Fungal Genomics

at Utrecht University

General Properties

Protein ID	Ophio5\|8514
Gene name
Location	scaffold_96:30751..32255
Strand	-
Gene length (bp)	1504
Transcript length (bp)	1455
Coding sequence length (bp)	1452
Protein length (aa)	484

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF05291	Bystin	Bystin	2.6E-131	156	465

Swissprot hits

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Swissprot ID	Swissprot Description	Start	End	E-value
sp\|O60071\|YBB9_SCHPO	Uncharacterized protein C13G1.09 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC13G1.09 PE=1 SV=1	7	468	8.0E-105
sp\|A9UNU6\|BYST_MONBE	Bystin OS=Monosiga brevicollis GN=bysl PE=3 SV=1	15	468	8.0E-100
sp\|Q80WL2\|BYST_RAT	Bystin OS=Rattus norvegicus GN=Bysl PE=1 SV=3	1	457	2.0E-97
sp\|Q13895\|BYST_HUMAN	Bystin OS=Homo sapiens GN=BYSL PE=1 SV=3	1	457	6.0E-97
sp\|Q5E9N0\|BYST_BOVIN	Bystin OS=Bos taurus GN=BYSL PE=2 SV=1	1	457	4.0E-96

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Swissprot ID	Swissprot Description	Start	End	E-value
sp\|O60071\|YBB9_SCHPO	Uncharacterized protein C13G1.09 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC13G1.09 PE=1 SV=1	7	468	8.0E-105
sp\|A9UNU6\|BYST_MONBE	Bystin OS=Monosiga brevicollis GN=bysl PE=3 SV=1	15	468	8.0E-100
sp\|Q80WL2\|BYST_RAT	Bystin OS=Rattus norvegicus GN=Bysl PE=1 SV=3	1	457	2.0E-97
sp\|Q13895\|BYST_HUMAN	Bystin OS=Homo sapiens GN=BYSL PE=1 SV=3	1	457	6.0E-97
sp\|Q5E9N0\|BYST_BOVIN	Bystin OS=Bos taurus GN=BYSL PE=2 SV=1	1	457	4.0E-96
sp\|P38333\|ENP1_YEAST	Essential nuclear protein 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ENP1 PE=1 SV=1	1	483	9.0E-94
sp\|P51406\|BYS_DROME	Bystin OS=Drosophila melanogaster GN=bys PE=1 SV=2	24	477	1.0E-92
sp\|O54825\|BYST_MOUSE	Bystin OS=Mus musculus GN=Bysl PE=1 SV=3	1	457	2.0E-91
sp\|A7S7F2\|BYST_NEMVE	Bystin OS=Nematostella vectensis GN=bysl PE=3 SV=1	159	465	2.0E-89
sp\|Q20932\|BYN1_CAEEL	Cell adhesion protein byn-1 OS=Caenorhabditis elegans GN=byn-1 PE=3 SV=2	29	457	3.0E-86
sp\|Q54IS0\|BYST_DICDI	Bystin OS=Dictyostelium discoideum GN=bysl PE=3 SV=1	117	464	7.0E-86

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GO

(None)

SignalP

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SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 52	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Expression values

Label	Description	Expression (RPKM)	Confidence interval (low)	Confidence interval (high)
SC16a	Pure fungal culture	70.25	38.09	102.42
CcL	In ants, during behavior modification	91.15	47.88	134.43
CcD	In ants, recently dead	102.30	55.03	149.57

Differential expression

Label1	Label2	Q-value	Significant difference
SC16a	CcL	0.283050	no
SC16a	CcD	0.105694	no
CcL	CcD	0.665685	no

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ophio5\|8514 MPKTSAPVVDRQARRHNPLEDDILTSGLLRSKPNKKRPRGQDADEGFVDSRASRDILRIGRELVDEEAAERAATT TEPIVDSFGYDSRFDEAEADADAAHAYGDDDDWGDEEEAVEEIEIDPQDLETYSKFMPDKNEDDLLKHGWDRRPT GNEQGESVNLADLILEKIAAYEASEARKEAGLPAEEHQLPPRVIEAYTKVGQILSRYKSGPLPKPFKILPTVPHW EDILEITKPESWTPNACYQATRIFVSHKPAVVQRFLEMVVLEKVREDIYENKKLNVHLFNSLKKALYKPAAFFKG FLFPLVGSGTCTLREAHIISAVLARISIPVLHSAAALKGLCDIAAQEASHGTEGGGATNIFIKTLLEKKYALPYQ VIDALVFHFLRFRSVDPAGVKEGEPSTEGDARTRLPVIWHQGLLAFAQRYKGDITEDQREALLDLLLSHGHSAIG PEVRRELLVGRGRGVPLEPQKVAFDGDDTMVIDS
Coding	>Ophio5\|8514 ATGCCCAAAACCTCGGCTCCCGTTGTCGATCGCCAGGCTCGACGCCACAACCCACTCGAAGATGACATACTCACC AGTGGCCTCCTCCGGAGCAAGCCGAACAAGAAGCGGCCCCGCGGCCAGGATGCGGATGAGGGCTTCGTCGACTCC AGGGCGTCTCGGGACATCCTGCGCATAGGCCGCGAGCTGGTGGACGAGGAGGCCGCTGAGAGAGCGGCTACGACG ACGGAACCTATCGTCGACAGCTTTGGGTACGACTCCCGATTCGACGAAGCAGAAGCCGACGCGGACGCCGCCCAC GCCTACGGAGACGACGACGACTGGGGCGACGAGGAGGAAGCCGTGGAGGAGATCGAGATCGATCCCCAAGACCTC GAGACTTACAGCAAATTCATGCCCGACAAAAATGAGGATGATCTGCTCAAGCATGGCTGGGACCGCCGCCCTACA GGCAACGAGCAGGGCGAGAGCGTCAACTTGGCAGACCTTATCCTGGAGAAGATTGCAGCCTACGAGGCCTCCGAG GCCAGGAAGGAGGCCGGTCTGCCCGCGGAAGAACATCAATTACCACCGCGGGTCATCGAGGCCTACACCAAAGTC GGCCAGATCCTGTCCCGGTACAAGTCGGGGCCTCTGCCCAAGCCCTTCAAGATTCTTCCCACCGTCCCCCACTGG GAGGACATACTCGAGATCACCAAGCCAGAGAGCTGGACGCCCAATGCCTGCTACCAGGCCACTCGCATCTTTGTC TCCCACAAGCCCGCCGTCGTCCAACGGTTCCTTGAGATGGTCGTGCTGGAGAAGGTTCGCGAGGACATTTACGAG AACAAGAAGCTCAACGTCCACCTCTTCAATTCACTAAAAAAGGCCCTCTACAAGCCTGCGGCCTTTTTCAAGGGC TTCCTCTTTCCCCTCGTCGGCAGCGGCACCTGCACGCTGAGAGAGGCGCACATCATCTCGGCCGTCCTGGCCAGG ATTTCCATCCCCGTCTTGCACTCGGCCGCAGCCCTGAAGGGTCTGTGCGACATTGCCGCCCAAGAAGCCTCTCAC GGCACCGAGGGCGGCGGCGCCACCAACATCTTCATCAAGACACTCCTAGAGAAGAAGTACGCCCTGCCGTATCAG GTCATTGACGCGCTCGTCTTCCACTTCCTGCGCTTCCGAAGCGTCGACCCTGCCGGCGTCAAGGAGGGTGAGCCT TCAACCGAGGGCGACGCCAGGACCAGGCTGCCCGTCATCTGGCACCAAGGCCTACTGGCCTTTGCGCAGAGGTAC AAGGGGGACATTACCGAGGATCAGCGCGAGGCCCTGCTGGATCTCCTCTTGAGCCACGGGCACTCGGCTATCGGG CCAGAGGTGCGGCGAGAGCTGCTGGTCGGTAGGGGGCGAGGCGTTCCCTTGGAGCCGCAGAAAGTGGCATTTGAT GGCGACGACACTATGGTCATTGACTCG
Transcript	>Ophio5\|8514 ATGCCCAAAACCTCGGCTCCCGTTGTCGATCGCCAGGCTCGACGCCACAACCCACTCGAAGATGACATACTCACC AGTGGCCTCCTCCGGAGCAAGCCGAACAAGAAGCGGCCCCGCGGCCAGGATGCGGATGAGGGCTTCGTCGACTCC AGGGCGTCTCGGGACATCCTGCGCATAGGCCGCGAGCTGGTGGACGAGGAGGCCGCTGAGAGAGCGGCTACGACG ACGGAACCTATCGTCGACAGCTTTGGGTACGACTCCCGATTCGACGAAGCAGAAGCCGACGCGGACGCCGCCCAC GCCTACGGAGACGACGACGACTGGGGCGACGAGGAGGAAGCCGTGGAGGAGATCGAGATCGATCCCCAAGACCTC GAGACTTACAGCAAATTCATGCCCGACAAAAATGAGGATGATCTGCTCAAGCATGGCTGGGACCGCCGCCCTACA GGCAACGAGCAGGGCGAGAGCGTCAACTTGGCAGACCTTATCCTGGAGAAGATTGCAGCCTACGAGGCCTCCGAG GCCAGGAAGGAGGCCGGTCTGCCCGCGGAAGAACATCAATTACCACCGCGGGTCATCGAGGCCTACACCAAAGTC GGCCAGATCCTGTCCCGGTACAAGTCGGGGCCTCTGCCCAAGCCCTTCAAGATTCTTCCCACCGTCCCCCACTGG GAGGACATACTCGAGATCACCAAGCCAGAGAGCTGGACGCCCAATGCCTGCTACCAGGCCACTCGCATCTTTGTC TCCCACAAGCCCGCCGTCGTCCAACGGTTCCTTGAGATGGTCGTGCTGGAGAAGGTTCGCGAGGACATTTACGAG AACAAGAAGCTCAACGTCCACCTCTTCAATTCACTAAAAAAGGCCCTCTACAAGCCTGCGGCCTTTTTCAAGGGC TTCCTCTTTCCCCTCGTCGGCAGCGGCACCTGCACGCTGAGAGAGGCGCACATCATCTCGGCCGTCCTGGCCAGG ATTTCCATCCCCGTCTTGCACTCGGCCGCAGCCCTGAAGGGTCTGTGCGACATTGCCGCCCAAGAAGCCTCTCAC GGCACCGAGGGCGGCGGCGCCACCAACATCTTCATCAAGACACTCCTAGAGAAGAAGTACGCCCTGCCGTATCAG GTCATTGACGCGCTCGTCTTCCACTTCCTGCGCTTCCGAAGCGTCGACCCTGCCGGCGTCAAGGAGGGTGAGCCT TCAACCGAGGGCGACGCCAGGACCAGGCTGCCCGTCATCTGGCACCAAGGCCTACTGGCCTTTGCGCAGAGGTAC AAGGGGGACATTACCGAGGATCAGCGCGAGGCCCTGCTGGATCTCCTCTTGAGCCACGGGCACTCGGCTATCGGG CCAGAGGTGCGGCGAGAGCTGCTGGTCGGTAGGGGGCGAGGCGTTCCCTTGGAGCCGCAGAAAGTGGCATTTGAT GGCGACGACACTATGGTCATTGACTCGTAA
Gene	>Ophio5\|8514 ATGCCCAAAACCTCGGCTCCCGTTGTCGATCGCCAGGCTCGACGCCACAACCCACTCGAAGATGACATACTCACC AGTGGCCTCCTCCGGAGCAAGCCGAACAAGAAGCGGCCCCGCGGCCAGGATGCGGATGAGGGCTTCGTCGACTCC AGGGCGTCTCGGGACATCCTGCGCATAGGCCGCGAGCTGGTGGACGAGGAGGCCGCTGAGAGAGCGGCTACGACG ACGGAACCTATCGTCGACAGCTTTGGGTACGACTCCCGATTCGACGAAGCAGAAGCCGACGCGGACGCCGCCCAC GCCTACGGAGACGACGACGACTGGGGCGACGAGGAGGAAGCCGTGGAGGAGATCGAGATCGATCCCCAAGACCTC GAGACTTACAGCAAATTCATGCCCGACAAAAATGAGGATGATCTGCTCAAGCATGGCTGGGACCGCCGCCCTACA GGCAACGAGCAGGGCGAGAGCGTCAACTTGGCAGACCTTATCCTGGAGAAGATTGCAGCCTACGAGGCCTCCGAG GCCAGGAAGGAGGCCGGTCTGCCCGCGGAAGAACATCAATTACCACCGCGGGTCATCGAGGCCTACACCAAGTGA GCGGCCCGGGAGCTCGTTGCCGCGCTGTTGCTGACACTTGCCCAGAGTCGGCCAGATCCTGTCCCGGTACAAGTC GGGGCCTCTGCCCAAGCCCTTCAAGATTCTTCCCACCGTCCCCCACTGGGAGGACATACTCGAGATCACCAAGCC AGAGAGCTGGACGCCCAATGCCTGCTACCAGGCCACTCGCATCTTTGTCTCCCACAAGCCCGCCGTCGTCCAACG GTTCCTTGAGATGGTCGTGCTGGAGAAGGTTCGCGAGGACATTTACGAGAACAAGAAGCTCAACGTCCACCTCTT CAATTCACTAAAAAAGGCCCTCTACAAGCCTGCGGCCTTTTTCAAGGGCTTCCTCTTTCCCCTCGTCGGCAGCGG CACCTGCACGCTGAGAGAGGCGCACATCATCTCGGCCGTCCTGGCCAGGATTTCCATCCCCGTCTTGCACTCGGC CGCAGCCCTGAAGGGTCTGTGCGACATTGCCGCCCAAGAAGCCTCTCACGGCACCGAGGGCGGCGGCGCCACCAA CATCTTCATCAAGACACTCCTAGAGAAGAAGTACGCCCTGCCGTATCAGGTCATTGACGCGCTCGTCTTCCACTT CCTGCGCTTCCGAAGCGTCGACCCTGCCGGCGTCAAGGAGGGTGAGCCTTCAACCGAGGGCGACGCCAGGACCAG GCTGCCCGTCATCTGGCACCAAGGCCTACTGGCCTTTGCGCAGAGGTACAAGGGGGACATTACCGAGGATCAGCG CGAGGCCCTGCTGGATCTCCTCTTGAGCCACGGGCACTCGGCTATCGGGCCAGAGGTGCGGCGAGAGCTGCTGGT CGGTAGGGGGCGAGGCGTTCCCTTGGAGCCGCAGAAAGTGGCATTTGATGGCGACGACACTATGGTCATTGACTC GTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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