Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|8556
Gene name
Locationscaffold_97:44349..46158
Strand-
Gene length (bp)1809
Transcript length (bp)1668
Coding sequence length (bp)1665
Protein length (aa) 555

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF04082 Fungal_trans Fungal specific transcription factor domain 1.1E-10 103 232

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|O59741|YN25_SCHPO Uncharacterized transcriptional regulatory protein C530.05 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC530.05 PE=3 SV=2 146 291 1.0E-08
sp|O59744|YN28_SCHPO Uncharacterized transcriptional regulatory protein C530.08 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC530.08 PE=3 SV=1 133 357 1.0E-07
sp|P87000|ACU15_NEUCR Transcriptional activator protein acu-15 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=acu-15 PE=1 SV=2 44 375 4.0E-07
sp|O14130|YF54_SCHPO Uncharacterized transcriptional regulatory protein C3C7.04 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC3C7.04 PE=3 SV=1 199 422 4.0E-07

GO

GO Term Description Terminal node
GO:0006351 transcription, DNA-templated Yes
GO:0008270 zinc ion binding Yes
GO:0003677 DNA binding Yes
GO:0046872 metal ion binding No
GO:0003674 molecular_function No
GO:0044237 cellular metabolic process No
GO:0043169 cation binding No
GO:0043167 ion binding No
GO:0008152 metabolic process No
GO:0006139 nucleobase-containing compound metabolic process No
GO:1901576 organic substance biosynthetic process No
GO:1901360 organic cyclic compound metabolic process No
GO:0046483 heterocycle metabolic process No
GO:0003676 nucleic acid binding No
GO:0090304 nucleic acid metabolic process No
GO:0044238 primary metabolic process No
GO:0018130 heterocycle biosynthetic process No
GO:0006725 cellular aromatic compound metabolic process No
GO:0008150 biological_process No
GO:0019438 aromatic compound biosynthetic process No
GO:0016070 RNA metabolic process No
GO:0009058 biosynthetic process No
GO:0044249 cellular biosynthetic process No
GO:0034641 cellular nitrogen compound metabolic process No
GO:0006807 nitrogen compound metabolic process No
GO:1901362 organic cyclic compound biosynthetic process No
GO:0046914 transition metal ion binding No
GO:0097159 organic cyclic compound binding No
GO:0034654 nucleobase-containing compound biosynthetic process No
GO:0071704 organic substance metabolic process No
GO:0097659 nucleic acid-templated transcription No
GO:0009059 macromolecule biosynthetic process No
GO:1901363 heterocyclic compound binding No
GO:0044271 cellular nitrogen compound biosynthetic process No
GO:0032774 RNA biosynthetic process No
GO:0009987 cellular process No
GO:0043170 macromolecule metabolic process No
GO:0005488 binding No

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Nucleus Nuclear export signal 0.3149 0.832 0.0234 0.0993 0.1255 0.0104 0.0281 0.136 0.1734 0.0053

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

Transcription Factor Class
(based on PFAM domains)
Fungal Specific TF

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Expression values

Label Description Expression (RPKM) Confidence interval (low) Confidence interval (high)
SC16a Pure fungal culture 158.97 80.71 237.23
CcL In ants, during behavior modification 179.23 83.54 274.92
CcD In ants, recently dead 139.78 71.30 208.26

Differential expression

Label1 Label2 Q-value Significant difference
SC16a CcL 0.678167 no
SC16a CcD 0.647560 no
CcL CcD 0.351992 no

Orthologs

Orthofinder run ID4
Orthogroup2201
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|7748
Ophiocordyceps australis map64 (Brazil) OphauB2|7012
Ophiocordyceps camponoti-floridani Ophcf2|01122
Ophiocordyceps camponoti-rufipedis Ophun1|7185
Ophiocordyceps kimflemingae Ophio5|8556 (this protein)
Ophiocordyceps subramaniannii Hirsu2|2766

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|8556
MGYRCVDDVSDQEQQSSEIAAAAAPAMDAPCDPLFDFDKDEIVRLCQFHQDEVGIMYPVLDMHAVMAHARNLADM
LAEARSQRRPLEAINDDKTLQLKIVMCCALVVEQHGHSEEATRLYESMDAVLNRKLMAEASDVASLPLFCLIAGY
RFLSSEEILAWRVMGHVVRLCVELGIHQKRGLMGISDEAERINALNSFWVAYVLDRRWGFATGLPFTLQDDEIDP
QLPFPDQHPFLVAMITYSRLGAKVWRQVSHFGPVLARELRQEEIEDLDREILEWYETVPEDVKVRSWDKDKSMTT
YDLRRLRIWIYLRFNQLRIWLYTPILHSATSIMSNPRQAQRVVDLAKDTIQYLHHLNNTTNVYRNGQVFYHQFLA
SSIAVVFLASVHAPVRFSALCRQEFYVALELVKDLSSKSWVSKRLWRTIKSLKDVAPRVGLSPDIETRSAIALHM
TTFPSLGMMSPPQQQQQQQQQQQQQQQQQQQHQHQHQQQQPEQNPDSPWLDNGKELQTELSKIFEDYVGTSAGHG
STLALSSSPGAGGDAFSTSGTLFQDLREMF
Coding >Ophio5|8556
ATGGGCTATCGTTGTGTCGACGACGTCAGCGACCAGGAACAGCAATCGAGCGAAATCGCCGCCGCCGCCGCCCCT
GCCATGGACGCGCCTTGCGATCCGCTCTTCGATTTCGACAAGGACGAGATTGTTCGCCTTTGCCAATTCCACCAG
GACGAGGTCGGCATCATGTATCCCGTCCTCGACATGCACGCCGTCATGGCCCACGCCAGGAACTTAGCCGACATG
CTGGCCGAGGCCCGCAGTCAGCGGCGCCCGCTCGAGGCCATCAACGACGACAAGACGCTGCAACTCAAGATAGTC
ATGTGCTGTGCCCTCGTCGTCGAGCAGCACGGTCACAGCGAAGAGGCGACTCGCCTGTACGAGAGCATGGACGCC
GTTCTCAACCGCAAGCTCATGGCCGAAGCCAGTGACGTGGCCAGCCTGCCTCTGTTTTGCCTCATTGCCGGCTAT
CGCTTCCTGTCGAGCGAGGAGATACTCGCGTGGCGCGTCATGGGCCACGTCGTCCGACTTTGCGTTGAGCTGGGC
ATCCACCAGAAGAGGGGCTTGATGGGCATCTCCGACGAGGCGGAGAGGATCAATGCCCTCAACAGCTTCTGGGTC
GCCTACGTCCTGGACCGGCGGTGGGGTTTCGCCACCGGCCTCCCCTTTACTCTGCAGGACGACGAGATCGACCCC
CAGCTACCGTTTCCGGACCAACATCCCTTCCTCGTTGCCATGATAACGTATTCTCGGCTAGGCGCCAAAGTCTGG
CGGCAGGTGTCGCACTTCGGGCCCGTGCTGGCGCGCGAACTGCGACAGGAGGAGATTGAGGACCTTGATCGCGAG
ATTCTGGAGTGGTACGAGACGGTGCCCGAGGATGTCAAGGTGCGGAGCTGGGACAAGGACAAGTCGATGACGACG
TATGATCTGCGCCGGCTGAGGATCTGGATCTATCTGAGGTTCAACCAGCTCCGCATATGGTTGTACACGCCCATT
CTGCACAGCGCGACGAGCATCATGTCGAACCCGCGACAAGCTCAGCGCGTCGTCGACCTCGCCAAGGACACGATC
CAGTACCTGCACCACCTCAACAACACGACGAACGTGTACCGTAACGGCCAGGTCTTCTACCACCAGTTCCTAGCG
TCGTCCATCGCCGTCGTCTTCCTGGCGTCGGTGCATGCGCCCGTACGGTTCAGCGCCCTCTGCCGCCAAGAGTTT
TACGTGGCCCTCGAACTGGTCAAGGATTTGTCCTCCAAGAGCTGGGTCTCGAAGCGGCTGTGGCGCACCATCAAA
TCTCTAAAGGACGTGGCGCCGCGCGTCGGGCTCAGTCCGGACATTGAAACCCGCTCAGCCATCGCGCTGCACATG
ACGACGTTTCCGAGCCTGGGCATGATGAGTCCTCCGCAACAGCAGCAGCAGCAGCAACAGCAGCAGCAGCAGCAA
CAACAACAACAACAACAGCACCAGCATCAGCACCAACAACAACAGCCAGAGCAAAATCCGGATTCTCCGTGGCTA
GACAACGGCAAAGAGCTCCAGACGGAGCTGTCCAAGATCTTTGAAGACTATGTCGGCACCAGCGCCGGCCATGGC
TCGACGCTCGCGTTGTCCTCTTCGCCGGGCGCCGGTGGCGACGCCTTTTCCACCAGCGGAACCCTATTCCAGGAT
CTGCGCGAGATGTTT
Transcript >Ophio5|8556
ATGGGCTATCGTTGTGTCGACGACGTCAGCGACCAGGAACAGCAATCGAGCGAAATCGCCGCCGCCGCCGCCCCT
GCCATGGACGCGCCTTGCGATCCGCTCTTCGATTTCGACAAGGACGAGATTGTTCGCCTTTGCCAATTCCACCAG
GACGAGGTCGGCATCATGTATCCCGTCCTCGACATGCACGCCGTCATGGCCCACGCCAGGAACTTAGCCGACATG
CTGGCCGAGGCCCGCAGTCAGCGGCGCCCGCTCGAGGCCATCAACGACGACAAGACGCTGCAACTCAAGATAGTC
ATGTGCTGTGCCCTCGTCGTCGAGCAGCACGGTCACAGCGAAGAGGCGACTCGCCTGTACGAGAGCATGGACGCC
GTTCTCAACCGCAAGCTCATGGCCGAAGCCAGTGACGTGGCCAGCCTGCCTCTGTTTTGCCTCATTGCCGGCTAT
CGCTTCCTGTCGAGCGAGGAGATACTCGCGTGGCGCGTCATGGGCCACGTCGTCCGACTTTGCGTTGAGCTGGGC
ATCCACCAGAAGAGGGGCTTGATGGGCATCTCCGACGAGGCGGAGAGGATCAATGCCCTCAACAGCTTCTGGGTC
GCCTACGTCCTGGACCGGCGGTGGGGTTTCGCCACCGGCCTCCCCTTTACTCTGCAGGACGACGAGATCGACCCC
CAGCTACCGTTTCCGGACCAACATCCCTTCCTCGTTGCCATGATAACGTATTCTCGGCTAGGCGCCAAAGTCTGG
CGGCAGGTGTCGCACTTCGGGCCCGTGCTGGCGCGCGAACTGCGACAGGAGGAGATTGAGGACCTTGATCGCGAG
ATTCTGGAGTGGTACGAGACGGTGCCCGAGGATGTCAAGGTGCGGAGCTGGGACAAGGACAAGTCGATGACGACG
TATGATCTGCGCCGGCTGAGGATCTGGATCTATCTGAGGTTCAACCAGCTCCGCATATGGTTGTACACGCCCATT
CTGCACAGCGCGACGAGCATCATGTCGAACCCGCGACAAGCTCAGCGCGTCGTCGACCTCGCCAAGGACACGATC
CAGTACCTGCACCACCTCAACAACACGACGAACGTGTACCGTAACGGCCAGGTCTTCTACCACCAGTTCCTAGCG
TCGTCCATCGCCGTCGTCTTCCTGGCGTCGGTGCATGCGCCCGTACGGTTCAGCGCCCTCTGCCGCCAAGAGTTT
TACGTGGCCCTCGAACTGGTCAAGGATTTGTCCTCCAAGAGCTGGGTCTCGAAGCGGCTGTGGCGCACCATCAAA
TCTCTAAAGGACGTGGCGCCGCGCGTCGGGCTCAGTCCGGACATTGAAACCCGCTCAGCCATCGCGCTGCACATG
ACGACGTTTCCGAGCCTGGGCATGATGAGTCCTCCGCAACAGCAGCAGCAGCAGCAACAGCAGCAGCAGCAGCAA
CAACAACAACAACAACAGCACCAGCATCAGCACCAACAACAACAGCCAGAGCAAAATCCGGATTCTCCGTGGCTA
GACAACGGCAAAGAGCTCCAGACGGAGCTGTCCAAGATCTTTGAAGACTATGTCGGCACCAGCGCCGGCCATGGC
TCGACGCTCGCGTTGTCCTCTTCGCCGGGCGCCGGTGGCGACGCCTTTTCCACCAGCGGAACCCTATTCCAGGAT
CTGCGCGAGATGTTTTGA
Gene >Ophio5|8556
ATGGGCTATCGTTGTGTCGACGACGTCAGCGACCAGGAACAGCAATCGAGCGAAATCGCCGCCGCCGCCGCCCCT
GCCATGGACGCGCCTTGCGATCCGCTCTTCGATTTCGACAAGGACGAGATTGTTCGCCTTTGCCAATTCCACCAG
GACGAGGTCGGCATCATGTATCCCGTCCTCGACATGCACGCCGTCATGGCCCACGCCAGGAACTTAGCCGACATG
CTGGCCGAGGCCCGCAGTCAGCGGCGCCCGCTCGAGGCCATCAACGACGACAAGACGCTGCAACTCAAGATAGTC
ATGTGCTGTGCCCTCGTCGTCGAGCAGCACGGTCACAGCGAAGAGGCGACTCGCCTGTACGAGAGCATGGACGCC
GTTCTCAACCGCAAGCTCATGGCCGAAGCCAGTGACGTGGCCAGCCTGCCTCTGTTTTGCCTCATTGCCGGCTAT
CGCTTCCTGTCGAGCGAGGAGATACTCGCGTGGCGCGTCATGGGCCACGTCGTCCGACTTTGCGTTGAGCTGGGC
ATCCACCAGAAGAGGGGCTTGATGGGCATCTCCGACGAGGCGGAGAGGATCAATGCCCTCAACAGCTTCTGGGTC
GCCTACGTCCTGGACCGGCGGTGGGGTTTCGCCACCGGCCTCCCCTTTACTCTGCAGGACGACGAGATCGACCCC
CAGCTACCGTTTCCGGTGAGTGAGAGATATCCGATACCTGTTGACCCTTTTTCTCTCCTTTGTTCGCCGAACTCT
GACCTCTCTTCTTGTTCCCCTCTCAAGGACCAACATCCCTTCCTCGTTGCCATGATAACGTATTCTCGGCTAGGC
GCCAAAGTCTGGCGGCAGGTGTCGCACTTCGGGCCCGTGCTGGCGCGCGAACTGCGACAGGAGGAGATTGAGGAC
CTTGATCGCGAGATTCTGGAGTGGTACGAGACGGTGCCCGAGGATGTCAAGGTGCGGAGCTGGGACAAGGACAAG
TCGATGACGACGTATGATCTGCGCCGGCTGAGGATCTGGATCTATCTGAGGTTCAACCAGGTGAGAAGCCCTGGC
GGGACGGGGTGAAGGCGGCCGCTGACATGGACGTGCAAGCTCCGCATATGGTTGTACACGCCCATTCTGCACAGC
GCGACGAGCATCATGTCGAACCCGCGACAAGCTCAGCGCGTCGTCGACCTCGCCAAGGACACGATCCAGTACCTG
CACCACCTCAACAACACGACGAACGTGTACCGTAACGGCCAGGTCTTCTACCACCAGTTCCTAGCGTCGTCCATC
GCCGTCGTCTTCCTGGCGTCGGTGCATGCGCCCGTACGGTTCAGCGCCCTCTGCCGCCAAGAGTTTTACGTGGCC
CTCGAACTGGTCAAGGATTTGTCCTCCAAGAGCTGGGTCTCGAAGCGGCTGTGGCGCACCATCAAATCTCTAAAG
GACGTGGCGCCGCGCGTCGGGCTCAGTCCGGACATTGAAACCCGCTCAGCCATCGCGCTGCACATGACGACGTTT
CCGAGCCTGGGCATGATGAGTCCTCCGCAACAGCAGCAGCAGCAGCAACAGCAGCAGCAGCAGCAACAACAACAA
CAACAACAGCACCAGCATCAGCACCAACAACAACAGCCAGAGCAAAATCCGGATTCTCCGTGGCTAGACAACGGC
AAAGAGCTCCAGACGGAGCTGTCCAAGATCTTTGAAGACTATGTCGGCACCAGCGCCGGCCATGGCTCGACGCTC
GCGTTGTCCTCTTCGCCGGGCGCCGGTGGCGACGCCTTTTCCACCAGCGGAACCCTATTCCAGGATCTGCGCGAG
ATGTTTTGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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