Protein ID | Ophio5|8564 |
Gene name | |
Location | scaffold_978:53..2124 |
Strand | - |
Gene length (bp) | 2071 |
Transcript length (bp) | 2028 |
Coding sequence length (bp) | 2025 |
Protein length (aa) | 675 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF11915 | DUF3433 | Protein of unknown function (DUF3433) | 1.4E-19 | 254 | 342 |
PF11915 | DUF3433 | Protein of unknown function (DUF3433) | 1.1E-18 | 532 | 614 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Cell membrane|Lysosome/Vacuole | Signal peptide|Transmembrane domain | 0.0692 | 0.1363 | 0.0347 | 0.6129 | 0.0409 | 0.0258 | 0.4482 | 0.6401 | 0.2069 | 0.0071 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 209 | 231 | 22 |
2 | 251 | 273 | 22 |
3 | 320 | 342 | 22 |
4 | 368 | 390 | 22 |
5 | 397 | 419 | 22 |
6 | 497 | 519 | 22 |
7 | 591 | 613 | 22 |
8 | 646 | 668 | 22 |
Orthofinder run ID | 4 |
Orthogroup | 699 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophio5|8564 MVLDHGGGQPAPRHDGRPSWPGPLSYNSSRYAPVPTRSAAVEEHVDEEAYDLSLLSTAAPMAYDDGLPVFDVTSA LGPLAAHDAEFIKKLQAQEASGTLTGGLGRGFSSMSSSSSSSSGAARVRVRDADLLRSSRPTSFRRRRSSQRQTI RAAGQDEANRRGRIIEVIAEEDISNLDGGCDVRFHNTSSATRVFYPQPDWRPVSMRCTYLSMLVAVSVGLAVASE LSYRTYGGRDRPLVRFTSASELRPSVYVAVRFAPSLCAVTYAVLWQLLDLDVRRLEAFHQLSRDGGSAAANSVNV DYLTGYTLLRPLCALRRRHYAVVLSSLVAILAASLVPTLAVGSLVLTPGRAERRADPGMEKQLLLSDTWSRLLTA TLVVCAVAGIVLLWILESRRSGLLADAQGIAGLASMAVVSHMLMDFKDLDTATHGDIHDRLKRKHYVLRNSSLAP LDDDDDDDDDDDDDDDDCCAETWCRSDEVLDTKPSSMSPHPLILRPVGWLPFLASAVSFMAFIPAMLFTGADAIA DRAPWAVTAVAVGLKLSWNAMETAVRVMEPFYILSRRHAPAKTLLLDYTVQPFGWLPVRALLNGHVLVFAVGLGS VLTEFLTIFVSGLTMVDGHELISHHDSPTAGDTGQETPASFFASLAFSELILAYIFVVGVVVFVVVVVRKGRGRG |
Coding | >Ophio5|8564 ATGGTACTAGATCATGGAGGCGGCCAACCCGCACCTCGTCATGATGGCCGTCCGTCGTGGCCCGGTCCGCTCTCG TACAACTCGTCGCGATACGCACCCGTGCCGACTCGGTCTGCGGCGGTCGAGGAACATGTCGACGAGGAGGCCTAC GATCTGTCGCTTCTGTCCACTGCGGCGCCCATGGCCTACGATGATGGCCTGCCCGTCTTTGACGTTACCTCGGCC TTGGGCCCTCTGGCCGCGCACGATGCTGAATTTATCAAGAAGCTTCAGGCTCAGGAGGCGAGTGGCACCTTGACT GGAGGGCTGGGAAGGGGGTTTTCGTCCATGTCGTCGTCGTCGTCGTCGTCGTCCGGAGCGGCCCGGGTTCGAGTC CGAGACGCGGACCTGCTTCGATCATCGCGACCGACATCGTTCCGGCGCCGACGGTCTTCGCAAAGACAGACGATC CGCGCAGCTGGTCAGGACGAAGCCAACCGGCGCGGACGCATCATCGAGGTCATCGCCGAGGAAGACATCAGCAAT CTCGATGGCGGATGCGACGTTCGCTTCCACAACACATCATCCGCTACCCGCGTCTTCTACCCGCAGCCCGATTGG CGGCCCGTCTCCATGCGCTGCACCTATCTCTCCATGCTGGTCGCCGTCTCCGTCGGGCTGGCCGTCGCCTCCGAG CTGTCGTATCGCACCTATGGCGGGAGAGACCGGCCCCTGGTGCGCTTCACTTCGGCCAGCGAGCTGCGGCCGAGC GTGTACGTGGCGGTGCGATTTGCGCCTTCTCTGTGCGCTGTGACCTATGCAGTCTTGTGGCAGCTTCTCGATCTT GACGTACGTCGACTCGAGGCCTTCCATCAGCTTTCGAGGGATGGCGGCTCGGCGGCGGCCAACTCGGTCAACGTC GACTATCTCACGGGATATACACTGCTGCGACCGCTGTGCGCGCTGCGACGCCGCCATTACGCCGTCGTCCTGTCC TCGCTGGTCGCCATCCTGGCTGCTTCGCTGGTGCCCACCTTGGCCGTCGGCTCTCTCGTATTGACACCCGGCAGG GCTGAGCGCAGGGCCGATCCTGGCATGGAAAAGCAGCTGCTGCTGTCGGATACCTGGTCGCGCCTCCTGACAGCC ACCTTGGTCGTCTGCGCCGTGGCCGGCATCGTCCTGCTGTGGATATTGGAGTCGAGACGTTCGGGCCTGCTAGCG GACGCGCAGGGCATCGCAGGACTGGCCAGCATGGCCGTTGTCAGCCACATGCTCATGGACTTCAAGGATCTGGAT ACGGCGACTCACGGAGATATACATGACCGTCTCAAGCGTAAACACTACGTCCTGCGCAACTCGTCTCTAGCGCCC CTAGACGATGATGACGACGACGACGACGACGACGACGACGACGACGACGATTGTTGTGCCGAGACATGGTGCAGA TCGGATGAGGTGCTCGACACGAAGCCGTCATCGATGAGCCCGCATCCTCTGATCCTCCGGCCGGTCGGTTGGCTC CCTTTCCTGGCCAGCGCGGTGAGCTTCATGGCCTTCATACCGGCCATGCTCTTCACCGGCGCCGACGCGATTGCA GATCGGGCGCCGTGGGCCGTCACCGCCGTCGCGGTTGGCCTCAAGCTCTCGTGGAACGCCATGGAAACGGCGGTG CGGGTGATGGAGCCCTTTTATATCCTCTCGCGACGACACGCACCGGCCAAGACGTTGCTGCTCGACTACACCGTC CAGCCGTTTGGATGGCTACCGGTGCGGGCGCTTCTCAACGGACATGTGCTCGTCTTCGCCGTAGGGCTCGGCAGC GTACTGACCGAGTTCCTGACCATCTTCGTGTCGGGACTGACCATGGTCGACGGCCACGAGCTCATAAGCCACCAC GACAGTCCTACCGCAGGGGACACGGGCCAGGAGACGCCAGCCTCATTCTTCGCCTCCCTCGCCTTTTCTGAACTG ATTCTTGCCTACATCTTCGTCGTCGGCGTCGTCGTCTTCGTCGTCGTAGTCGTCAGGAAGGGAAGAGGACGAGGC |
Transcript | >Ophio5|8564 ATGGTACTAGATCATGGAGGCGGCCAACCCGCACCTCGTCATGATGGCCGTCCGTCGTGGCCCGGTCCGCTCTCG TACAACTCGTCGCGATACGCACCCGTGCCGACTCGGTCTGCGGCGGTCGAGGAACATGTCGACGAGGAGGCCTAC GATCTGTCGCTTCTGTCCACTGCGGCGCCCATGGCCTACGATGATGGCCTGCCCGTCTTTGACGTTACCTCGGCC TTGGGCCCTCTGGCCGCGCACGATGCTGAATTTATCAAGAAGCTTCAGGCTCAGGAGGCGAGTGGCACCTTGACT GGAGGGCTGGGAAGGGGGTTTTCGTCCATGTCGTCGTCGTCGTCGTCGTCGTCCGGAGCGGCCCGGGTTCGAGTC CGAGACGCGGACCTGCTTCGATCATCGCGACCGACATCGTTCCGGCGCCGACGGTCTTCGCAAAGACAGACGATC CGCGCAGCTGGTCAGGACGAAGCCAACCGGCGCGGACGCATCATCGAGGTCATCGCCGAGGAAGACATCAGCAAT CTCGATGGCGGATGCGACGTTCGCTTCCACAACACATCATCCGCTACCCGCGTCTTCTACCCGCAGCCCGATTGG CGGCCCGTCTCCATGCGCTGCACCTATCTCTCCATGCTGGTCGCCGTCTCCGTCGGGCTGGCCGTCGCCTCCGAG CTGTCGTATCGCACCTATGGCGGGAGAGACCGGCCCCTGGTGCGCTTCACTTCGGCCAGCGAGCTGCGGCCGAGC GTGTACGTGGCGGTGCGATTTGCGCCTTCTCTGTGCGCTGTGACCTATGCAGTCTTGTGGCAGCTTCTCGATCTT GACGTACGTCGACTCGAGGCCTTCCATCAGCTTTCGAGGGATGGCGGCTCGGCGGCGGCCAACTCGGTCAACGTC GACTATCTCACGGGATATACACTGCTGCGACCGCTGTGCGCGCTGCGACGCCGCCATTACGCCGTCGTCCTGTCC TCGCTGGTCGCCATCCTGGCTGCTTCGCTGGTGCCCACCTTGGCCGTCGGCTCTCTCGTATTGACACCCGGCAGG GCTGAGCGCAGGGCCGATCCTGGCATGGAAAAGCAGCTGCTGCTGTCGGATACCTGGTCGCGCCTCCTGACAGCC ACCTTGGTCGTCTGCGCCGTGGCCGGCATCGTCCTGCTGTGGATATTGGAGTCGAGACGTTCGGGCCTGCTAGCG GACGCGCAGGGCATCGCAGGACTGGCCAGCATGGCCGTTGTCAGCCACATGCTCATGGACTTCAAGGATCTGGAT ACGGCGACTCACGGAGATATACATGACCGTCTCAAGCGTAAACACTACGTCCTGCGCAACTCGTCTCTAGCGCCC CTAGACGATGATGACGACGACGACGACGACGACGACGACGACGACGACGATTGTTGTGCCGAGACATGGTGCAGA TCGGATGAGGTGCTCGACACGAAGCCGTCATCGATGAGCCCGCATCCTCTGATCCTCCGGCCGGTCGGTTGGCTC CCTTTCCTGGCCAGCGCGGTGAGCTTCATGGCCTTCATACCGGCCATGCTCTTCACCGGCGCCGACGCGATTGCA GATCGGGCGCCGTGGGCCGTCACCGCCGTCGCGGTTGGCCTCAAGCTCTCGTGGAACGCCATGGAAACGGCGGTG CGGGTGATGGAGCCCTTTTATATCCTCTCGCGACGACACGCACCGGCCAAGACGTTGCTGCTCGACTACACCGTC CAGCCGTTTGGATGGCTACCGGTGCGGGCGCTTCTCAACGGACATGTGCTCGTCTTCGCCGTAGGGCTCGGCAGC GTACTGACCGAGTTCCTGACCATCTTCGTGTCGGGACTGACCATGGTCGACGGCCACGAGCTCATAAGCCACCAC GACAGTCCTACCGCAGGGGACACGGGCCAGGAGACGCCAGCCTCATTCTTCGCCTCCCTCGCCTTTTCTGAACTG ATTCTTGCCTACATCTTCGTCGTCGGCGTCGTCGTCTTCGTCGTCGTAGTCGTCAGGAAGGGAAGAGGACGAGGC TGA |
Gene | >Ophio5|8564 ATGGTACTAGATCATGGAGGCGGCCAACCCGCACCTCGTCATGATGGCCGTCCGTCGTGGCCCGGTCCGCTCTCG TACAACTCGTCGCGATACGCACCCGTGCCGACTCGGTCTGCGGCGGTCGAGGAACATGTCGACGAGGAGGCCTAC GATCTGTCGCTTCTGTCCACTGCGGCGCCCATGGCCTACGATGATGGCCTGCCCGTCTTTGACGTTACCTCGGCC TTGGGCCCTCTGGCCGCGCACGATGCTGAATTTATCAAGAAGCTTCAGGCTCAGGAGGCGAGTGGCACCTTGACT GGAGGGCTGGGAAGGGGGTTTTCGTCCATGTCGTCGTCGTCGTCGTCGTCGTCCGGAGCGGCCCGGGTTCGAGTC CGAGACGCGGACCTGCTTCGATCATCGCGACCGACATCGTTCCGGCGCCGACGGTCTTCGCAAAGACAGACGATC CGCGCAGCTGGTCAGGACGAAGCCAACCGGCGCGGACGCATCATCGAGGTCATCGCCGAGGAAGACATCAGCAAT CTCGATGGCGGATGCGACGTTCGCTTCCACAACACATCATCCGCTACCCGCGTCTTCTACCCGCAGCCCGATTGG CGGCCCGTCTCCATGCGCTGCACCTATCTCTCCATGCTGGTCGCCGTCTCCGTCGGGCTGGCCGTCGCCTCCGAG CTGTCGTATCGCACCTATGGCGGGAGAGACCGGCCCCTGGTGCGCTTCACTTCGGCCAGCGAGCTGCGGCCGAGC GTGTACGTGGCGGTGCGATTTGCGCCTTCTCTGTGCGCTGTGACCTATGCAGTCTTGTGGCAGCTTCTCGATCTT GACGTACGTCGACTCGAGGCCTTCCATCAGCTTTCGAGGGATGGCGGCTCGGCGGCGGCCAACTCGGTCAACGTC GACTATCTCACGGGATATACACTGCTGCGACCGCTGTGCGCGCTGCGACGCCGCCATTACGCCGTCGTCCTGTCC TCGCTGGTCGCCATCCTGGCTGCTTCGCTGGTGCCCACCTTGGCCGTCGGCTCTCTCGTATTGACACCCGGCAGG GCTGAGCGCAGGGCCGATCCTGGCATGGAAAAGCAGCTGCTGCTGTCGGATACCTGGTCGCGCCTCCTGACAGCC ACCTTGGTCGTCTGCGCCGTGGCCGGCATCGTCCTGCTGTGGATATTGGAGTCGAGACGTTCGGGCCTGCTAGCG GACGCGCAGGGCATCGCAGGACTGGCCAGCATGGCCGTTGTCAGCCACATGCTCATGGACTTCAAGGATCTGGAT ACGGCGACTCACGGAGATATACATGACCGTCTCAAGCGTAAACACTACGTCCTGCGCAACTCGTCTCTAGCGCCC CTAGACGATGATGACGACGACGACGACGACGACGACGACGACGACGACGATTGTTGTGCCGAGACATGGTGCAGA TCGGATGAGGTGCTCGACACGAAGCCGTCATCGATGAGCCCGCATCCTCTGATCCTCCGGCCGGTCGGTTGGCTC CCTTTCCTGGCCAGCGCGGTGAGCTTCATGGCCTTCATACCGGCCATGCTCTTCACCGGCGCCGACGCGATTGCA GATCGGGCGCCGTGGGCCGTCACCGCCGTCGCGGTTGGCCTCAAGCTCTCGTGGAACGCCATGGAAACGGCGGTG CGGGTGATGGAGCCCTTTTATATCCTCTCGCGACGACACGCACCGGCCAAGACGTTGCTGCTCGACTACACCGTC CAGCCGTTTGGATGGCTACCGGTGCGGGCGCTTCTCAACGGACATGTGCTCGTCTTCGCCGTAGGGCTCGGCAGC GTACTGACCGAGTTCCTGACCATCTTCGTGTCGGGACTGACCATGGTCGACGGCCACGAGCTCATAAGCCACCAC GACAGTCCTACCGCAGGGGACACGGGCCAGGAGACGCCAGCCTCATTCTTCGCCTCCCTCGCCTTTTCTGAACTG ATTCTTGCCTACATCTTCGTCGTCGGCGTCGTCGTCTTCGTCGTCGTAGTCGTCGTCATCGTCGTCGACGTCGTC CATGGCCTGGGATTGAAGCTAGAGGAAGGGAAGAGGACGAGGCTGA |