCACCGGGGCACAGAGAAACTATGTG CATTGGGCATTCGTTCTGTTGATTGTGCTCAATGGTCTGTTCTACCTCTCCATCATGTTCGCCTTCGTCTTCGCC TGCGTGCCGCGAGGCAAGATTGAGAATTCTTCGCTGCCTGGGACCTGCATCTCCACCAACGGGCTGCTCTTGGCA ACGTCTGCATCCAACATTCTGTCGGACGTGTCTATTCTCCTGCTTCCCCTCATTGTGGTCTGTTCGTTGCAAACG CCGTTGAAGAGAAAGGTGACGGTGGGGGCGGTTTTCATGACGGGTTTCTTCGGGTGCATTTCCAGTGTCTTGCGA CTCTACTACAGCATCCTGCTGTTCCTCACCGACGATATGACCTGGGCAATCTACCCTGTTGGGGTGTGGGCTGTG GCCGAGATTGCCACCGTTATCCTTGCCTGTTGCTTTCCCGTGTTCCCGCGATTTTTATACCATGTCCGGCATGGC GGCAAGGCGCGGAGGTCGAGCAACCCGTTTGTCAAAGGCTATCGAGTAAATTCGTCCGCGGAAGCATACCCACTA CAGTATAATCGTGGCGTCTACACCGAGACGACCTTGACGGCCGCGCCATGGGATTCTAGTTCGGTTCAACGTGTG ATGGGCAAGGACGATTCCGTGGAGTTGAACGAGAGGAATATGAGCGATGAAGGTCGTTCGGTGACGCCGGTTGCT GGCGGGCGCCGGACCTGA |
| Gene | >Ophio5|8606 ATGCCGTCTATCTGCGACTTGCAGTTCTTGACTCGGACCTGTTTACCGTCCGGTTGCCGAACCGAGGTCCAGAAA AGGGCAGCATTGCCCCCACCGCTACCCCGCGAGTATGCTTCATCCGCAAACCGGATTTACGTACACGTACTCGCG GAGATGCTACGGATAGGGGTAAGAGAAAACATGCCCAATGACTTAAACCGAACGGATACAGCGCGTCGGCCTTGT ACGCCACTCTCCAGACTCTCTCCCCGGAGAGCCTCATGACAGCTCCCGAGTCCCAATCATGATGGCGGCTCCCAT TGATCCCAACACGACGCCCGCGTTGATGCCGCCCGCCGGCGTGGTGCCCGACCCCCTCAACTCGCATACCGGGCA GCCCTTGCTGGTGGGAATGGCGACGGCAGGCGTGTCTTTGACGACGGTTTGCACCGTCATTCGTCTTTACACGAA GCATGTGATCTTGAAGCAGCTGAACGTAGAGGACTGTAAGTGCAGATGGGACTAGACGATACGGAGGCTCTCTCT AATCTTCGATTAGTTTTGCTGGTTTTCGCGACGGTACGTTTGTCTTGAGCAGTCTGCGTCGCCGGTGAAGCTGAG ATGATGTGGCCACGGTTCCAGCTGGGACTCGCCGCCTTCAGTGCCATCTTATTGTCAAACGGCGACGCCGGCCAG GGACATCATCAATGGAACATGTCTATCGCCAACGTCCGGAGAGTGGCTTTGGTACGAAACAGACTCAGTTCTCGG CCAGACGAGGACAGACTGACTGAGGCAGAATATATAGTTTGCCAACGTCAGCGAGACCCTTTACGCACCGGTCAT GTTCGCCGCCAAGGCGGCTGTGCTGCTAAGCTTGAAGCGTATCTTCACCGGGGCACAGAGAAACTATGTGCATTG GGCATTCGTTCTGTTGATTGTGCTCAATGGTCTGTTCTACCTCTCCATCATGTTCGCCTTCGTCTTCGCCTGCGT GCCGCGAGGCAAGATTGAGAATTCTTCGCTGCCTGGGACCTGCATCTCCACCAACGGGCTGCTCTTGGCAACGTC TGCATCCAACATTCTGTCGGACGTGTCTATTCTCCTGCTTCCCCTCATTGTGGTCTGTTCGTTGCAAACGCCGTT GAAGAGAAAGGTGACGGTGGGGGCGGTTTTCATGACGGGTTTCTTGTAAGAATGACTCCCGTCTTCGTCGAAACG AACGGCTGACTTGTGGCCAGCGGGTGCATTTCCAGTGTCTTGCGACTCTACTACAGCATCCTGCTGTTCCTCACC GACGATATGACCTGGGCAATCTACCCTGTTGGGGTGTGGGCGTACGTTTGATACCCTCGCCAGCCTCTCCCATAC TGACAGATTTCCAGTGTGGCCGAGATTGCCACCGTTATCCTTGCCTGTTGCTTTCCCGTGTTCCCGCGATTTTTA TACCATGTCCGGCATGGCGGCAAGGCGCGGAGGTCGAGCAACCCGTTTGTCAAAGGCTATCGAGTAAATTCGTCC GCGGAAGCATACCCACTACAGTATAATCGTGGCGTCTACACCGAGACGACCTTGACGGCCGCGCCATGGGATTCT AGTTCGGTTCAACGTGTGATGGGCAAGGACGATTCCGTGGAGTTGAACGAGAGGAATATGAGCGATGAAGGTCGT TCGGTGACGCCGGTTGCTGGCGGGCGCCGGACCTGA |