Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|8584
Gene name
Locationscaffold_980:364..3132
Strand+
Gene length (bp)2768
Transcript length (bp)2181
Coding sequence length (bp)2178
Protein length (aa) 726

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF04082 Fungal_trans Fungal specific transcription factor domain 4.3E-12 231 440
PF00172 Zn_clus Fungal Zn(2)-Cys(6) binuclear cluster domain 6.3E-09 17 52

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|O59741|YN25_SCHPO Uncharacterized transcriptional regulatory protein C530.05 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC530.05 PE=3 SV=2 8 497 1.0E-12
sp|O14130|YF54_SCHPO Uncharacterized transcriptional regulatory protein C3C7.04 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC3C7.04 PE=3 SV=1 16 518 8.0E-11
sp|Q9UTN0|YII3_SCHPO Uncharacterized transcriptional regulatory protein C139.03 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC139.03 PE=3 SV=1 13 354 3.0E-08
sp|P11638|QA1F_NEUCR Quinic acid utilization activator OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=qa-1f PE=3 SV=2 9 68 2.0E-06
sp|P39113|CAT8_YEAST Regulatory protein CAT8 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CAT8 PE=1 SV=2 13 109 6.0E-06

GO

GO Term Description Terminal node
GO:0006351 transcription, DNA-templated Yes
GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific Yes
GO:0006355 regulation of transcription, DNA-templated Yes
GO:0008270 zinc ion binding Yes
GO:0003677 DNA binding Yes
GO:0003676 nucleic acid binding No
GO:0019219 regulation of nucleobase-containing compound metabolic process No
GO:0003674 molecular_function No
GO:0044237 cellular metabolic process No
GO:0043169 cation binding No
GO:0043167 ion binding No
GO:0008152 metabolic process No
GO:0006139 nucleobase-containing compound metabolic process No
GO:1901576 organic substance biosynthetic process No
GO:0010468 regulation of gene expression No
GO:0046872 metal ion binding No
GO:0046483 heterocycle metabolic process No
GO:0051171 regulation of nitrogen compound metabolic process No
GO:0065007 biological regulation No
GO:0090304 nucleic acid metabolic process No
GO:0044238 primary metabolic process No
GO:0031323 regulation of cellular metabolic process No
GO:0140110 transcription regulator activity No
GO:0050794 regulation of cellular process No
GO:0019222 regulation of metabolic process No
GO:0018130 heterocycle biosynthetic process No
GO:0060255 regulation of macromolecule metabolic process No
GO:0006725 cellular aromatic compound metabolic process No
GO:0008150 biological_process No
GO:1901360 organic cyclic compound metabolic process No
GO:0003700 DNA-binding transcription factor activity No
GO:0009058 biosynthetic process No
GO:0044249 cellular biosynthetic process No
GO:0034641 cellular nitrogen compound metabolic process No
GO:0051252 regulation of RNA metabolic process No
GO:0031326 regulation of cellular biosynthetic process No
GO:0006807 nitrogen compound metabolic process No
GO:1901362 organic cyclic compound biosynthetic process No
GO:0010556 regulation of macromolecule biosynthetic process No
GO:0046914 transition metal ion binding No
GO:2001141 regulation of RNA biosynthetic process No
GO:1903506 regulation of nucleic acid-templated transcription No
GO:0097159 organic cyclic compound binding No
GO:0034654 nucleobase-containing compound biosynthetic process No
GO:0019438 aromatic compound biosynthetic process No
GO:0050789 regulation of biological process No
GO:0016070 RNA metabolic process No
GO:0097659 nucleic acid-templated transcription No
GO:0009889 regulation of biosynthetic process No
GO:0009059 macromolecule biosynthetic process No
GO:0080090 regulation of primary metabolic process No
GO:1901363 heterocyclic compound binding No
GO:0044271 cellular nitrogen compound biosynthetic process No
GO:0032774 RNA biosynthetic process No
GO:0009987 cellular process No
GO:0043170 macromolecule metabolic process No
GO:0005488 binding No
GO:0071704 organic substance metabolic process No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 11 0.45

Transmembrane Domains

(None)

Transcription Factor Class

Transcription Factor Class
(based on PFAM domains)
Fungal Specific TF

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|8584
MDRTDRPLTKRLRASLACNGCRQTKSKCDGARPMCERCTRNGASCVYSQSGQDKRMQRQDERRANLALMSRVKEL
EARLAAVTSSSPQLSSIIEEPNCQRGSISLSDGSESTADAIATGLFDHPPANDIGYFGSSSNHAFFWSLSTSIEN
ISRRDARGQDLTRHMPPVAPLPAPVPPPPDRPGDDSFPELKVAVAWVMRFFYTVGAVLLYVDESDVLAELDAIDA
RGRGWQSSSPSTQALLSIIFAHALNTLEERSPEPFYRRALGLLDNKTAHVPTISALQALLLLSRFQQNTQRSMES
WAPHYLAVRVSYQLGIHAPASYKQLGIHDKELRSRLWFAVVNQDRILTAGLARPCLIPLQHVRTEIAEFLDAARP
SKSTEMNCSRESVTYFRRLITLHEILGAAVESIYSSNINSSSRLPLGDLLAKTMDLVWKLDQWREKTDPAGAVLT
GADFSQWPTAAFETNRFNVLLTIFHYRAQMLMHGSLLMRVLERATGSSDQDASSAAVHDASLSLLSNYLRDLQEW
LRFIDGILNHERSFLPSNAVWWTSNYMMLSTCIHAFAFWLLTDNIKSSSATLGMHSADAEVFLRSSLDTLKRVGG
SSIMSRKAHRCLERYLHIIKSIRPARRGSVASDAGPASAPASAHGSSFGGDQTEAAALTPLTPVALVTSQWNSSG
DGGGGGGLGPGPDVYGGPMDVFGGMGQVDFMYAGFLGIERAISDYDAAGFI
Coding >Ophio5|8584
ATGGATCGCACGGACCGGCCGCTGACGAAGCGGCTCCGGGCCTCGTTGGCCTGCAACGGGTGCCGCCAAACCAAG
TCCAAGTGCGATGGAGCCCGGCCGATGTGTGAGCGCTGCACCCGCAATGGCGCCAGCTGTGTGTATTCGCAGAGC
GGACAGGACAAGCGAATGCAGCGTCAGGACGAGAGAAGAGCCAACCTGGCGCTGATGAGTAGGGTCAAGGAGCTT
GAGGCTCGCCTCGCTGCCGTCACCTCTTCGTCGCCCCAGCTGTCGAGTATAATCGAAGAGCCCAACTGCCAACGG
GGTTCCATCTCCCTTTCGGACGGCTCCGAGTCGACAGCCGATGCCATCGCGACGGGGTTGTTTGACCATCCTCCC
GCCAACGATATCGGCTACTTTGGCTCAAGCTCCAATCACGCCTTCTTCTGGTCCCTCTCCACCAGCATCGAAAAC
ATCAGCCGTCGCGATGCCCGTGGCCAGGACCTCACTCGTCACATGCCGCCCGTCGCGCCGCTGCCCGCGCCTGTC
CCTCCGCCTCCGGACCGCCCTGGCGACGACTCGTTTCCTGAGCTCAAGGTGGCTGTCGCCTGGGTCATGCGCTTC
TTCTATACCGTCGGCGCCGTCTTGCTGTACGTCGACGAGTCGGATGTGCTGGCCGAACTTGACGCTATCGACGCA
CGCGGCCGAGGATGGCAGTCTTCGAGCCCGTCGACGCAGGCTCTGCTCAGCATCATATTCGCCCATGCTTTGAAT
ACGCTCGAGGAGCGTTCACCTGAGCCGTTTTATCGCCGTGCCTTGGGCTTGTTGGATAACAAAACGGCTCATGTG
CCGACCATCTCTGCCCTGCAGGCATTACTTCTCCTTTCCAGATTCCAACAAAACACCCAGAGGTCCATGGAGAGT
TGGGCGCCGCATTACCTCGCCGTCAGGGTGTCGTATCAGCTCGGCATCCACGCGCCGGCCTCGTACAAGCAGCTC
GGCATCCACGATAAAGAGTTGCGCTCGCGGCTTTGGTTTGCCGTCGTGAATCAGGACAGGATCTTGACGGCCGGC
TTGGCCCGCCCCTGTCTCATCCCTTTACAGCACGTCCGGACCGAAATCGCCGAGTTTCTCGACGCCGCGCGGCCT
AGCAAGAGTACGGAGATGAACTGCTCCAGGGAGAGTGTCACCTACTTCCGCCGCCTCATAACTCTACACGAGATT
CTAGGCGCCGCCGTCGAATCCATCTACAGCTCCAACATCAACTCATCCAGCCGCCTTCCGCTGGGAGACCTCCTA
GCCAAGACCATGGATCTCGTCTGGAAGCTCGACCAGTGGCGGGAGAAGACGGATCCCGCCGGAGCCGTCCTGACC
GGCGCCGACTTTAGCCAGTGGCCCACGGCCGCGTTTGAGACGAACCGGTTCAACGTCCTCCTCACCATCTTCCAC
TATCGGGCCCAGATGCTGATGCACGGGTCCCTACTGATGAGGGTCCTCGAGCGGGCCACGGGGTCCTCGGATCAG
GACGCCTCCTCGGCCGCTGTTCATGACGCGTCGTTGTCTCTGCTGAGCAACTACCTGCGGGACCTTCAGGAGTGG
CTGCGGTTCATCGACGGCATCCTGAATCATGAGCGGTCGTTTCTTCCTAGCAACGCCGTCTGGTGGACGAGCAAT
TACATGATGCTCTCCACCTGCATACACGCCTTTGCCTTTTGGCTGCTGACGGACAACATCAAGTCCAGCTCGGCA
ACGCTAGGCATGCACAGCGCCGACGCCGAGGTATTCCTACGGTCCAGCCTCGACACGCTGAAACGCGTCGGGGGC
TCGAGCATCATGAGTCGCAAGGCCCATCGCTGCCTGGAGCGCTACCTGCACATCATCAAGAGCATCCGCCCCGCA
AGGCGCGGCTCGGTCGCTTCGGACGCCGGGCCGGCATCCGCGCCGGCCTCCGCGCACGGCAGCAGTTTCGGAGGC
GACCAGACCGAGGCGGCGGCCCTGACGCCCCTGACGCCCGTCGCGCTGGTGACGTCTCAGTGGAACTCGTCGGGA
GACGGAGGCGGCGGCGGCGGCCTCGGGCCCGGACCCGACGTGTATGGGGGACCGATGGATGTGTTTGGGGGAATG
GGTCAGGTCGATTTCATGTATGCGGGCTTTTTGGGTATCGAACGGGCCATCAGCGACTATGATGCCGCCGGCTTT
ATC
Transcript >Ophio5|8584
ATGGATCGCACGGACCGGCCGCTGACGAAGCGGCTCCGGGCCTCGTTGGCCTGCAACGGGTGCCGCCAAACCAAG
TCCAAGTGCGATGGAGCCCGGCCGATGTGTGAGCGCTGCACCCGCAATGGCGCCAGCTGTGTGTATTCGCAGAGC
GGACAGGACAAGCGAATGCAGCGTCAGGACGAGAGAAGAGCCAACCTGGCGCTGATGAGTAGGGTCAAGGAGCTT
GAGGCTCGCCTCGCTGCCGTCACCTCTTCGTCGCCCCAGCTGTCGAGTATAATCGAAGAGCCCAACTGCCAACGG
GGTTCCATCTCCCTTTCGGACGGCTCCGAGTCGACAGCCGATGCCATCGCGACGGGGTTGTTTGACCATCCTCCC
GCCAACGATATCGGCTACTTTGGCTCAAGCTCCAATCACGCCTTCTTCTGGTCCCTCTCCACCAGCATCGAAAAC
ATCAGCCGTCGCGATGCCCGTGGCCAGGACCTCACTCGTCACATGCCGCCCGTCGCGCCGCTGCCCGCGCCTGTC
CCTCCGCCTCCGGACCGCCCTGGCGACGACTCGTTTCCTGAGCTCAAGGTGGCTGTCGCCTGGGTCATGCGCTTC
TTCTATACCGTCGGCGCCGTCTTGCTGTACGTCGACGAGTCGGATGTGCTGGCCGAACTTGACGCTATCGACGCA
CGCGGCCGAGGATGGCAGTCTTCGAGCCCGTCGACGCAGGCTCTGCTCAGCATCATATTCGCCCATGCTTTGAAT
ACGCTCGAGGAGCGTTCACCTGAGCCGTTTTATCGCCGTGCCTTGGGCTTGTTGGATAACAAAACGGCTCATGTG
CCGACCATCTCTGCCCTGCAGGCATTACTTCTCCTTTCCAGATTCCAACAAAACACCCAGAGGTCCATGGAGAGT
TGGGCGCCGCATTACCTCGCCGTCAGGGTGTCGTATCAGCTCGGCATCCACGCGCCGGCCTCGTACAAGCAGCTC
GGCATCCACGATAAAGAGTTGCGCTCGCGGCTTTGGTTTGCCGTCGTGAATCAGGACAGGATCTTGACGGCCGGC
TTGGCCCGCCCCTGTCTCATCCCTTTACAGCACGTCCGGACCGAAATCGCCGAGTTTCTCGACGCCGCGCGGCCT
AGCAAGAGTACGGAGATGAACTGCTCCAGGGAGAGTGTCACCTACTTCCGCCGCCTCATAACTCTACACGAGATT
CTAGGCGCCGCCGTCGAATCCATCTACAGCTCCAACATCAACTCATCCAGCCGCCTTCCGCTGGGAGACCTCCTA
GCCAAGACCATGGATCTCGTCTGGAAGCTCGACCAGTGGCGGGAGAAGACGGATCCCGCCGGAGCCGTCCTGACC
GGCGCCGACTTTAGCCAGTGGCCCACGGCCGCGTTTGAGACGAACCGGTTCAACGTCCTCCTCACCATCTTCCAC
TATCGGGCCCAGATGCTGATGCACGGGTCCCTACTGATGAGGGTCCTCGAGCGGGCCACGGGGTCCTCGGATCAG
GACGCCTCCTCGGCCGCTGTTCATGACGCGTCGTTGTCTCTGCTGAGCAACTACCTGCGGGACCTTCAGGAGTGG
CTGCGGTTCATCGACGGCATCCTGAATCATGAGCGGTCGTTTCTTCCTAGCAACGCCGTCTGGTGGACGAGCAAT
TACATGATGCTCTCCACCTGCATACACGCCTTTGCCTTTTGGCTGCTGACGGACAACATCAAGTCCAGCTCGGCA
ACGCTAGGCATGCACAGCGCCGACGCCGAGGTATTCCTACGGTCCAGCCTCGACACGCTGAAACGCGTCGGGGGC
TCGAGCATCATGAGTCGCAAGGCCCATCGCTGCCTGGAGCGCTACCTGCACATCATCAAGAGCATCCGCCCCGCA
AGGCGCGGCTCGGTCGCTTCGGACGCCGGGCCGGCATCCGCGCCGGCCTCCGCGCACGGCAGCAGTTTCGGAGGC
GACCAGACCGAGGCGGCGGCCCTGACGCCCCTGACGCCCGTCGCGCTGGTGACGTCTCAGTGGAACTCGTCGGGA
GACGGAGGCGGCGGCGGCGGCCTCGGGCCCGGACCCGACGTGTATGGGGGACCGATGGATGTGTTTGGGGGAATG
GGTCAGGTCGATTTCATGTATGCGGGCTTTTTGGGTATCGAACGGGCCATCAGCGACTATGATGCCGCCGGCTTT
ATCTAG
Gene >Ophio5|8584
ATGGATCGCACGGACCGGCCGCTGACGAAGCGGCTCCGGGCCTCGTTGGCCTGCAACGGGTGCCGCCAAACCAAG
TCCAAGGTGAAGGGAGCCCCATATTGATACATCCTTTGATGATGATGGGCTGTCGAGCTGACAGCTTCCTTTTCC
TCTTCCATTTCAGTGCGATGGAGCCCGGCCGATGTGTGAGCGCTGCACCCGCAATGGCGCCAGCTGTGTGTATTC
GCAGAGCGGACAGGACAAGCGAATGCAGCGTCAGGACGAGAGAAGGTTGCTGAATTTTCCCTTTCCTGCTTGAAT
TTGCTGTCAATAGGCCGCTGACGCTTCTTCTCCTCTTCTAGAGCCAACCTGGCGCTGATGAGTAGGGTCAAGGAG
CTTGAGGCTCGCCTCGCTGCCGTCACCTCTTCGTCGCCCCAGCTGTCGAGTATAATCGAAGAGCCCAACTGCCAA
CGGGGTTCCATCTCCCTTTCGGACGGCTCCGAGTCGACAGCCGATGCCATCGCGACGGGGTTGTTTGACCATCCT
CCCGCCAACGATATCGGCTACTTTGGTGAGCCTTGTCGTCCTTTTTTTTTTTTGGTCCTCGTCCTCGTCATCGTC
CTCTACGAGGTTGTCCAAGACCGTCAGCTGAGGCCTTCTTCTCGTTTTTTTCCCCCCCAGGCTCAAGCTCCAATC
ACGCCTTCTTCTGGTCCCTCTCCACCAGCATCGAAAACATCAGCCGTCGCGATGCCCGTGGCCAGGACCTCACTC
GTCACATGCCGCCCGTCGCGCCGCTGCCCGCGCCTGTCCCTCCGCCTCCGGACCGCCCTGGCGACGACTCGTTTC
CTGAGCTCAAGGTGGCTGTCGCCTGGGTCATGCGCTTCTTCTATACCGTCGGCGCCGTCTTGCTGTACGTCGACG
AGTCGGATGTGCTGGCCGAACTTGACGCTATCGACGCACGCGGCCGAGGATGGCAGTCTTCGAGCCCGTCGACGC
AGGCTCTGCTCAGCATCATATTCGCCCATGCTTTGAATACGCTCGAGGAGCGTTCACCTGAGCCGTTTTATCGCC
GTGCCTTGGGCTTGTTGGATAACAAAACGGCTCATGTGCCGACCATCTCTGCCCGTACGACTTCCCCTGATGCGC
CACCTTGTTTTTTTGTCCTCGGCCCCCCCCGGCTTATGATGAGCAGTGCAGGCATTACTTCTCCTTTCCAGATTC
CAACAAAACACCCAGAGGTCCATGGAGAGTTGGGCGCCGCATTACCTCGCCGTCAGGGTGTCGTATCAGCTCGGC
ATCCACGCGCCGGCCTCGTACAAGCAGCTCGGCATCCACGATAAAGAGTTGCGCTCGCGGCTTTGGTTTGCCGTC
GTGAATCAGGACAGGTGCGCGAGAGAGAATCAAGTCTACATGGAACGATTTGCTGACATGGCCACAAGGATCTTG
ACGGCCGGCTTGGCCCGCCCCTGTCTCATCCCTTTACAGCACGTCCGGACCGAAATCGCCGAGTTTCTCGACGCC
GCGCGGCCTAGCAAGAGTACGGAGATGAACTGCTCCAGGGAGAGTGTCACCTACTTCCGCCGCCTCATGTCAGTC
CGCCTCGTCTGTCCGCTAGATCGTAACCCTAACGCGAATGAATGCAGAACTCTACACGAGATTCTAGGCGCCGCC
GTCGAATCCATCTACAGCTCCAACATCAACTCATCCAGCCGCCTTCCGCTGGGAGACCTCCTAGCCAAGACCATG
GATCTCGTCTGGAAGCTCGACCAGTGGCGGGAGAAGACGGATCCCGCCGGAGCCGTCCTGACCGGCGCCGACTTT
AGCCAGTGGCCCACGGCCGCGTTTGAGACGAACCGGTTCAACGTCCTCCTCACCATCTTCCACTATCGGGCCCAG
ATGCTGATGCACGGGTCCCTACTGATGAGGGTCCTCGAGCGGGCCACGGGGTCCTCGGATCAGGACGCCTCCTCG
GCCGCTGTTCATGACGCGTCGTTGTCTCTGCTGAGCAACTACCTGCGGGACCTTCAGGAGTGGCTGCGGTTCATC
GACGGCATCCTGAATCATGAGCGGTCGTTTCTTCCTAGCAACGCCGTCTGGTGGACGAGCAATTACATGAGTGAG
TTGGCCTCGTTCCCTCTACTCCAAACCTGCAACCTCCCCCCTTGTCGTTCTCTCTCCCTCTCTCTCTCTCTCCCT
CTCTCTCTTTGTGTGTGTGTGTGTGTGTGTATGTGTGAGCGAGTGAGTGTGTGCTGACAGCCGACCAAGTGCTCT
CCACCTGCATACACGCCTTTGCCTTTTGGCTGCTGACGGACAACATCAAGTCCAGCTCGGCAACGCTAGGCATGC
ACAGCGCCGACGCCGAGGTATTCCTACGGTCCAGCCTCGACACGCTGAAACGCGTCGGGGGCTCGAGCATCATGA
GTCGCAAGGCCCATCGCTGCCTGGAGCGCTACCTGCACATCATCAAGAGCATCCGCCCCGCAAGGCGCGGCTCGG
TCGCTTCGGACGCCGGGCCGGCATCCGCGCCGGCCTCCGCGCACGGCAGCAGTTTCGGAGGCGACCAGACCGAGG
CGGCGGCCCTGACGCCCCTGACGCCCGTCGCGCTGGTGACGTCTCAGTGGAACTCGTCGGGAGACGGAGGCGGCG
GCGGCGGCCTCGGGCCCGGACCCGACGTGTATGGGGGACCGATGGATGTGTTTGGGGGAATGGGTCAGGTCGATT
TCATGTATGCGGGCTTTTTGGGTATCGAACGGGCCATCAGCGACTATGATGCCGCCGGCTTTATCTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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