© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ophio5|8466 |
| Gene name | |
| Location | scaffold_95:5638..7846 |
| Strand | + |
| Gene length (bp) | 2208 |
| Transcript length (bp) | 1830 |
| Coding sequence length (bp) | 1827 |
| Protein length (aa) | 609 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00172 | Zn_clus | Fungal Zn(2)-Cys(6) binuclear cluster domain | 1.0E-07 | 42 | 72 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0006355 | regulation of transcription, DNA-templated | Yes |
| GO:0008270 | zinc ion binding | Yes |
| GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific | Yes |
| GO:0008150 | biological_process | No |
| GO:0051252 | regulation of RNA metabolic process | No |
| GO:0060255 | regulation of macromolecule metabolic process | No |
| GO:0019222 | regulation of metabolic process | No |
| GO:0050794 | regulation of cellular process | No |
| GO:0140110 | transcription regulator activity | No |
| GO:0031323 | regulation of cellular metabolic process | No |
| GO:0065007 | biological regulation | No |
| GO:0046872 | metal ion binding | No |
| GO:0010468 | regulation of gene expression | No |
| GO:0043167 | ion binding | No |
| GO:0043169 | cation binding | No |
| GO:0003674 | molecular_function | No |
| GO:0019219 | regulation of nucleobase-containing compound metabolic process | No |
| GO:0051171 | regulation of nitrogen compound metabolic process | No |
| GO:0005488 | binding | No |
| GO:0080090 | regulation of primary metabolic process | No |
| GO:0009889 | regulation of biosynthetic process | No |
| GO:0050789 | regulation of biological process | No |
| GO:0003700 | DNA-binding transcription factor activity | No |
| GO:1903506 | regulation of nucleic acid-templated transcription | No |
| GO:2001141 | regulation of RNA biosynthetic process | No |
| GO:0046914 | transition metal ion binding | No |
| GO:0010556 | regulation of macromolecule biosynthetic process | No |
| GO:0031326 | regulation of cellular biosynthetic process | No |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Cytoplasm|Nucleus | Nuclear localization signal | 0.4977 | 0.8553 | 0.0705 | 0.0195 | 0.1409 | 0.0063 | 0.0507 | 0.0584 | 0.0547 | 0.0402 |
| Transcription Factor Class (based on PFAM domains) |
|---|
| Fungal Specific TF |
| Orthofinder run ID | 4 |
| Orthogroup | 5835 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophio5|8466 MDRRPSLRTTTRRLMPACSLPAQPVQPAQPVLRRKRQTVSLACERCRKRKAKCNGLMPSCYACTAANLECKYLAP EAGRLLRYRDMQSAYDDMRHASVAAVGSADTVQPFVRANEPMGRWLEALRRSRERRLVPVVSPAASPKVLPVSLW TSVSDDNMMLTGLLTLFWTWAPTASRLVHREMFLAGLCAAAGSTAVTAHFGCSKLLVNAILALSSACFTGPSTSE GPRRLCHRFAHEARRLVENKASSREDLVPLFQGVAILSVYEGIFGYTEGTTASLLSTYYELRAAHQRAQPFIVAP TAEKVQAMCYMATGFDFFDFQLGLIFSSPALACSAPSMSDPEDGTRLLGAEAALCDSLWSPYPLSDQPRLSFSKE HMRAEWELVRHAKEIVPVIESNRTSSVPDFAGTKALYARLLAWHESRMLDFQGQCSLIPAWVCLSLTYHVVALRL LEPFNGISFLDFDGFKPARSLSQSHSESIVSALWRYRTAYDLWHDFWPLHACYAAVSNLLLGHGLAGGSSHKEAL TQGCQLLCDLGTRLPLASRMCQELQLAHKELDLPDVVLRFLRRGAAMTKVSQIANVAMLSDAGGGGVRLEPCVIR FGETIHRIG |
| Coding | >Ophio5|8466 ATGGACCGCCGTCCGTCTTTGAGGACGACGACGAGGCGTCTGATGCCCGCATGCAGCCTCCCGGCGCAGCCTGTC CAGCCCGCTCAACCGGTGCTCAGGCGGAAGCGGCAGACGGTGAGCCTGGCGTGTGAGAGATGCCGCAAGCGCAAG GCCAAATGCAACGGTTTGATGCCCTCCTGCTACGCCTGTACCGCCGCCAACTTGGAGTGCAAATATCTCGCCCCT GAAGCTGGTAGACTGCTCCGATACCGGGACATGCAGTCCGCCTATGATGACATGCGCCATGCCTCTGTCGCAGCC GTCGGCAGCGCCGATACTGTCCAGCCCTTTGTTCGCGCCAACGAGCCCATGGGCCGCTGGCTCGAGGCCCTCCGC CGAAGCAGGGAGCGTCGTCTTGTTCCCGTCGTTTCTCCGGCTGCCTCCCCCAAGGTGCTGCCCGTGTCTCTGTGG ACGAGCGTCAGCGACGACAACATGATGCTCACCGGCCTGCTTACCTTGTTCTGGACCTGGGCGCCTACTGCCAGC AGACTCGTTCATCGCGAAATGTTCCTCGCTGGCCTATGCGCCGCCGCCGGGTCAACCGCCGTGACTGCACATTTC GGTTGCTCCAAGCTCTTGGTCAACGCCATCCTGGCTCTCTCGAGTGCTTGCTTCACGGGACCCAGCACATCCGAG GGCCCACGACGGCTTTGCCATAGGTTTGCCCACGAGGCGAGGCGTCTGGTGGAAAACAAAGCATCCTCCCGCGAG GACTTGGTTCCCCTGTTTCAAGGCGTCGCCATCCTATCCGTCTACGAAGGCATCTTCGGCTATACCGAGGGAACC ACAGCCTCACTTCTCAGCACTTATTACGAGCTCAGGGCGGCACATCAACGCGCCCAGCCATTCATTGTCGCCCCC ACGGCCGAAAAGGTGCAGGCCATGTGCTACATGGCCACGGGCTTTGATTTTTTTGACTTTCAGCTCGGCCTCATC TTCTCTTCTCCTGCCCTCGCCTGCTCCGCCCCTTCGATGAGCGACCCGGAAGACGGTACGCGACTTCTCGGCGCC GAGGCGGCTCTCTGTGACTCGCTCTGGTCTCCGTATCCCCTCTCGGACCAGCCGCGGCTGTCGTTTTCCAAAGAG CACATGCGAGCCGAGTGGGAACTCGTCCGGCACGCCAAGGAGATTGTGCCCGTCATCGAGTCGAATCGCACCAGT TCGGTGCCGGACTTTGCCGGCACAAAGGCCTTGTACGCGCGTCTTCTCGCCTGGCACGAGTCACGAATGCTGGAT TTTCAAGGACAGTGCTCCTTGATACCGGCCTGGGTCTGCCTCAGCCTGACTTACCACGTCGTCGCTCTGAGACTT CTCGAACCCTTCAACGGGATATCCTTCCTCGATTTCGACGGCTTCAAGCCCGCCAGGTCCCTCAGCCAGTCCCAC AGCGAGAGCATCGTCTCGGCCCTCTGGCGCTACAGGACCGCCTACGACTTATGGCACGACTTCTGGCCTCTGCAC GCCTGCTACGCCGCCGTTTCTAACCTGCTGCTGGGCCACGGCCTCGCCGGGGGCTCCTCTCACAAGGAGGCCCTC ACCCAGGGTTGTCAGCTGCTCTGCGACTTGGGCACCAGACTCCCCCTCGCCAGCAGGATGTGTCAGGAGCTGCAG CTGGCGCACAAAGAGCTCGACCTGCCCGACGTGGTCCTCCGCTTTCTCAGACGCGGCGCGGCCATGACCAAGGTC AGCCAGATTGCCAACGTCGCCATGTTGAGCGACGCTGGCGGAGGAGGTGTGCGGCTCGAACCTTGCGTCATTAGG TTTGGAGAGACGATTCATAGGATAGGA |
| Transcript | >Ophio5|8466 ATGGACCGCCGTCCGTCTTTGAGGACGACGACGAGGCGTCTGATGCCCGCATGCAGCCTCCCGGCGCAGCCTGTC CAGCCCGCTCAACCGGTGCTCAGGCGGAAGCGGCAGACGGTGAGCCTGGCGTGTGAGAGATGCCGCAAGCGCAAG GCCAAATGCAACGGTTTGATGCCCTCCTGCTACGCCTGTACCGCCGCCAACTTGGAGTGCAAATATCTCGCCCCT GAAGCTGGTAGACTGCTCCGATACCGGGACATGCAGTCCGCCTATGATGACATGCGCCATGCCTCTGTCGCAGCC GTCGGCAGCGCCGATACTGTCCAGCCCTTTGTTCGCGCCAACGAGCCCATGGGCCGCTGGCTCGAGGCCCTCCGC CGAAGCAGGGAGCGTCGTCTTGTTCCCGTCGTTTCTCCGGCTGCCTCCCCCAAGGTGCTGCCCGTGTCTCTGTGG ACGAGCGTCAGCGACGACAACATGATGCTCACCGGCCTGCTTACCTTGTTCTGGACCTGGGCGCCTACTGCCAGC AGACTCGTTCATCGCGAAATGTTCCTCGCTGGCCTATGCGCCGCCGCCGGGTCAACCGCCGTGACTGCACATTTC GGTTGCTCCAAGCTCTTGGTCAACGCCATCCTGGCTCTCTCGAGTGCTTGCTTCACGGGACCCAGCACATCCGAG GGCCCACGACGGCTTTGCCATAGGTTTGCCCACGAGGCGAGGCGTCTGGTGGAAAACAAAGCATCCTCCCGCGAG GACTTGGTTCCCCTGTTTCAAGGCGTCGCCATCCTATCCGTCTACGAAGGCATCTTCGGCTATACCGAGGGAACC ACAGCCTCACTTCTCAGCACTTATTACGAGCTCAGGGCGGCACATCAACGCGCCCAGCCATTCATTGTCGCCCCC ACGGCCGAAAAGGTGCAGGCCATGTGCTACATGGCCACGGGCTTTGATTTTTTTGACTTTCAGCTCGGCCTCATC TTCTCTTCTCCTGCCCTCGCCTGCTCCGCCCCTTCGATGAGCGACCCGGAAGACGGTACGCGACTTCTCGGCGCC GAGGCGGCTCTCTGTGACTCGCTCTGGTCTCCGTATCCCCTCTCGGACCAGCCGCGGCTGTCGTTTTCCAAAGAG CACATGCGAGCCGAGTGGGAACTCGTCCGGCACGCCAAGGAGATTGTGCCCGTCATCGAGTCGAATCGCACCAGT TCGGTGCCGGACTTTGCCGGCACAAAGGCCTTGTACGCGCGTCTTCTCGCCTGGCACGAGTCACGAATGCTGGAT TTTCAAGGACAGTGCTCCTTGATACCGGCCTGGGTCTGCCTCAGCCTGACTTACCACGTCGTCGCTCTGAGACTT CTCGAACCCTTCAACGGGATATCCTTCCTCGATTTCGACGGCTTCAAGCCCGCCAGGTCCCTCAGCCAGTCCCAC AGCGAGAGCATCGTCTCGGCCCTCTGGCGCTACAGGACCGCCTACGACTTATGGCACGACTTCTGGCCTCTGCAC GCCTGCTACGCCGCCGTTTCTAACCTGCTGCTGGGCCACGGCCTCGCCGGGGGCTCCTCTCACAAGGAGGCCCTC ACCCAGGGTTGTCAGCTGCTCTGCGACTTGGGCACCAGACTCCCCCTCGCCAGCAGGATGTGTCAGGAGCTGCAG CTGGCGCACAAAGAGCTCGACCTGCCCGACGTGGTCCTCCGCTTTCTCAGACGCGGCGCGGCCATGACCAAGGTC AGCCAGATTGCCAACGTCGCCATGTTGAGCGACGCTGGCGGAGGAGGTGTGCGGCTCGAACCTTGCGTCATTAGG TTTGGAGAGACGATTCATAGGATAGGATAG |
| Gene | >Ophio5|8466 ATGGACCGCCGTCCGTCTTTGAGGACGACGACGAGGCGTCTGATGCCCGCATGCAGCCTCCCGGCGCAGCCTGTC CAGCCCGCTCAACCGGTGCTCAGGCGGAAGCGGCAGACGGTGAGCCTGGCGTGTGAGAGTAAGGCTCCAAGCCCT TCATCTCTCTGATTTTACCGTCGTCTAATCTGTTGCAGGATGCCGCAAGCGCAAGGCCAAAGTGAGTTTCAAGTC ATGTCTTGGTTCTCTCTCGTAATCGACGTGAGAGAGAGAGAGACAGAGCGAGGTAAAAGTGAGGGTGAGTGAAAA AGAGACAGCCGTCTAAGAAACTCGTCAGTGCAACGGTTTGATGCCCTCCTGCTACGCCTGTACCGCCGCCAACTT GGAGTGCAAATATCTCGCCCCTGAAGCTGGTAGACTGCTCCGATACCGGGACATGCAGTCCGCCTATGATGACAT GCGCCATGCCTCTGTCGCAGCCGTCGGCAGCGCCGATACTGTCCAGCCCTTTGTTCGCGCCAACGAGCCCATGGG CCGCTGGCTCGAGGCCCTCCGCCGAAGCAGGGAGCGTCGTCTTGTTCCCGTCGTTTCTCCGGCTGCCTCCCCCAA GGTGCTGCCCGTGTCTCTGTGGACGAGCGTCAGCGACGACAACATGATGCTCACCGGCCTGCTTACCTTGTTCTG GACCTGGGCGCCTACTGCCAGCAGACTCGTTCATCGCGAAATGTTCCTCGCTGGCCTATGCGCCGCCGCCGGGTC AACCGCCGTGACTGCACATTTCGGTTGCTCCAAGCTCTTGGTCAACGCCATCCTGGCTCTCTCGAGTGTAAGTCC GGATTCCCCCTTTTCCGTCACCGGCTGCACTAATCCTTTCTTGAGGCTTGCTTCACGGGACCCAGCACATCCGAG GGCCCACGACGGCTTTGCCATAGGTTTGCCCACGAGGCGAGGCGTCTGGTGGAAAACAAAGCATCCTCCCGCGAG GACTTGGTTCCCCTGTTTCAAGGCGTCGCCATCCTATCCGTCTACGAAGGCATCTTCGGCTATACCGAGGGAACC ACAGCCTCACTTCTCAGCACTTATTACGAGCTCAGGGCGGCACATCAACGCGCCCAGCCATTCATTGTCGCCCCC ACGGCCGAAAAGGTGCAGGCCATGTGCTACATGGCCACGGGCTTTGATTTTTTTGACTTGTAAGCAGACCTGTAT CTGAAAGCTGGCTCGTCATTGATCACGAGGTCGCAGTCAGCTCGGCCTCATCTTCTCTTCTCCTGCCCTCGCCTG CTCCGCCCCTTCGATGAGCGACCCGGAAGACGGTACGCGACTTCTCGGCGCCGAGGCGGCTCTCTGTGACTCGCT CTGGTCTCCGTATCCCCTCTCGGACCAGCCGCGGCTGTCGTTTTCCAAAGAGCACATGCGAGCCGAGTGGGAACT CGTCCGGCACGCCAAGGAGATTGTGCCCGTCATCGAGTCGAATCGCACCAGTTCGGTGCCGGACTTTGCCGGCAC AAAGGCCTTGTACGCGCGTCTTCTCGCCTGGCACGAGTCACGAATGCTGGATTTTCAAGGACAGTGCTCCTTGAT ACCGGCCTGGGTCTGCCTCAGGTATGTTGAGCCCCCCACTCCCCCCCCCCCCCAAAAAAAAAAAAAGTCCCGGCG TCTTTATCCCCCCTTTTTTTTGGCACTCTACTCATATCCATCGCCAGCCTGACTTACCACGTCGTCGCTCTGAGA CTTCTCGAACCCTTCAACGGGATATCCTTCCTCGATTTCGACGGCTTCAAGCCCGCCAGGTCCCTCAGCCAGTCC CACAGCGAGAGCATCGTCTCGGCCCTCTGGCGCTACAGGACCGCCTACGACTTATGGCACGACTTCTGGCCTCTG CACGCCTGCTACGCCGCCGTTTCTAACCTGCTGCTGGGCCACGGCCTCGCCGGGGGCTCCTCTCACAAGGAGGCC CTCACCCAGGGTTGTCAGCTGCTCTGCGACTTGGGCACCAGACTCCCCCTCGCCAGCAGGATGTGTCAGGAGCTG CAGCTGGCGCACAAAGAGCTCGACCTGCCCGACGTGGTCCTCCGCTTTCTCAGACGCGGCGCGGCCATGACCAAG GTCAGCCAGATTGCCAACGTCGCCATGTTGAGCGACGCTGGCGGAGGAGGTGTGCGGCTCGAACCTTGCGTCATT AGGTTTGGAGAGACGATTCATAGGATAGGATAG |