© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ophio5|8563 |
| Gene name | |
| Location | scaffold_977:319..1510 |
| Strand | + |
| Gene length (bp) | 1191 |
| Transcript length (bp) | 984 |
| Coding sequence length (bp) | 981 |
| Protein length (aa) | 327 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF08241 | Methyltransf_11 | Methyltransferase domain | 9.6E-18 | 91 | 211 |
| PF13649 | Methyltransf_25 | Methyltransferase domain | 5.1E-15 | 90 | 207 |
| PF13489 | Methyltransf_23 | Methyltransferase domain | 8.6E-15 | 83 | 257 |
| PF13847 | Methyltransf_31 | Methyltransferase domain | 2.5E-06 | 150 | 215 |
| PF02353 | CMAS | Mycolic acid cyclopropane synthetase | 1.2E-10 | 31 | 127 |
| PF08242 | Methyltransf_12 | Methyltransferase domain | 3.3E-11 | 91 | 209 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q9ZSK1|GTOMC_ARATH | Tocopherol O-methyltransferase, chloroplastic OS=Arabidopsis thaliana GN=VTE4 PE=1 SV=2 | 26 | 325 | 2.0E-31 |
| sp|Q6ZIK0|GTOMC_ORYSJ | Probable tocopherol O-methyltransferase, chloroplastic OS=Oryza sativa subsp. japonica GN=VTE4 PE=2 SV=1 | 28 | 325 | 8.0E-30 |
| sp|P74388|BQMT_SYNY3 | 2-methyl-6-phytyl-1,4-hydroquinone methyltransferase OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=sll0418 PE=1 SV=1 | 47 | 320 | 1.0E-23 |
| sp|Q8KZ94|REBMT_NOCAE | Demethylrebeccamycin-D-glucose O-methyltransferase OS=Lechevalieria aerocolonigenes GN=rebM PE=1 SV=1 | 31 | 221 | 2.0E-22 |
| sp|L7IP31|ERG6_MAGOY | Sterol 24-C-methyltransferase OS=Magnaporthe oryzae (strain Y34) GN=ERG6 PE=2 SV=1 | 33 | 293 | 1.0E-21 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q9ZSK1|GTOMC_ARATH | Tocopherol O-methyltransferase, chloroplastic OS=Arabidopsis thaliana GN=VTE4 PE=1 SV=2 | 26 | 325 | 2.0E-31 |
| sp|Q6ZIK0|GTOMC_ORYSJ | Probable tocopherol O-methyltransferase, chloroplastic OS=Oryza sativa subsp. japonica GN=VTE4 PE=2 SV=1 | 28 | 325 | 8.0E-30 |
| sp|P74388|BQMT_SYNY3 | 2-methyl-6-phytyl-1,4-hydroquinone methyltransferase OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=sll0418 PE=1 SV=1 | 47 | 320 | 1.0E-23 |
| sp|Q8KZ94|REBMT_NOCAE | Demethylrebeccamycin-D-glucose O-methyltransferase OS=Lechevalieria aerocolonigenes GN=rebM PE=1 SV=1 | 31 | 221 | 2.0E-22 |
| sp|L7IP31|ERG6_MAGOY | Sterol 24-C-methyltransferase OS=Magnaporthe oryzae (strain Y34) GN=ERG6 PE=2 SV=1 | 33 | 293 | 1.0E-21 |
| sp|P0CT10|ERG6_MAGO7 | Sterol 24-C-methyltransferase OS=Magnaporthe oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) GN=ERG6 PE=3 SV=1 | 33 | 293 | 1.0E-21 |
| sp|Q9KJ21|SDMT_HALHR | Sarcosine/dimethylglycine N-methyltransferase OS=Halorhodospira halochloris PE=1 SV=1 | 39 | 260 | 7.0E-15 |
| sp|Q94JS4|SMT3B_ARATH | 24-methylenesterol C-methyltransferase 3 OS=Arabidopsis thaliana GN=SMT3 PE=2 SV=1 | 23 | 273 | 1.0E-14 |
| sp|Q6ZIX2|SMT1_ORYSJ | Cycloartenol-C-24-methyltransferase 1 OS=Oryza sativa subsp. japonica GN=Smt1-1 PE=2 SV=1 | 32 | 261 | 6.0E-14 |
| sp|Q39227|SMT2_ARATH | 24-methylenesterol C-methyltransferase 2 OS=Arabidopsis thaliana GN=SMT2 PE=1 SV=2 | 12 | 254 | 1.0E-13 |
| sp|Q759S7|ERG6_ASHGO | Sterol 24-C-methyltransferase OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=ERG6 PE=3 SV=1 | 35 | 284 | 3.0E-13 |
| sp|Q6CYB3|ERG6_KLULA | Sterol 24-C-methyltransferase OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=ERG6 PE=3 SV=1 | 35 | 241 | 6.0E-13 |
| sp|Q875K1|ERG6_CLAL4 | Sterol 24-C-methyltransferase OS=Clavispora lusitaniae (strain ATCC 42720) GN=ERG6 PE=3 SV=1 | 33 | 281 | 6.0E-13 |
| sp|Q6BRB7|ERG6_DEBHA | Sterol 24-C-methyltransferase OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) GN=ERG6 PE=3 SV=1 | 35 | 277 | 8.0E-13 |
| sp|Q9P3R1|ERG6_NEUCR | Sterol 24-C-methyltransferase erg-4 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=erg-4 PE=3 SV=1 | 33 | 268 | 9.0E-13 |
| sp|O74198|ERG6_CANAL | Sterol 24-C-methyltransferase OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=ERG6 PE=3 SV=1 | 35 | 269 | 5.0E-12 |
| sp|P25087|ERG6_YEAST | Sterol 24-C-methyltransferase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ERG6 PE=1 SV=4 | 35 | 284 | 5.0E-12 |
| sp|Q54I98|SMT1_DICDI | Probable cycloartenol-C-24-methyltransferase 1 OS=Dictyostelium discoideum GN=smt1 PE=1 SV=1 | 32 | 278 | 9.0E-12 |
| sp|Q6C2D9|ERG6_YARLI | Sterol 24-C-methyltransferase OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=ERG6 PE=3 SV=1 | 25 | 256 | 1.0E-11 |
| sp|O82427|SMT2_ORYSJ | 24-methylenesterol C-methyltransferase 2 OS=Oryza sativa subsp. japonica GN=Smt2-1 PE=2 SV=2 | 26 | 261 | 3.0E-11 |
| sp|Q9LM02|SMT1_ARATH | Cycloartenol-C-24-methyltransferase OS=Arabidopsis thaliana GN=SMT1 PE=1 SV=1 | 13 | 259 | 6.0E-11 |
| sp|H2E7T6|SQMT2_BOTBR | Squalene methyltransferase 2 OS=Botryococcus braunii GN=TMT-2 PE=1 SV=1 | 36 | 300 | 7.0E-11 |
| sp|Q9TYP1|STRM1_CAEEL | Sterol 4-C-methyltransferase strm-1 OS=Caenorhabditis elegans GN=strm-1 PE=3 SV=2 | 83 | 246 | 2.0E-10 |
| sp|Q9KJ20|GSDMT_ACTHA | Glycine/sarcosine/dimethylglycine N-methyltransferase OS=Actinopolyspora halophila PE=1 SV=1 | 39 | 259 | 7.0E-10 |
| sp|H2E7T8|SMTL1_BOTBR | Sterol methyltransferase-like 1 OS=Botryococcus braunii GN=SMT-1 PE=2 SV=1 | 32 | 226 | 1.0E-09 |
| sp|H2E7T5|SQMT1_BOTBR | Squalene methyltransferase 1 OS=Botryococcus braunii GN=TMT-1 PE=1 SV=1 | 36 | 226 | 3.0E-09 |
| sp|H2E7T7|BOMT_BOTBR | Botryococcene C-methyltransferase OS=Botryococcus braunii GN=TMT-3 PE=1 SV=1 | 36 | 221 | 2.0E-08 |
| sp|Q02PX7|UBIG_PSEAB | Ubiquinone biosynthesis O-methyltransferase OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=ubiG PE=3 SV=1 | 90 | 212 | 3.0E-08 |
| sp|Q9M571|PEAMT_SPIOL | Phosphoethanolamine N-methyltransferase OS=Spinacia oleracea GN=PEAMT PE=1 SV=1 | 81 | 219 | 6.0E-08 |
| sp|Q83WC3|SDMT_APHHA | Sarcosine/dimethylglycine N-methyltransferase OS=Aphanothece halophytica PE=1 SV=1 | 26 | 225 | 7.0E-08 |
| sp|Q96WX4|ERG6_PNECA | Sterol 24-C-methyltransferase OS=Pneumocystis carinii GN=erg6 PE=2 SV=1 | 33 | 222 | 1.0E-07 |
| sp|A6V2Q4|UBIG_PSEA7 | Ubiquinone biosynthesis O-methyltransferase OS=Pseudomonas aeruginosa (strain PA7) GN=ubiG PE=3 SV=1 | 90 | 212 | 2.0E-07 |
| sp|B7V9J5|UBIG_PSEA8 | Ubiquinone biosynthesis O-methyltransferase OS=Pseudomonas aeruginosa (strain LESB58) GN=ubiG PE=3 SV=1 | 90 | 212 | 2.0E-07 |
| sp|Q9HZ63|UBIG_PSEAE | Ubiquinone biosynthesis O-methyltransferase OS=Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=ubiG PE=3 SV=1 | 90 | 212 | 2.0E-07 |
| sp|H2E7T9|SMTL2_BOTBR | Sterol methyltransferase-like 2 OS=Botryococcus braunii GN=SMT-2 PE=2 SV=1 | 32 | 312 | 2.0E-07 |
| sp|Q47GP8|UBIG_DECAR | Ubiquinone biosynthesis O-methyltransferase OS=Dechloromonas aromatica (strain RCB) GN=ubiG PE=3 SV=1 | 39 | 212 | 3.0E-07 |
| sp|Q9FR44|PEAM1_ARATH | Phosphoethanolamine N-methyltransferase 1 OS=Arabidopsis thaliana GN=NMT1 PE=1 SV=1 | 90 | 216 | 1.0E-06 |
| sp|P46326|YXBB_BACSU | Uncharacterized protein YxbB OS=Bacillus subtilis (strain 168) GN=yxbB PE=3 SV=1 | 86 | 233 | 1.0E-06 |
| sp|P0A9H7|CFA_ECOLI | Cyclopropane-fatty-acyl-phospholipid synthase OS=Escherichia coli (strain K12) GN=cfa PE=1 SV=2 | 33 | 125 | 6.0E-06 |
| sp|P0A9H8|CFA_ECOL6 | Cyclopropane-fatty-acyl-phospholipid synthase OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) GN=cfa PE=3 SV=2 | 33 | 125 | 6.0E-06 |
| sp|Q1QEI9|UBIG_PSYCK | Ubiquinone biosynthesis O-methyltransferase OS=Psychrobacter cryohalolentis (strain K5) GN=ubiG PE=3 SV=2 | 49 | 212 | 7.0E-06 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0008168 | methyltransferase activity | Yes |
| GO:0003824 | catalytic activity | No |
| GO:0016740 | transferase activity | No |
| GO:0003674 | molecular_function | No |
| GO:0016741 | transferase activity, transferring one-carbon groups | No |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Cytoplasm | 0.4782 | 0.1776 | 0.1288 | 0.0393 | 0.4114 | 0.4497 | 0.5224 | 0.2706 | 0.3685 | 0.0553 |
| Orthofinder run ID | 4 |
| Orthogroup | 6541 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophio5|8563 MSVPENSTPLSRQYEMQLGQPHEEMEALKGKIKKHYDIASDSYLDIWGEHIHHGYWPTEESEANDSKETAELNLI NLLLSISKLDKNVAVLDVGCGVGGSSRHLASQLGCNVTGITISSRQVELAYSLSKAEAEKSGGGAAEPAADGFVR LGSGQVRFLEMDAETMADHFGGDSGTFDVVWIVEALSHFPNKALFFENAHRVLRPGGKLVLADWFKKEGLDEEAL RKEIKPIEDGMLLPPLCTNQDYVRLASTAGLRALADPMDISDKVRKTWDMTWSMVQKPALWQFALSHGRDALAFL QSFRAMRSGYYKGSFRYAVMAFQKPGA |
| Coding | >Ophio5|8563 ATGTCGGTGCCCGAAAACAGCACGCCGCTCAGCAGGCAGTATGAGATGCAGCTGGGGCAGCCACACGAAGAGATG GAGGCCCTCAAGGGCAAGATCAAGAAACATTATGACATTGCCAGCGATAGTTATCTCGACATCTGGGGCGAGCAC ATCCATCACGGATACTGGCCCACAGAAGAGTCGGAAGCCAATGACAGCAAGGAAACGGCCGAGCTCAATCTGATC AATCTGCTACTCTCCATCTCCAAGCTGGACAAGAATGTGGCCGTCCTGGACGTCGGGTGCGGCGTCGGCGGATCC TCGCGCCACCTCGCCTCCCAGCTCGGCTGCAACGTGACGGGCATCACCATCTCGTCCCGGCAGGTAGAGCTGGCC TATAGCCTTTCCAAGGCCGAGGCGGAGAAGAGTGGAGGAGGCGCGGCCGAGCCCGCCGCCGATGGATTCGTCCGT CTCGGCTCCGGCCAGGTCCGCTTCCTGGAAATGGACGCCGAGACCATGGCGGATCACTTTGGCGGGGATTCGGGC ACCTTTGACGTTGTGTGGATTGTCGAGGCCCTCAGCCACTTTCCCAACAAGGCCCTGTTCTTCGAAAATGCGCAC AGAGTTCTTCGTCCCGGCGGCAAGCTCGTCTTGGCGGATTGGTTCAAGAAGGAGGGTTTGGATGAAGAAGCTCTG CGGAAGGAGATCAAGCCCATCGAAGACGGTATGCTTCTTCCACCTCTCTGCACGAACCAGGACTACGTCCGTCTC GCCAGTACGGCAGGGCTGCGCGCCTTGGCAGATCCGATGGATATTAGCGACAAGGTTCGCAAGACATGGGATATG ACCTGGTCCATGGTCCAGAAGCCGGCTCTCTGGCAATTTGCCCTTTCCCATGGCAGGGACGCTCTGGCCTTTCTC CAGAGCTTCCGGGCCATGCGCAGTGGTTACTACAAGGGGAGTTTTCGATATGCCGTCATGGCCTTTCAAAAGCCG GGGGCG |
| Transcript | >Ophio5|8563 ATGTCGGTGCCCGAAAACAGCACGCCGCTCAGCAGGCAGTATGAGATGCAGCTGGGGCAGCCACACGAAGAGATG GAGGCCCTCAAGGGCAAGATCAAGAAACATTATGACATTGCCAGCGATAGTTATCTCGACATCTGGGGCGAGCAC ATCCATCACGGATACTGGCCCACAGAAGAGTCGGAAGCCAATGACAGCAAGGAAACGGCCGAGCTCAATCTGATC AATCTGCTACTCTCCATCTCCAAGCTGGACAAGAATGTGGCCGTCCTGGACGTCGGGTGCGGCGTCGGCGGATCC TCGCGCCACCTCGCCTCCCAGCTCGGCTGCAACGTGACGGGCATCACCATCTCGTCCCGGCAGGTAGAGCTGGCC TATAGCCTTTCCAAGGCCGAGGCGGAGAAGAGTGGAGGAGGCGCGGCCGAGCCCGCCGCCGATGGATTCGTCCGT CTCGGCTCCGGCCAGGTCCGCTTCCTGGAAATGGACGCCGAGACCATGGCGGATCACTTTGGCGGGGATTCGGGC ACCTTTGACGTTGTGTGGATTGTCGAGGCCCTCAGCCACTTTCCCAACAAGGCCCTGTTCTTCGAAAATGCGCAC AGAGTTCTTCGTCCCGGCGGCAAGCTCGTCTTGGCGGATTGGTTCAAGAAGGAGGGTTTGGATGAAGAAGCTCTG CGGAAGGAGATCAAGCCCATCGAAGACGGTATGCTTCTTCCACCTCTCTGCACGAACCAGGACTACGTCCGTCTC GCCAGTACGGCAGGGCTGCGCGCCTTGGCAGATCCGATGGATATTAGCGACAAGGTTCGCAAGACATGGGATATG ACCTGGTCCATGGTCCAGAAGCCGGCTCTCTGGCAATTTGCCCTTTCCCATGGCAGGGACGCTCTGGCCTTTCTC CAGAGCTTCCGGGCCATGCGCAGTGGTTACTACAAGGGGAGTTTTCGATATGCCGTCATGGCCTTTCAAAAGCCG GGGGCGTGA |
| Gene | >Ophio5|8563 ATGTCGGTGCCCGAAAACAGCACGCCGCTCAGCAGGCAGTATGAGATGCAGCTGGGGCAGCCACACGAAGAGATG GAGGCCCTCAAGGGCAAGATCAAGAAACATTATGACATTGCCAGCGATAGTTATCTCGACATCTGGTATGGCAGG GAAAAACCCCCCTTTCGCTCAACATCATGGCATCGGAACGGTTGACATGAGTCCCAGGGGCGAGCACATCCATCA CGGATACTGGCCCACAGAAGAGTCGGAAGCCAATGACAGCAAGGAAACGGCCGAGCTCAATCTGATCAATCTGCT ACTCTCCATCTCCAAGCTGGACAAGAATGTGGCCGTCCTGGACGTCGGGTGCGGCGTCGGCGGATCCTCGCGCCA CCTCGCCTCCCAGCTCGGCTGCAACGTGACGGGCATCACCATCTCGTCCCGGCAGGTAGAGCTGGCCTATAGCCT TTCCAAGGCCGAGGCGGAGAAGAGTGGAGGAGGCGCGGCCGAGCCCGCCGCCGATGGATTCGTCCGTCTCGGCTC CGGCCAGGTCCGCTTCCTGGAAATGGACGCCGAGACCATGGCGGATCACTTTGGCGGGGATTCGGGCACCTTTGA CGTTGTGTGGATTGTCGAGGCCCTCAGCCACTTTCCCAACAAGGCCCTGTTCTTCGAAAATGCGCACAGAGTTCT TCGTCCCGGCGGCAAGCTCGTCTTGGCGGATTGGTTCAAGAAGGAGGGTTTGGATGAAGAAGCTCTGCGGAAGGA GATCAAGCCCATCGAAGGTATGTAGGACTTTTTTTGCATCAAACATGTCCGGGCCAGACTTGGCTCATATCCCAT GTTCATCACACACAGACGGTATGCTTCTTCCACCTCTCTGCACGAACCAGGACTACGTCCGTCTCGCCAGTACGG CAGGGCTGCGCGCCTTGGCAGATCCGATGGATATTAGCGACAAGGTTCGCAAGACATGGTGCGTGACGATGAACC TTGTACAATCAGTGGACGGGGCATCTATCTATTGACGCTACACCACAAAGGGATATGACCTGGTCCATGGTCCAG AAGCCGGCTCTCTGGCAATTTGCCCTTTCCCATGGCAGGGACGCTCTGGCCTTTCTCCAGAGCTTCCGGGCCATG CGCAGTGGTTACTACAAGGGGAGTTTTCGATATGCCGTCATGGCCTTTCAAAAGCCGGGGGCGTGA |