Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|8541
Gene name
Locationscaffold_97:19854..21139
Strand+
Gene length (bp)1285
Transcript length (bp)1200
Coding sequence length (bp)1197
Protein length (aa) 399

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 49 0.5

Transmembrane Domains

Domain # Start End Length
1 21 43 22
2 53 75 22
3 199 218 19
4 222 244 22
5 285 307 22
6 355 377 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|8541
MATHGTGGLVGFRPEPNCGRGTVSILWSCFSTIALSLWASLHLDLSEAGIEMRIGMFVGCLLLPEAGVAHSYLVL
MGAVVFADPDPPPLRRSGGDRRLSGDFRDIHSDHRPSPNEHDGSGGDDSADEELNQPVRLTPPFLLELISERHID
DSQHDAPVEGKGAAPSDQNMSAYNCLTLDMFPSAHDINRRAKTDAMVKILALVQALWFAVNVVFRLVVGSGLSLL
ETMTIAYVLCGIVLYILWFAKPQGLEEPFTLPLSLAARLPPPPPSPRRQDPRSTAQMARLAAGILLVALFSGIHL
AAWNYPFPSHVEAWLWRGSVIASWALASLPILNPVLPESWYSSPGWYGSFGKPLIPFLATPYVIARLITFALVFA
AFRAVPSSIYDQPDWSSYWISLGG
Coding >Ophio5|8541
ATGGCGACCCACGGCACCGGCGGCCTCGTCGGCTTCCGGCCGGAGCCCAACTGCGGCCGCGGCACAGTCAGTATC
CTCTGGAGCTGCTTTTCCACTATTGCGCTGTCGCTGTGGGCTTCGCTTCATCTCGATCTCTCTGAAGCCGGCATC
GAGATGCGCATCGGCATGTTCGTTGGCTGTCTGCTCCTCCCGGAGGCTGGCGTCGCCCATTCGTATCTCGTCCTG
ATGGGCGCCGTCGTTTTTGCCGATCCGGACCCTCCGCCGCTGCGACGGTCCGGTGGAGACCGGCGTCTGAGCGGT
GACTTCCGGGATATCCACTCTGACCACCGGCCTTCACCGAACGAGCATGATGGCAGCGGAGGGGACGATAGCGCC
GATGAGGAATTGAATCAGCCCGTCCGCTTGACGCCGCCCTTTCTCCTGGAGCTCATCAGCGAGCGCCATATCGAT
GACAGCCAGCACGACGCCCCCGTCGAGGGCAAGGGCGCCGCCCCCAGCGATCAGAACATGTCGGCATACAACTGT
CTCACTCTCGACATGTTCCCCTCGGCCCACGACATCAACCGACGGGCCAAGACAGACGCCATGGTCAAGATACTC
GCCCTCGTTCAAGCCCTCTGGTTCGCAGTCAACGTCGTCTTCCGCCTCGTCGTCGGCTCCGGCCTTTCCCTTCTC
GAGACCATGACGATAGCCTACGTCCTATGCGGCATCGTCCTCTACATCCTGTGGTTCGCCAAGCCACAGGGTCTC
GAGGAGCCCTTTACCCTGCCACTCTCCCTTGCCGCTCGGCTACCGCCGCCTCCGCCAAGCCCGCGCCGCCAGGAT
CCCCGATCTACCGCCCAGATGGCCCGCCTCGCCGCCGGCATCCTGCTCGTCGCCCTCTTCTCCGGAATCCACCTC
GCCGCGTGGAACTACCCGTTTCCTTCCCATGTCGAGGCCTGGCTGTGGAGGGGGAGCGTCATCGCGTCTTGGGCC
CTGGCCTCGTTGCCGATACTCAACCCCGTCCTGCCCGAATCCTGGTATTCCAGCCCCGGCTGGTACGGCAGCTTC
GGCAAACCCCTGATTCCCTTCCTGGCGACGCCTTATGTCATTGCGAGACTCATCACATTTGCCCTCGTCTTCGCC
GCCTTTCGCGCCGTCCCCTCGTCCATCTACGACCAGCCTGATTGGTCTTCTTACTGGATAAGTCTGGGCGGC
Transcript >Ophio5|8541
ATGGCGACCCACGGCACCGGCGGCCTCGTCGGCTTCCGGCCGGAGCCCAACTGCGGCCGCGGCACAGTCAGTATC
CTCTGGAGCTGCTTTTCCACTATTGCGCTGTCGCTGTGGGCTTCGCTTCATCTCGATCTCTCTGAAGCCGGCATC
GAGATGCGCATCGGCATGTTCGTTGGCTGTCTGCTCCTCCCGGAGGCTGGCGTCGCCCATTCGTATCTCGTCCTG
ATGGGCGCCGTCGTTTTTGCCGATCCGGACCCTCCGCCGCTGCGACGGTCCGGTGGAGACCGGCGTCTGAGCGGT
GACTTCCGGGATATCCACTCTGACCACCGGCCTTCACCGAACGAGCATGATGGCAGCGGAGGGGACGATAGCGCC
GATGAGGAATTGAATCAGCCCGTCCGCTTGACGCCGCCCTTTCTCCTGGAGCTCATCAGCGAGCGCCATATCGAT
GACAGCCAGCACGACGCCCCCGTCGAGGGCAAGGGCGCCGCCCCCAGCGATCAGAACATGTCGGCATACAACTGT
CTCACTCTCGACATGTTCCCCTCGGCCCACGACATCAACCGACGGGCCAAGACAGACGCCATGGTCAAGATACTC
GCCCTCGTTCAAGCCCTCTGGTTCGCAGTCAACGTCGTCTTCCGCCTCGTCGTCGGCTCCGGCCTTTCCCTTCTC
GAGACCATGACGATAGCCTACGTCCTATGCGGCATCGTCCTCTACATCCTGTGGTTCGCCAAGCCACAGGGTCTC
GAGGAGCCCTTTACCCTGCCACTCTCCCTTGCCGCTCGGCTACCGCCGCCTCCGCCAAGCCCGCGCCGCCAGGAT
CCCCGATCTACCGCCCAGATGGCCCGCCTCGCCGCCGGCATCCTGCTCGTCGCCCTCTTCTCCGGAATCCACCTC
GCCGCGTGGAACTACCCGTTTCCTTCCCATGTCGAGGCCTGGCTGTGGAGGGGGAGCGTCATCGCGTCTTGGGCC
CTGGCCTCGTTGCCGATACTCAACCCCGTCCTGCCCGAATCCTGGTATTCCAGCCCCGGCTGGTACGGCAGCTTC
GGCAAACCCCTGATTCCCTTCCTGGCGACGCCTTATGTCATTGCGAGACTCATCACATTTGCCCTCGTCTTCGCC
GCCTTTCGCGCCGTCCCCTCGTCCATCTACGACCAGCCTGATTGGTCTTCTTACTGGATAAGTCTGGGCGGCTGA
Gene >Ophio5|8541
ATGGCGACCCACGGCACCGGCGGCCTCGTCGGCTTCCGGCCGGAGCCCAACTGCGGCCGCGGCACAGTCAGTATC
CTCTGGAGCTGCTTTTCCACTATTGCGCTGTCGCTGTGGGCTTCGCTTCATCTCGATCTCTCTGAAGCCGGCATC
GAGATGCGCATCGGCATGTTCGTTGGCTGTCTGCTCCTCCCGGAGGCTGGCGTCGCCGTTGCTACGGGCGAGTGC
GCCACTGCGTTGTACTGGCGTGACCGTATCCGTGCCCACCGTGGCTGGGAATCTTTGGTCCCTGAAGCATTCGTA
TCTCGTCCTGATGGGCGCCGTCGTTTTTGCCGATCCGGACCCTCCGCCGCTGCGACGGTCCGGTGGAGACCGGCG
TCTGAGCGGTGACTTCCGGGATATCCACTCTGACCACCGGCCTTCACCGAACGAGCATGATGGCAGCGGAGGGGA
CGATAGCGCCGATGAGGAATTGAATCAGCCCGTCCGCTTGACGCCGCCCTTTCTCCTGGAGCTCATCAGCGAGCG
CCATATCGATGACAGCCAGCACGACGCCCCCGTCGAGGGCAAGGGCGCCGCCCCCAGCGATCAGAACATGTCGGC
ATACAACTGTCTCACTCTCGACATGTTCCCCTCGGCCCACGACATCAACCGACGGGCCAAGACAGACGCCATGGT
CAAGATACTCGCCCTCGTTCAAGCCCTCTGGTTCGCAGTCAACGTCGTCTTCCGCCTCGTCGTCGGCTCCGGCCT
TTCCCTTCTCGAGACCATGACGATAGCCTACGTCCTATGCGGCATCGTCCTCTACATCCTGTGGTTCGCCAAGCC
ACAGGGTCTCGAGGAGCCCTTTACCCTGCCACTCTCCCTTGCCGCTCGGCTACCGCCGCCTCCGCCAAGCCCGCG
CCGCCAGGATCCCCGATCTACCGCCCAGATGGCCCGCCTCGCCGCCGGCATCCTGCTCGTCGCCCTCTTCTCCGG
AATCCACCTCGCCGCGTGGAACTACCCGTTTCCTTCCCATGTCGAGGCCTGGCTGTGGAGGGGGAGCGTCATCGC
GTCTTGGGCCCTGGCCTCGTTGCCGATACTCAACCCCGTCCTGCCCGAATCCTGGTATTCCAGCCCCGGCTGGTA
CGGCAGCTTCGGCAAACCCCTGATTCCCTTCCTGGCGACGCCTTATGTCATTGCGAGACTCATCACATTTGCCCT
CGTCTTCGCCGCCTTTCGCGCCGTCCCCTCGTCCATCTACGACCAGCCTGATTGGTCTTCTTACTGGATAAGTCT
GGGCGGCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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