Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|8519
Gene name
Locationscaffold_96:42940..44696
Strand-
Gene length (bp)1756
Transcript length (bp)1401
Coding sequence length (bp)1398
Protein length (aa) 466

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00002 7tm_2 7 transmembrane receptor (Secretin family) 3.9E-08 24 200

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|Q54U75|CRLA_DICDI Cyclic AMP receptor-like protein A OS=Dictyostelium discoideum GN=crlA PE=2 SV=1 11 214 2.0E-09

GO

GO Term Description Terminal node
GO:0016021 integral component of membrane Yes
GO:0007186 G protein-coupled receptor signaling pathway Yes
GO:0004930 G protein-coupled receptor activity Yes
GO:0007165 signal transduction No
GO:0060089 molecular transducer activity No
GO:0009987 cellular process No
GO:0050789 regulation of biological process No
GO:0065007 biological regulation No
GO:0110165 cellular anatomical entity No
GO:0031224 intrinsic component of membrane No
GO:0005575 cellular_component No
GO:0003674 molecular_function No
GO:0004888 transmembrane signaling receptor activity No
GO:0038023 signaling receptor activity No
GO:0050794 regulation of cellular process No
GO:0008150 biological_process No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 65 0.5

Transmembrane Domains

Domain # Start End Length
1 30 52 22
2 59 81 22
3 105 124 19
4 131 153 22
5 180 202 22
6 336 358 22
7 368 390 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|8519
MAFLPSTSSLPTAERLTPGQIEVLVALERVGGSVSLVALLFIFIAYALFRPVRNVQNTFIVFASVSNVGASVASI
IALDGINAGTQTPLCQTQSFLFEMFMQSDPWWSLAMAVNVFLVFYYRTSPDSFRRWWWIYCLICYGGPFVIALTL
LLIKSKERGPVYGQATIWCWVDSKWDSIRIFTYYMLIWICIIGSFVCYILVGYHVFRSRNRLRSFPASKNREAGH
YDRTVLEQPSVDDCCGTRTTDVQVVHTSASVRGNMLLEPKKAHVTRTGQNSISSPERRPVAVQYFSTATSPVPRH
SNFIPPFGEGVRMSRRFASKFVVDDPIKRAYLRTSLLFALSVLVTWIPSSLNRIHGWLAGASPFEFHVATAAVLP
LQGVWNCFIFFVTSWKVVKRCIRGMPSEPSYSARGESMGTVDRAVGRERAVHRDDIRSETDFDDDGESGNMGSDV
ELRQVSDHGGKETSSV
Coding >Ophio5|8519
ATGGCATTTCTGCCGTCAACCAGCTCGCTGCCCACGGCCGAGCGCCTCACGCCGGGGCAGATCGAGGTCCTCGTT
GCGCTCGAGCGCGTCGGCGGCTCCGTCAGCCTCGTCGCTCTCTTGTTCATCTTCATCGCCTATGCCCTGTTCCGA
CCCGTGCGGAACGTCCAAAATACCTTCATCGTCTTTGCCAGCGTGTCGAATGTCGGGGCTAGCGTTGCGAGCATC
ATTGCCCTCGACGGGATTAATGCCGGCACGCAGACGCCGCTGTGTCAGACACAAAGCTTTTTGTTTGAAATGTTC
ATGCAATCCGATCCCTGGTGGTCCCTTGCCATGGCCGTCAACGTCTTCCTCGTCTTCTACTACCGCACCTCGCCC
GACTCATTCCGACGCTGGTGGTGGATTTATTGCCTCATCTGCTACGGTGGTCCGTTCGTCATTGCCCTGACACTT
CTCCTAATTAAGAGCAAGGAGCGAGGGCCCGTCTACGGTCAAGCCACGATTTGGTGTTGGGTCGACTCTAAGTGG
GATAGCATCCGCATCTTTACCTACTACATGCTCATCTGGATCTGCATCATCGGCTCTTTTGTCTGCTACATCTTG
GTTGGATACCACGTCTTTCGCTCGCGGAACCGTCTCCGCAGCTTTCCCGCCTCGAAAAACCGGGAGGCGGGCCAC
TACGACAGGACGGTCCTGGAACAGCCTTCTGTGGACGACTGCTGCGGTACGAGGACCACCGATGTTCAGGTAGTG
CACACATCGGCCTCGGTCAGGGGTAACATGCTCCTTGAGCCCAAGAAAGCGCATGTTACGCGTACCGGGCAGAAC
AGCATCTCATCTCCCGAGAGGCGACCCGTCGCCGTTCAGTACTTCTCGACGGCGACGTCGCCCGTCCCTCGCCAC
AGCAACTTCATTCCGCCCTTTGGAGAGGGGGTCAGGATGAGCAGACGGTTCGCATCCAAGTTTGTCGTCGATGAC
CCCATCAAGCGAGCGTACCTACGGACGAGTCTACTGTTTGCCCTGAGCGTCCTCGTCACTTGGATCCCAAGCAGC
CTGAACCGGATCCACGGCTGGCTCGCCGGCGCCTCGCCGTTTGAGTTTCACGTCGCCACAGCGGCTGTGCTGCCT
CTTCAGGGCGTTTGGAATTGCTTCATCTTCTTCGTCACCAGCTGGAAAGTTGTCAAGCGGTGCATCCGCGGCATG
CCTTCCGAGCCGTCCTACTCAGCCAGGGGTGAGTCGATGGGCACCGTGGACCGGGCTGTTGGCCGAGAGCGGGCC
GTCCATCGAGACGATATCCGATCCGAGACAGATTTCGACGACGACGGCGAATCGGGCAACATGGGAAGCGACGTC
GAGCTACGGCAGGTGTCCGACCATGGGGGCAAGGAGACGTCGAGTGTA
Transcript >Ophio5|8519
ATGGCATTTCTGCCGTCAACCAGCTCGCTGCCCACGGCCGAGCGCCTCACGCCGGGGCAGATCGAGGTCCTCGTT
GCGCTCGAGCGCGTCGGCGGCTCCGTCAGCCTCGTCGCTCTCTTGTTCATCTTCATCGCCTATGCCCTGTTCCGA
CCCGTGCGGAACGTCCAAAATACCTTCATCGTCTTTGCCAGCGTGTCGAATGTCGGGGCTAGCGTTGCGAGCATC
ATTGCCCTCGACGGGATTAATGCCGGCACGCAGACGCCGCTGTGTCAGACACAAAGCTTTTTGTTTGAAATGTTC
ATGCAATCCGATCCCTGGTGGTCCCTTGCCATGGCCGTCAACGTCTTCCTCGTCTTCTACTACCGCACCTCGCCC
GACTCATTCCGACGCTGGTGGTGGATTTATTGCCTCATCTGCTACGGTGGTCCGTTCGTCATTGCCCTGACACTT
CTCCTAATTAAGAGCAAGGAGCGAGGGCCCGTCTACGGTCAAGCCACGATTTGGTGTTGGGTCGACTCTAAGTGG
GATAGCATCCGCATCTTTACCTACTACATGCTCATCTGGATCTGCATCATCGGCTCTTTTGTCTGCTACATCTTG
GTTGGATACCACGTCTTTCGCTCGCGGAACCGTCTCCGCAGCTTTCCCGCCTCGAAAAACCGGGAGGCGGGCCAC
TACGACAGGACGGTCCTGGAACAGCCTTCTGTGGACGACTGCTGCGGTACGAGGACCACCGATGTTCAGGTAGTG
CACACATCGGCCTCGGTCAGGGGTAACATGCTCCTTGAGCCCAAGAAAGCGCATGTTACGCGTACCGGGCAGAAC
AGCATCTCATCTCCCGAGAGGCGACCCGTCGCCGTTCAGTACTTCTCGACGGCGACGTCGCCCGTCCCTCGCCAC
AGCAACTTCATTCCGCCCTTTGGAGAGGGGGTCAGGATGAGCAGACGGTTCGCATCCAAGTTTGTCGTCGATGAC
CCCATCAAGCGAGCGTACCTACGGACGAGTCTACTGTTTGCCCTGAGCGTCCTCGTCACTTGGATCCCAAGCAGC
CTGAACCGGATCCACGGCTGGCTCGCCGGCGCCTCGCCGTTTGAGTTTCACGTCGCCACAGCGGCTGTGCTGCCT
CTTCAGGGCGTTTGGAATTGCTTCATCTTCTTCGTCACCAGCTGGAAAGTTGTCAAGCGGTGCATCCGCGGCATG
CCTTCCGAGCCGTCCTACTCAGCCAGGGGTGAGTCGATGGGCACCGTGGACCGGGCTGTTGGCCGAGAGCGGGCC
GTCCATCGAGACGATATCCGATCCGAGACAGATTTCGACGACGACGGCGAATCGGGCAACATGGGAAGCGACGTC
GAGCTACGGCAGGTGTCCGACCATGGGGGCAAGGAGACGTCGAGTGTATGA
Gene >Ophio5|8519
ATGGCATTTCTGCCGTCAACCAGCTCGCTGCCCACGGCCGAGCGCCTCACGCCGGGGCAGATCGAGGTCCTCGTT
GCGCTCGAGCGCGTCGGCGGCTCCGTCAGCCTCGTCGCTCTCTTGTTCATCTTCATCGCCTATGCCCTGTTCCGA
CCCGTGCGGAACGTCCAAAATACCTTCATCGTCTTTGCCAGCGTGTCGAATGTCGGGGCTAGCGTTGCGAGCATC
ATTGCCCTCGACGGGATTAATGCCGGCACGCAGACGCCGCTGTGTCAGACACAAAGCTTTTTGTTTGAAATGTTT
GTTCCCCCTTTTCTCCAAACTTCTTCTTTGTCGTCCTTTCATCTCTTCATCCCAAAATCTGCCCTGTTCTCTCTT
CTTTGTTCAGTCAGGGGCTCTTTGATCTTTGTTTACAGTCGTTTCTGTTTACCTGCCGCTGTCAAATCTTGACTC
TGGCCTTACCCATGGATTCGGAAGACATGGTTACACCAGAGCAACTCGGCATGGCTGACCCCCCCCCCCCCCTTT
TCCAGGTTCATGCAATCCGATCCCTGGTGGTCCCTTGCCATGGCCGTCAACGTCTTCCTCGTCTTCTACTACCGC
ACCTCGCCCGACTCATTCCGACGCTGGTGGTGGATTTATTGCCTCATCTGCTACGGTGGTCCGTTCGTCATTGCC
CTGACACTTCTCCTAATTAAGAGCAAGGAGCGAGGGCCCGTCTACGGTCAAGCCACGGTACGTCGGTGGTCTTAG
CACGAGCGAGCACCGGCCAGGCAGCTGACTCGGATAGATTTGGTGTTGGGTCGACTCTAAGTGGGATAGCATCCG
CATCTTTACCTACTACATGCTCATCTGGATCTGCATCATCGGCTCTTTTGTCTGCTACATCTTGGTTGGATACCA
CGTCTTTCGCTCGCGGAACCGTCTCCGCAGCTTTCCCGCCTCGAAAAACCGGGAGGCGGGCCACTACGACAGGGT
ATTGCCCTCGTCTCCTATCCCCTCCCCCCATTCGTTGCACTGGTAGCTGACGACTGATACCCAGACGGTCCTGGA
ACAGCCTTCTGTGGACGACTGCTGCGGTACGAGGACCACCGATGTTCAGGTAGTGCACACATCGGCCTCGGTCAG
GGGTAACATGCTCCTTGAGCCCAAGAAAGCGCATGTTACGCGTACCGGGCAGAACAGCATCTCATCTCCCGAGAG
GCGACCCGTCGCCGTTCAGTACTTCTCGACGGCGACGTCGCCCGTCCCTCGCCACAGCAACTTCATTCCGCCCTT
TGGAGAGGGGGTCAGGATGAGCAGACGGTTCGCATCCAAGTTTGTCGTCGATGACCCCATCAAGCGAGCGTACCT
ACGGACGAGTCTACTGTTTGCCCTGAGCGTCCTCGTCACTTGGATCCCAAGCAGCCTGAACCGGATCCACGGCTG
GCTCGCCGGCGCCTCGCCGTTTGAGTTTCACGTCGCCACAGCGGCTGTGCTGCCTCTTCAGGGCGTTTGGAATTG
CTTCATCTTCTTCGTCACCAGCTGGAAAGTTGTCAAGCGGTGCATCCGCGGCATGCCTTCCGAGCCGTCCTACTC
AGCCAGGGGTGAGTCGATGGGCACCGTGGACCGGGCTGTTGGCCGAGAGCGGGCCGTCCATCGAGACGATATCCG
ATCCGAGACAGATTTCGACGACGACGGCGAATCGGGCAACATGGGAAGCGACGTCGAGCTACGGCAGGTGTCCGA
CCATGGGGGCAAGGAGACGTCGAGTGTATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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