Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|8590
Gene name
Locationscaffold_987:1663..3034
Strand+
Gene length (bp)1371
Transcript length (bp)1314
Coding sequence length (bp)1311
Protein length (aa) 437

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00172 Zn_clus Fungal Zn(2)-Cys(6) binuclear cluster domain 4.4E-08 182 222

Swissprot hits

(None)

GO

GO Term Description Terminal node
GO:0006355 regulation of transcription, DNA-templated Yes
GO:0008270 zinc ion binding Yes
GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific Yes
GO:0008150 biological_process No
GO:0051252 regulation of RNA metabolic process No
GO:0060255 regulation of macromolecule metabolic process No
GO:0019222 regulation of metabolic process No
GO:0050794 regulation of cellular process No
GO:0140110 transcription regulator activity No
GO:0031323 regulation of cellular metabolic process No
GO:0065007 biological regulation No
GO:0046872 metal ion binding No
GO:0010468 regulation of gene expression No
GO:0043167 ion binding No
GO:0043169 cation binding No
GO:0003674 molecular_function No
GO:0019219 regulation of nucleobase-containing compound metabolic process No
GO:0051171 regulation of nitrogen compound metabolic process No
GO:0005488 binding No
GO:0080090 regulation of primary metabolic process No
GO:0009889 regulation of biosynthetic process No
GO:0050789 regulation of biological process No
GO:0003700 DNA-binding transcription factor activity No
GO:1903506 regulation of nucleic acid-templated transcription No
GO:2001141 regulation of RNA biosynthetic process No
GO:0046914 transition metal ion binding No
GO:0010556 regulation of macromolecule biosynthetic process No
GO:0031326 regulation of cellular biosynthetic process No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 66 0.45

Transmembrane Domains

(None)

Transcription Factor Class

Transcription Factor Class
(based on PFAM domains)
Fungal Specific TF

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|8590
MADDQHQHQQQSRFPPVSPENHHHQSRAPVAPRAPMAATVLPSIHETRAAAGYASQPPPPSARPYPLDGRYSSPN
AVNGYPPPPASQQSSSSTFLPPLQASPTDARSPAYPPPDQRTPYLDDRRPPGPYGAEGFYFRGPPPGPVPPNSYP
RPPQGAYQEYAQQAAGAPSLAQAAPRQRTSIACRYCRKRKIRCSGYQNTPGGKCQNCARMNQECIFQPVSSSSST
AFIPVSAVPGGVPPGTQLFGAYGQPLAPNVMAGAHPYPPQQHPGGPSPGMYPPPPQQQQQQQQQQQPPPPPTQSP
TGSYSSYGDEASQVVGRRRRRTPEEREEGYRLPPPRGGEDEPRRRSPAELSGDSSPGGVPHAPSYQSSRQSPRTA
PSAQMANAPNGSSGGSTPARQQSGQPSSVMSLSNLVEKNDIDRTMIDRLNHARDAKSANGSR
Coding >Ophio5|8590
ATGGCCGACGACCAGCATCAGCATCAGCAGCAGTCTCGTTTCCCGCCCGTGTCTCCCGAGAACCACCATCATCAG
TCACGCGCCCCGGTCGCGCCTCGAGCACCCATGGCTGCCACCGTCTTGCCGTCGATTCACGAGACCCGCGCGGCT
GCGGGATATGCTTCGCAGCCGCCTCCCCCGTCGGCCCGTCCCTATCCCCTGGATGGCCGTTACTCGTCGCCAAAT
GCCGTCAACGGCTATCCGCCTCCCCCGGCCAGCCAGCAGTCGTCGTCATCTACTTTTCTGCCGCCGCTGCAAGCC
AGTCCGACGGATGCCCGCTCGCCCGCCTACCCACCACCTGACCAGCGAACTCCGTACTTGGATGACCGCCGGCCG
CCGGGCCCCTACGGAGCCGAGGGCTTCTACTTCCGCGGCCCGCCCCCCGGTCCCGTTCCGCCAAATAGCTATCCG
CGCCCGCCTCAGGGCGCCTATCAGGAGTATGCGCAGCAGGCCGCCGGCGCACCCTCCCTGGCCCAGGCCGCCCCT
CGTCAGCGCACTTCTATCGCCTGCAGATACTGTCGGAAGCGCAAGATTCGTTGCAGCGGGTACCAAAACACGCCC
GGCGGCAAGTGCCAGAACTGCGCACGGATGAACCAGGAATGCATATTCCAGCCCGTGTCGTCGTCGAGCTCAACG
GCCTTCATCCCCGTGTCGGCTGTGCCAGGAGGTGTTCCGCCGGGCACCCAGCTGTTCGGCGCCTACGGCCAGCCC
CTGGCGCCCAATGTCATGGCTGGCGCTCATCCTTACCCGCCGCAGCAGCACCCTGGAGGACCTTCGCCGGGAATG
TATCCGCCGCCGCCGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAACAGCCGCCGCCGCCTCCGACGCAGTCCCCT
ACCGGCTCCTACTCGTCGTACGGGGACGAGGCCTCGCAGGTGGTGGGCAGGCGGCGACGTCGGACGCCCGAGGAA
CGAGAGGAAGGTTACCGGCTACCGCCGCCACGCGGAGGAGAGGATGAGCCGCGACGTCGATCTCCGGCCGAGCTG
TCCGGCGACAGCAGTCCCGGCGGCGTGCCGCACGCGCCCTCCTACCAGTCGTCCCGGCAGAGCCCGCGCACGGCA
CCTTCGGCTCAGATGGCGAACGCGCCCAACGGCTCGAGCGGCGGGTCGACGCCGGCGCGGCAGCAGTCGGGCCAG
CCGTCATCGGTCATGAGCCTCAGCAACCTGGTGGAGAAGAACGATATCGATCGGACCATGATTGATCGGCTGAAC
CACGCCCGCGATGCCAAGAGCGCCAACGGCTCGCGT
Transcript >Ophio5|8590
ATGGCCGACGACCAGCATCAGCATCAGCAGCAGTCTCGTTTCCCGCCCGTGTCTCCCGAGAACCACCATCATCAG
TCACGCGCCCCGGTCGCGCCTCGAGCACCCATGGCTGCCACCGTCTTGCCGTCGATTCACGAGACCCGCGCGGCT
GCGGGATATGCTTCGCAGCCGCCTCCCCCGTCGGCCCGTCCCTATCCCCTGGATGGCCGTTACTCGTCGCCAAAT
GCCGTCAACGGCTATCCGCCTCCCCCGGCCAGCCAGCAGTCGTCGTCATCTACTTTTCTGCCGCCGCTGCAAGCC
AGTCCGACGGATGCCCGCTCGCCCGCCTACCCACCACCTGACCAGCGAACTCCGTACTTGGATGACCGCCGGCCG
CCGGGCCCCTACGGAGCCGAGGGCTTCTACTTCCGCGGCCCGCCCCCCGGTCCCGTTCCGCCAAATAGCTATCCG
CGCCCGCCTCAGGGCGCCTATCAGGAGTATGCGCAGCAGGCCGCCGGCGCACCCTCCCTGGCCCAGGCCGCCCCT
CGTCAGCGCACTTCTATCGCCTGCAGATACTGTCGGAAGCGCAAGATTCGTTGCAGCGGGTACCAAAACACGCCC
GGCGGCAAGTGCCAGAACTGCGCACGGATGAACCAGGAATGCATATTCCAGCCCGTGTCGTCGTCGAGCTCAACG
GCCTTCATCCCCGTGTCGGCTGTGCCAGGAGGTGTTCCGCCGGGCACCCAGCTGTTCGGCGCCTACGGCCAGCCC
CTGGCGCCCAATGTCATGGCTGGCGCTCATCCTTACCCGCCGCAGCAGCACCCTGGAGGACCTTCGCCGGGAATG
TATCCGCCGCCGCCGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAACAGCCGCCGCCGCCTCCGACGCAGTCCCCT
ACCGGCTCCTACTCGTCGTACGGGGACGAGGCCTCGCAGGTGGTGGGCAGGCGGCGACGTCGGACGCCCGAGGAA
CGAGAGGAAGGTTACCGGCTACCGCCGCCACGCGGAGGAGAGGATGAGCCGCGACGTCGATCTCCGGCCGAGCTG
TCCGGCGACAGCAGTCCCGGCGGCGTGCCGCACGCGCCCTCCTACCAGTCGTCCCGGCAGAGCCCGCGCACGGCA
CCTTCGGCTCAGATGGCGAACGCGCCCAACGGCTCGAGCGGCGGGTCGACGCCGGCGCGGCAGCAGTCGGGCCAG
CCGTCATCGGTCATGAGCCTCAGCAACCTGGTGGAGAAGAACGATATCGATCGGACCATGATTGATCGGCTGAAC
CACGCCCGCGATGCCAAGAGCGCCAACGGCTCGCGTTAA
Gene >Ophio5|8590
ATGGCCGACGACCAGCATCAGCATCAGCAGCAGTCTCGTTTCCCGCCCGTGTCTCCCGAGAACCACCATCATCAG
TCACGCGCCCCGGTCGCGCCTCGAGCACCCATGGCTGCCACCGTCTTGCCGTCGATTCACGAGACCCGCGCGGCT
GCGGGATATGCTTCGCAGCCGCCTCCCCCGTCGGCCCGTCCCTATCCCCTGGATGGCCGTTACTCGTCGCCAAAT
GCCGTCAACGGCTATCCGCCTCCCCCGGCCAGCCAGCAGTCGTCGTCATCTACTTTTCTGCCGCCGCTGCAAGCC
AGTCCGACGGATGCCCGCTCGCCCGCCTACCCACCACCTGACCAGCGAACTCCGTACTTGGATGACCGCCGGCCG
CCGGGCCCCTACGGAGCCGAGGGCTTCTACTTCCGCGGCCCGCCCCCCGGTCCCGTTCCGCCAAATAGCTATCCG
CGCCCGCCTCAGGGCGCCTATCAGGAGTATGCGCAGCAGGCCGCCGGCGCACCCTCCCTGGCCCAGGCCGCCCCT
CGTCAGCGCACTTCTATCGCCTGCAGATACTGTCGGAAGCGCAAGGTCCGATATCGTCTTTATCGTCCCTCTCCT
CGGCAGCGCTGACGTGGTTGCTTTTAGATTCGTTGCAGCGGGTACCAAAACACGCCCGGCGGCAAGTGCCAGAAC
TGCGCACGGATGAACCAGGAATGCATATTCCAGCCCGTGTCGTCGTCGAGCTCAACGGCCTTCATCCCCGTGTCG
GCTGTGCCAGGAGGTGTTCCGCCGGGCACCCAGCTGTTCGGCGCCTACGGCCAGCCCCTGGCGCCCAATGTCATG
GCTGGCGCTCATCCTTACCCGCCGCAGCAGCACCCTGGAGGACCTTCGCCGGGAATGTATCCGCCGCCGCCGCAG
CAGCAGCAGCAGCAGCAGCAGCAGCAACAGCCGCCGCCGCCTCCGACGCAGTCCCCTACCGGCTCCTACTCGTCG
TACGGGGACGAGGCCTCGCAGGTGGTGGGCAGGCGGCGACGTCGGACGCCCGAGGAACGAGAGGAAGGTTACCGG
CTACCGCCGCCACGCGGAGGAGAGGATGAGCCGCGACGTCGATCTCCGGCCGAGCTGTCCGGCGACAGCAGTCCC
GGCGGCGTGCCGCACGCGCCCTCCTACCAGTCGTCCCGGCAGAGCCCGCGCACGGCACCTTCGGCTCAGATGGCG
AACGCGCCCAACGGCTCGAGCGGCGGGTCGACGCCGGCGCGGCAGCAGTCGGGCCAGCCGTCATCGGTCATGAGC
CTCAGCAACCTGGTGGAGAAGAACGATATCGATCGGACCATGATTGATCGGCTGAACCACGCCCGCGATGCCAAG
AGCGCCAACGGCTCGCGTTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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