Protein ID | Ophio5|8593 |
Gene name | |
Location | scaffold_989:533..2466 |
Strand | - |
Gene length (bp) | 1933 |
Transcript length (bp) | 1818 |
Coding sequence length (bp) | 1815 |
Protein length (aa) | 605 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF11374 | DUF3176 | Protein of unknown function (DUF3176) | 2.3E-22 | 90 | 203 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 12 | 0.45 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 71 | 93 | 22 |
2 | 103 | 125 | 22 |
3 | 516 | 538 | 22 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophio5|8593 MRLGATHLRPRNYLDSRTAATSNSPHDAASNSGVRGLFSCHDGAADDEVVENAELGINHISRRCRSPLNWWVVEY WCAALCIAGITTLSLVLWRCDGKLSPDFGVGIKLDMIVIAIMTLVRVTLGSIVESCICQGAWIWVSKSHQTRTKN KARLEDFKLFDEASRGFLGSAALLWRLKGMHISCIGAVIILVTHGLETFSQQMFVYVQAPTVSVSQMSRPAPAPF RSDYWDNVSERGIQSGYSLTLSTKSAVYSGILAAQVRDLEPQCDTANCTWPVIPTLAICGHCDDAPVQVHCSSQS NFCTFGISSDTNVTLPNRAEMDTFRVSPVNASLDDALEQGRTYVSVFEILTITKRQAATKMSGARCALWLCLKAY NISVANGRSQQVLVATWNASRFEAATSAHTDEHVFTDIPKTLNTRPLSRYSVSDRSLKALRNFLESLTSGTFEHA SNVINFSSDWIEAMWQATADLEVWIETLSQSLTNEFREHGTIRDPYETDYEGSASRMANYVHVKWLWMVYPVLIL VTSLYYLLLTIVAGARDGVLAWKCDSLPMLFSRIHPSILALGSDKMNEPRGLDDLGKSRVALTKDENGFWTFEPS DWKNE |
Coding | >Ophio5|8593 ATGAGGCTAGGTGCAACGCATCTGCGCCCGCGGAATTACCTCGACAGCCGAACCGCTGCTACCAGCAACAGTCCG CATGACGCCGCCTCCAACTCTGGCGTACGAGGATTGTTTTCATGCCACGATGGTGCAGCCGACGACGAAGTTGTC GAGAATGCTGAGCTTGGGATAAACCATATCTCTCGGCGATGCCGCTCTCCCCTCAATTGGTGGGTCGTCGAGTAC TGGTGCGCCGCTTTGTGCATCGCTGGCATCACCACTCTCTCCCTCGTGTTGTGGCGTTGCGATGGCAAATTATCA CCAGATTTCGGCGTCGGCATCAAGCTTGACATGATCGTCATCGCCATCATGACCCTCGTCCGGGTCACCCTCGGA AGTATCGTCGAGTCTTGTATCTGCCAAGGAGCCTGGATTTGGGTTTCCAAGTCGCACCAGACTCGTACCAAAAAC AAAGCTAGGCTCGAGGACTTCAAGCTGTTTGACGAGGCATCACGAGGTTTCCTTGGCAGTGCAGCCTTACTATGG CGTCTCAAGGGAATGCATATATCTTGCATCGGGGCTGTGATTATACTAGTGACGCATGGCTTGGAGACGTTTTCC CAGCAGATGTTTGTCTACGTTCAAGCACCGACAGTTTCTGTTAGCCAAATGTCTCGGCCGGCCCCTGCCCCTTTC CGAAGCGACTATTGGGACAACGTTTCCGAGAGAGGGATTCAGAGTGGCTACTCGCTTACGCTGTCGACCAAATCA GCCGTTTATAGTGGCATCCTAGCTGCCCAGGTTCGCGATCTCGAACCACAATGCGATACGGCCAACTGCACATGG CCTGTTATCCCAACCCTTGCGATCTGCGGCCACTGTGATGACGCCCCCGTTCAAGTTCATTGCTCGAGCCAGTCG AACTTCTGTACGTTCGGCATCTCGAGCGATACAAACGTCACCTTGCCCAACCGTGCAGAGATGGACACATTCCGC GTGAGCCCTGTGAACGCGAGCCTTGATGACGCCTTGGAGCAGGGAAGGACCTATGTATCCGTTTTTGAGATCCTG ACCATAACCAAACGTCAGGCCGCAACTAAAATGAGCGGGGCGAGGTGTGCACTGTGGCTATGCCTCAAAGCATAC AACATCTCCGTGGCCAACGGCCGATCGCAGCAAGTTCTTGTGGCTACGTGGAATGCGAGCCGATTCGAGGCAGCA ACAAGTGCTCATACCGACGAGCACGTATTTACGGATATTCCGAAAACGTTGAACACGCGCCCATTATCGAGGTAC AGCGTATCCGACCGCTCCCTGAAGGCCCTGCGCAACTTTCTGGAGTCTTTGACCAGCGGGACGTTCGAACATGCC TCGAACGTCATAAATTTCTCGTCTGACTGGATCGAGGCCATGTGGCAAGCAACCGCCGATTTAGAGGTATGGATC GAGACACTTAGCCAAAGCTTAACAAATGAATTCCGCGAGCACGGGACAATCCGCGATCCCTATGAGACAGATTAT GAAGGGAGCGCCTCGAGAATGGCCAACTATGTCCACGTAAAGTGGCTTTGGATGGTATATCCAGTCCTGATCCTT GTCACCAGCCTGTACTATCTCCTTCTCACCATCGTCGCCGGAGCTCGCGACGGGGTTTTAGCCTGGAAGTGTGAT TCCCTGCCTATGTTGTTCAGCCGAATTCACCCGAGTATCCTGGCTTTGGGTTCAGACAAAATGAACGAGCCCAGG GGTTTGGACGATCTTGGCAAATCAAGAGTGGCTTTAACTAAAGATGAGAACGGGTTTTGGACCTTCGAACCAAGC GATTGGAAGAACGAG |
Transcript | >Ophio5|8593 ATGAGGCTAGGTGCAACGCATCTGCGCCCGCGGAATTACCTCGACAGCCGAACCGCTGCTACCAGCAACAGTCCG CATGACGCCGCCTCCAACTCTGGCGTACGAGGATTGTTTTCATGCCACGATGGTGCAGCCGACGACGAAGTTGTC GAGAATGCTGAGCTTGGGATAAACCATATCTCTCGGCGATGCCGCTCTCCCCTCAATTGGTGGGTCGTCGAGTAC TGGTGCGCCGCTTTGTGCATCGCTGGCATCACCACTCTCTCCCTCGTGTTGTGGCGTTGCGATGGCAAATTATCA CCAGATTTCGGCGTCGGCATCAAGCTTGACATGATCGTCATCGCCATCATGACCCTCGTCCGGGTCACCCTCGGA AGTATCGTCGAGTCTTGTATCTGCCAAGGAGCCTGGATTTGGGTTTCCAAGTCGCACCAGACTCGTACCAAAAAC AAAGCTAGGCTCGAGGACTTCAAGCTGTTTGACGAGGCATCACGAGGTTTCCTTGGCAGTGCAGCCTTACTATGG CGTCTCAAGGGAATGCATATATCTTGCATCGGGGCTGTGATTATACTAGTGACGCATGGCTTGGAGACGTTTTCC CAGCAGATGTTTGTCTACGTTCAAGCACCGACAGTTTCTGTTAGCCAAATGTCTCGGCCGGCCCCTGCCCCTTTC CGAAGCGACTATTGGGACAACGTTTCCGAGAGAGGGATTCAGAGTGGCTACTCGCTTACGCTGTCGACCAAATCA GCCGTTTATAGTGGCATCCTAGCTGCCCAGGTTCGCGATCTCGAACCACAATGCGATACGGCCAACTGCACATGG CCTGTTATCCCAACCCTTGCGATCTGCGGCCACTGTGATGACGCCCCCGTTCAAGTTCATTGCTCGAGCCAGTCG AACTTCTGTACGTTCGGCATCTCGAGCGATACAAACGTCACCTTGCCCAACCGTGCAGAGATGGACACATTCCGC GTGAGCCCTGTGAACGCGAGCCTTGATGACGCCTTGGAGCAGGGAAGGACCTATGTATCCGTTTTTGAGATCCTG ACCATAACCAAACGTCAGGCCGCAACTAAAATGAGCGGGGCGAGGTGTGCACTGTGGCTATGCCTCAAAGCATAC AACATCTCCGTGGCCAACGGCCGATCGCAGCAAGTTCTTGTGGCTACGTGGAATGCGAGCCGATTCGAGGCAGCA ACAAGTGCTCATACCGACGAGCACGTATTTACGGATATTCCGAAAACGTTGAACACGCGCCCATTATCGAGGTAC AGCGTATCCGACCGCTCCCTGAAGGCCCTGCGCAACTTTCTGGAGTCTTTGACCAGCGGGACGTTCGAACATGCC TCGAACGTCATAAATTTCTCGTCTGACTGGATCGAGGCCATGTGGCAAGCAACCGCCGATTTAGAGGTATGGATC GAGACACTTAGCCAAAGCTTAACAAATGAATTCCGCGAGCACGGGACAATCCGCGATCCCTATGAGACAGATTAT GAAGGGAGCGCCTCGAGAATGGCCAACTATGTCCACGTAAAGTGGCTTTGGATGGTATATCCAGTCCTGATCCTT GTCACCAGCCTGTACTATCTCCTTCTCACCATCGTCGCCGGAGCTCGCGACGGGGTTTTAGCCTGGAAGTGTGAT TCCCTGCCTATGTTGTTCAGCCGAATTCACCCGAGTATCCTGGCTTTGGGTTCAGACAAAATGAACGAGCCCAGG GGTTTGGACGATCTTGGCAAATCAAGAGTGGCTTTAACTAAAGATGAGAACGGGTTTTGGACCTTCGAACCAAGC GATTGGAAGAACGAGTAA |
Gene | >Ophio5|8593 ATGAGGCTAGGTGCAACGCATCTGCGCCCGCGGAATTACCTCGACAGCCGAACCGCTGCTACCAGCAACAGTCCG CATGACGCCGCCTCCAACTCTGGCGTACGAGGATTGTTTTCATGCCACGATGGTGCAGCCGACGACGAAGTTGTC GAGAATGCTGAGCTTGGGATAAACCATATCTCTCGGCGATGCCGCTCTCCCCTCAATTGGTGGGTCGTCGAGTAC TGGTGCGCCGCTTTGTGCATCGCTGGCATCACCACTCTCTCCCTCGTGTTGTGGCGTTGCGATGGCAAATTATCA CCAGATTTCGGCGTCGGCATCAAGCTTGACATGATCGTCATCGCCATCATGACCCTCGTCCGGGTCACCCTCGGA AGTATCGTCGAGTCTTGTATCTGCCAAGGAGCCTGGATTTGGGTTTCCAAGTCGCACCAGACTCGTACCAAAAAC AAAGCTAGGCTCGAGGACTTCAAGCTGTTTGACGAGGCATCACGAGGTTTCCTTGGCAGTGCAGCCTTACTATGG CGTCTCAAGGGAATGTCGGTCCTCCCCAATCCGTTACCAGTTCTGGAAATCGAGTCTAACCGCCGCTTCCGTAGG CATATATCTTGCATCGGGGCTGTGATTATACTAGTGACGCATGGCTTGGAGACGTTTTCCCAGCAGATGTTTGTC TACGTTCAAGCACCGACAGTTTCTGTTAGCCAAATGTCTCGGCCGGCCCCTGCCCCTTTCCGAAGCGACTATTGG GACAACGTTTCCGAGAGAGGGATTCAGAGTGGTATGTTTTTGGGTAAATACAAGCTACATGTGCCCTGCCACTGA AAACGACGCAGGCTACTCGCTTACGCTGTCGACCAAATCAGCCGTTTATAGTGGCATCCTAGCTGCCCAGGTTCG CGATCTCGAACCACAATGCGATACGGCCAACTGCACATGGCCTGTTATCCCAACCCTTGCGATCTGCGGCCACTG TGATGACGCCCCCGTTCAAGTTCATTGCTCGAGCCAGTCGAACTTCTGTACGTTCGGCATCTCGAGCGATACAAA CGTCACCTTGCCCAACCGTGCAGAGATGGACACATTCCGCGTGAGCCCTGTGAACGCGAGCCTTGATGACGCCTT GGAGCAGGGAAGGACCTATGTATCCGTTTTTGAGATCCTGACCATAACCAAACGTCAGGCCGCAACTAAAATGAG CGGGGCGAGGTGTGCACTGTGGCTATGCCTCAAAGCATACAACATCTCCGTGGCCAACGGCCGATCGCAGCAAGT TCTTGTGGCTACGTGGAATGCGAGCCGATTCGAGGCAGCAACAAGTGCTCATACCGACGAGCACGTATTTACGGA TATTCCGAAAACGTTGAACACGCGCCCATTATCGAGGTACAGCGTATCCGACCGCTCCCTGAAGGCCCTGCGCAA CTTTCTGGAGTCTTTGACCAGCGGGACGTTCGAACATGCCTCGAACGTCATAAATTTCTCGTCTGACTGGATCGA GGCCATGTGGCAAGCAACCGCCGATTTAGAGGTATGGATCGAGACACTTAGCCAAAGCTTAACAAATGAATTCCG CGAGCACGGGACAATCCGCGATCCCTATGAGACAGATTATGAAGGGAGCGCCTCGAGAATGGCCAACTATGTCCA CGTAAAGTGGCTTTGGATGGTATATCCAGTCCTGATCCTTGTCACCAGCCTGTACTATCTCCTTCTCACCATCGT CGCCGGAGCTCGCGACGGGGTTTTAGCCTGGAAGTGTGATTCCCTGCCTATGTTGTTCAGCCGAATTCACCCGAG TATCCTGGCTTTGGGTTCAGACAAAATGAACGAGCCCAGGGGTTTGGACGATCTTGGCAAATCAAGAGTGGCTTT AACTAAAGATGAGAACGGGTTTTGGACCTTCGAACCAAGCGATTGGAAGAACGAGTAA |