Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|8438
Gene name
Locationscaffold_94:24162..25204
Strand-
Gene length (bp)1042
Transcript length (bp)774
Coding sequence length (bp)771
Protein length (aa) 257

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF04889 Cwf_Cwc_15 Cwf15/Cwc15 cell cycle control protein 9.5E-84 1 257

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q5B020|CWC15_EMENI Pre-mRNA-splicing factor cwc15 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=cwc15 PE=3 SV=1 1 257 1.0E-67
sp|O45766|CWC15_CAEEL Protein CWC15 homolog OS=Caenorhabditis elegans GN=T10C6.5 PE=3 SV=1 1 257 5.0E-34
sp|P78794|CWC15_SCHPO Pre-mRNA-splicing factor cwf15 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=cwf15 PE=1 SV=2 1 256 3.0E-31
sp|Q9V3B6|CWC15_DROME Protein CWC15 homolog OS=Drosophila melanogaster GN=c12.1 PE=2 SV=1 1 257 2.0E-26
sp|Q9JHS9|CWC15_MOUSE Spliceosome-associated protein CWC15 homolog OS=Mus musculus GN=Cwc15 PE=1 SV=1 162 257 5.0E-22
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Swissprot ID Swissprot Description Start End E-value
sp|Q5B020|CWC15_EMENI Pre-mRNA-splicing factor cwc15 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=cwc15 PE=3 SV=1 1 257 1.0E-67
sp|O45766|CWC15_CAEEL Protein CWC15 homolog OS=Caenorhabditis elegans GN=T10C6.5 PE=3 SV=1 1 257 5.0E-34
sp|P78794|CWC15_SCHPO Pre-mRNA-splicing factor cwf15 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=cwf15 PE=1 SV=2 1 256 3.0E-31
sp|Q9V3B6|CWC15_DROME Protein CWC15 homolog OS=Drosophila melanogaster GN=c12.1 PE=2 SV=1 1 257 2.0E-26
sp|Q9JHS9|CWC15_MOUSE Spliceosome-associated protein CWC15 homolog OS=Mus musculus GN=Cwc15 PE=1 SV=1 162 257 5.0E-22
sp|Q5RE65|CWC15_PONAB Spliceosome-associated protein CWC15 homolog OS=Pongo abelii GN=CWC15 PE=2 SV=1 162 257 5.0E-22
sp|Q9P013|CWC15_HUMAN Spliceosome-associated protein CWC15 homolog OS=Homo sapiens GN=CWC15 PE=1 SV=2 162 257 5.0E-22
sp|Q5BJP2|CWC15_RAT Spliceosome-associated protein CWC15 homolog OS=Rattus norvegicus GN=Cwc15 PE=1 SV=1 162 257 6.0E-22
sp|Q2KJD3|CWC15_BOVIN Spliceosome-associated protein CWC15 homolog OS=Bos taurus GN=CWC15 PE=2 SV=1 162 257 7.0E-22
sp|Q0VFP5|CWC15_XENTR Protein CWC15 homolog OS=Xenopus tropicalis GN=cwc15 PE=2 SV=1 164 257 2.0E-21
sp|Q6DKE6|CW15B_XENLA Protein CWC15 homolog B OS=Xenopus laevis GN=cwc15-b PE=2 SV=1 1 257 4.0E-19
sp|Q6IQU4|CWC15_DANRE Protein CWC15 homolog OS=Danio rerio GN=cwc15 PE=2 SV=1 162 257 5.0E-19
sp|Q6BP48|CWC15_DEBHA Pre-mRNA-splicing factor CWC15 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) GN=CWC15 PE=3 SV=2 1 257 4.0E-17
sp|Q6C0E6|CWC15_YARLI Pre-mRNA-splicing factor CWC15 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=CWC15 PE=3 SV=1 1 65 3.0E-10
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GO

GO Term Description Terminal node
GO:0005681 spliceosomal complex Yes
GO:0000398 mRNA splicing, via spliceosome Yes
GO:0044237 cellular metabolic process No
GO:0043170 macromolecule metabolic process No
GO:0008150 biological_process No
GO:0006725 cellular aromatic compound metabolic process No
GO:0016071 mRNA metabolic process No
GO:0008380 RNA splicing No
GO:0032991 protein-containing complex No
GO:0044238 primary metabolic process No
GO:0090304 nucleic acid metabolic process No
GO:0046483 heterocycle metabolic process No
GO:1990904 ribonucleoprotein complex No
GO:0006139 nucleobase-containing compound metabolic process No
GO:0000375 RNA splicing, via transesterification reactions No
GO:0008152 metabolic process No
GO:0140513 nuclear protein-containing complex No
GO:0071704 organic substance metabolic process No
GO:0009987 cellular process No
GO:0005575 cellular_component No
GO:0006397 mRNA processing No
GO:0016070 RNA metabolic process No
GO:0006396 RNA processing No
GO:1901360 organic cyclic compound metabolic process No
GO:0006807 nitrogen compound metabolic process No
GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile No
GO:0034641 cellular nitrogen compound metabolic process No

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Nucleus Nuclear localization signal 0.231 0.7846 0.0147 0.012 0.1158 0.0012 0.0506 0.019 0.0459 0.0119

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Orthologs

Orthofinder run ID4
Orthogroup2958
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|6260
Ophiocordyceps australis map64 (Brazil) OphauB2|6559
Ophiocordyceps camponoti-floridani Ophcf2|01928
Ophiocordyceps camponoti-rufipedis Ophun1|3016
Ophiocordyceps kimflemingae Ophio5|8438 (this protein)
Ophiocordyceps subramaniannii Hirsu2|5022

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|8438
MTTAHRPTFDPARGKEALRGPAYHQRLLPAHKQLKYRQAGQGGDADGEAGRRDLAAELLAAEEAARAKRSGNNKK
QFDTDVDIDDDEQSRHEAAGEKLSGGDEGAKRVREESDGDEEAAKRRRVLLETRDVDADEESDEDEADDDDDDDD
DDDDEDDEDEDAELQRELERVRRERQEKKQREDEARAQAEAQERERSIALGNPLLNKQDFSLKRRWDDDVVFKNQ
ARGTEEKGKKKEFVNDLLRSDFHRRFMSKYVR
Coding >Ophio5|8438
ATGACGACCGCTCACAGACCGACCTTTGATCCCGCGCGCGGCAAAGAAGCGCTCCGTGGGCCGGCATACCACCAG
CGACTACTCCCGGCACACAAGCAGTTGAAGTACCGACAAGCCGGCCAGGGCGGTGACGCAGACGGCGAAGCGGGC
CGGCGCGATCTGGCGGCGGAGCTGCTCGCTGCCGAGGAGGCAGCCCGCGCGAAGCGTAGCGGAAACAACAAGAAG
CAGTTTGACACGGACGTCGATATCGACGATGACGAGCAAAGTCGTCATGAGGCGGCCGGCGAGAAATTATCCGGT
GGGGACGAGGGTGCTAAGCGAGTGCGCGAGGAGAGTGACGGGGACGAGGAGGCGGCCAAGCGGCGGAGGGTTTTA
CTCGAGACGAGGGATGTGGATGCCGATGAGGAGAGCGACGAGGATGAGGCTGACGACGACGACGACGACGACGAC
GACGACGACGATGAAGACGATGAAGACGAAGATGCGGAGCTGCAGCGCGAACTAGAGCGCGTCCGCCGGGAACGC
CAAGAGAAGAAACAACGCGAGGACGAAGCGCGCGCCCAAGCCGAAGCCCAAGAGCGCGAACGGTCCATCGCCCTC
GGCAACCCGCTCCTCAACAAGCAGGATTTTTCACTCAAGCGTCGCTGGGACGACGACGTGGTGTTTAAGAATCAG
GCGAGAGGGACGGAGGAGAAGGGGAAGAAGAAGGAGTTTGTTAATGATCTGCTACGATCTGACTTTCATCGACGG
TTTATGAGCAAGTATGTTCGC
Transcript >Ophio5|8438
ATGACGACCGCTCACAGACCGACCTTTGATCCCGCGCGCGGCAAAGAAGCGCTCCGTGGGCCGGCATACCACCAG
CGACTACTCCCGGCACACAAGCAGTTGAAGTACCGACAAGCCGGCCAGGGCGGTGACGCAGACGGCGAAGCGGGC
CGGCGCGATCTGGCGGCGGAGCTGCTCGCTGCCGAGGAGGCAGCCCGCGCGAAGCGTAGCGGAAACAACAAGAAG
CAGTTTGACACGGACGTCGATATCGACGATGACGAGCAAAGTCGTCATGAGGCGGCCGGCGAGAAATTATCCGGT
GGGGACGAGGGTGCTAAGCGAGTGCGCGAGGAGAGTGACGGGGACGAGGAGGCGGCCAAGCGGCGGAGGGTTTTA
CTCGAGACGAGGGATGTGGATGCCGATGAGGAGAGCGACGAGGATGAGGCTGACGACGACGACGACGACGACGAC
GACGACGACGATGAAGACGATGAAGACGAAGATGCGGAGCTGCAGCGCGAACTAGAGCGCGTCCGCCGGGAACGC
CAAGAGAAGAAACAACGCGAGGACGAAGCGCGCGCCCAAGCCGAAGCCCAAGAGCGCGAACGGTCCATCGCCCTC
GGCAACCCGCTCCTCAACAAGCAGGATTTTTCACTCAAGCGTCGCTGGGACGACGACGTGGTGTTTAAGAATCAG
GCGAGAGGGACGGAGGAGAAGGGGAAGAAGAAGGAGTTTGTTAATGATCTGCTACGATCTGACTTTCATCGACGG
TTTATGAGCAAGTATGTTCGCTAG
Gene >Ophio5|8438
ATGACGACCGCTCACAGACCGACCTTTGATCCCGTAAGCGCCGACCTCCTTTCCTTCCGCGGCTTCCAACGTCAG
GTAGCAGGCTAACATTGCCCAAAAGGCGCGCGGCAAAGAAGCGCTCCGTGGGCCGGCATACCACCAGCGACTACT
CCCGGCACACAAGCAGTTGAAGTACCGACAAGCCGGCCAGGGCGGTGACGCAGACGGCGAAGCGGGCCGGCGCGA
TCTGGCGGCGGAGCTGCTCGCTGCCGAGGAGGCAGCCCGCGCGAAGCGTAGCGGAAACAACAAGAAGCAGTTTGA
CACGGACGTCGATATCGACGATGACGAGCAAAGTCGTCATGAGGCGGCCGGCGAGAAATTATCCGGTGGGGACGA
GGGTGCTAAGCGAGTGCGCGAGGAGAGTGACGGGGACGAGGAGGCGGCCAAGCGGCGGAGGGTTTTACTCGAGAC
GAGGGATGTGGATGCCGATGAGGAGAGCGACGAGGATGAGGCTGACGACGACGACGACGACGACGACGACGACGA
CGATGAAGACGATGAAGACGAAGATGCGGAGCTGCAGCGCGAACTAGAGCGCGTCCGCCGGGAACGCCAAGAGAA
GAAACAACGCGAGGTAAGCCCCTTTTTCCACGCGAGAGCAAAAGAAGAAGACCAAAAAAAAAAAGAAACGAAAAA
AAAAAGACGACTAACACGTACGTACGTACGCACGCAGGACGAAGCGCGCGCCCAAGCCGAAGCCCAAGAGCGCGA
ACGGTCCATCGCCCTCGGCAACCCGCTCCTCAACAAGCAGGATTTTTCACTCAAGCGTCGCTGGGACGACGACGT
GGTGTTTAAGAATCAGGCGAGAGGGACGGAGGAGAAGGGGAAGAAGAAGGAGTTTGTTAATGTGCGTTTTATTCT
CCTCTCTCTCTCCCCCCCCCCCCCCCTGAAAAAGAAAATGTGTACGCAAGATATGTGCGAGTGATGTAGGCGCTG
ACTTGGTGGACAGGATCTGCTACGATCTGACTTTCATCGACGGTTTATGAGCAAGTATGTTCGCTAG

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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