© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ophio5|8435 |
| Gene name | |
| Location | scaffold_94:18476..20054 |
| Strand | + |
| Gene length (bp) | 1578 |
| Transcript length (bp) | 1524 |
| Coding sequence length (bp) | 1521 |
| Protein length (aa) | 507 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF01545 | Cation_efflux | Cation efflux family | 4.7E-48 | 153 | 372 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q08970|MMT2_YEAST | Mitochondrial metal transporter 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MMT2 PE=3 SV=2 | 144 | 460 | 1.0E-55 |
| sp|Q03218|MMT1_YEAST | Mitochondrial metal transporter 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MMT1 PE=1 SV=1 | 144 | 462 | 1.0E-48 |
| sp|O59758|YJM3_SCHPO | Uncharacterized metal transporter C1020.03 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC1020.03 PE=3 SV=1 | 104 | 445 | 1.0E-44 |
| sp|Q8L725|MTPC1_ARATH | Metal tolerance protein C1 OS=Arabidopsis thaliana GN=MTPC1 PE=2 SV=1 | 124 | 425 | 5.0E-32 |
| sp|Q10LJ2|MTP2_ORYSJ | Metal tolerance protein 2 OS=Oryza sativa subsp. japonica GN=MTP2 PE=2 SV=1 | 150 | 425 | 9.0E-23 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q08970|MMT2_YEAST | Mitochondrial metal transporter 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MMT2 PE=3 SV=2 | 144 | 460 | 1.0E-55 |
| sp|Q03218|MMT1_YEAST | Mitochondrial metal transporter 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MMT1 PE=1 SV=1 | 144 | 462 | 1.0E-48 |
| sp|O59758|YJM3_SCHPO | Uncharacterized metal transporter C1020.03 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC1020.03 PE=3 SV=1 | 104 | 445 | 1.0E-44 |
| sp|Q8L725|MTPC1_ARATH | Metal tolerance protein C1 OS=Arabidopsis thaliana GN=MTPC1 PE=2 SV=1 | 124 | 425 | 5.0E-32 |
| sp|Q10LJ2|MTP2_ORYSJ | Metal tolerance protein 2 OS=Oryza sativa subsp. japonica GN=MTP2 PE=2 SV=1 | 150 | 425 | 9.0E-23 |
| sp|P46348|YEAB_BACSU | Uncharacterized transporter YeaB OS=Bacillus subtilis (strain 168) GN=yeaB PE=3 SV=2 | 144 | 357 | 3.0E-11 |
| sp|C0SP78|YDFM_BACSU | Uncharacterized transporter YdfM OS=Bacillus subtilis (strain 168) GN=ydfM PE=3 SV=1 | 150 | 444 | 1.0E-10 |
| sp|P9WGF5|Y2025_MYCTU | Probable cation efflux system protein Rv2025c OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) GN=Rv2025c PE=1 SV=1 | 130 | 354 | 1.0E-07 |
| sp|P9WGF4|Y2025_MYCTO | Probable cation efflux system protein MT2084 OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) GN=MT2084 PE=3 SV=1 | 130 | 354 | 1.0E-07 |
| sp|Q57891|Y449_METJA | Uncharacterized transporter MJ0449 OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=MJ0449 PE=3 SV=1 | 171 | 445 | 6.0E-07 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016021 | integral component of membrane | Yes |
| GO:0055085 | transmembrane transport | Yes |
| GO:0006812 | cation transport | Yes |
| GO:0008324 | cation transmembrane transporter activity | Yes |
| GO:0015075 | ion transmembrane transporter activity | No |
| GO:0006810 | transport | No |
| GO:0051179 | localization | No |
| GO:0003674 | molecular_function | No |
| GO:0005575 | cellular_component | No |
| GO:0005215 | transporter activity | No |
| GO:0008150 | biological_process | No |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0022857 | transmembrane transporter activity | No |
| GO:0051234 | establishment of localization | No |
| GO:0009987 | cellular process | No |
| GO:0006811 | ion transport | No |
| Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Mitochondrion | Mitochondrial transit peptide | 0.1125 | 0.1241 | 0.0842 | 0.0833 | 0.7125 | 0.1801 | 0.1583 | 0.0807 | 0.1365 | 0.0974 |
| Orthofinder run ID | 4 |
| Orthogroup | 2219 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophio5|8435 MAPCSPSLAAWSAASRRGHDLVLIQTRRHRSAPPARLTNSENPPLLFLLLPSVISRPLQRAVPAAACRSLRQHQP RRLLLQLQSLDSLPHQPRRYCHHACSLVRPCSARRSLLAAMGSVSHQTRCHGSHHHHHHDNTYLISADKNDSGVR ITRIGLLCNLGMAVAKFVGGWAFNSKSMTADAWHSIADLASDMLTLATVAWSLKPPSDRFPMGFGKIESLGSLGV SGMLLLGGLYMGWESAISLYAHYDPEAAHHILEHVGHGHGHSHSHSAASLGIPSIHAAWLAAGTIMVKEWLYHAT IKIARERKSSVLASNAVHHRVDSLTGIVTLTAILGANVLDNAAWLDPVGGLLISIMVVNAGLMNTKAALLELADQ SIDDEIKAAVRKQTTLALSDSVSGGHDAQLRQVSGTKSGQNYLIDLEMAVPSNWTVDDMARLENELRTKVGGRVR GARRVRVRFVSRDGAIRDKFDDFIPGSVHIQTEPEPKDKTDRDQACGSERDSKPIQH |
| Coding | >Ophio5|8435 ATGGCCCCGTGCTCGCCCAGCCTCGCCGCCTGGAGCGCCGCGTCTCGACGCGGTCATGACTTGGTGCTGATCCAG ACTCGTCGCCACCGATCGGCACCGCCCGCCCGTCTGACCAATTCCGAAAACCCGCCTCTATTGTTTCTGCTGCTG CCGTCCGTCATCTCGCGACCTCTTCAGCGGGCCGTCCCCGCTGCGGCTTGTCGGTCGCTGCGTCAGCATCAGCCT CGTCGACTGCTGCTGCAGCTGCAAAGCCTCGACTCTCTCCCTCACCAGCCTCGCCGCTATTGTCACCACGCCTGC TCCCTCGTTCGACCTTGTTCCGCTCGCCGCTCGCTTCTCGCCGCAATGGGCTCCGTTTCGCATCAGACTCGCTGT CATGGCAGCCATCATCATCACCATCATGACAATACCTACCTCATCTCGGCCGACAAGAATGACTCGGGCGTGCGC ATCACCCGCATTGGTCTTCTTTGCAACCTCGGCATGGCTGTTGCCAAATTCGTCGGCGGCTGGGCCTTCAATTCA AAGTCCATGACGGCCGACGCCTGGCACAGCATCGCCGACCTGGCCTCGGACATGCTGACCCTCGCCACCGTCGCG TGGAGCCTCAAGCCTCCCTCGGACCGATTCCCCATGGGCTTCGGCAAGATTGAGAGTCTGGGCTCTCTCGGTGTC TCCGGCATGCTGCTGCTGGGCGGCCTCTACATGGGCTGGGAGAGTGCCATCAGCCTCTACGCCCATTACGACCCG GAGGCCGCCCATCACATACTCGAACACGTCGGACATGGACACGGACACAGCCACTCGCACAGCGCCGCGAGCCTC GGCATTCCTAGTATCCATGCCGCCTGGCTCGCCGCCGGCACCATCATGGTCAAGGAGTGGCTATACCATGCCACG ATCAAGATTGCGAGGGAGCGTAAGTCGTCCGTCCTCGCCTCCAACGCCGTCCACCACCGTGTCGACAGTCTGACG GGCATCGTCACCCTGACGGCCATTCTGGGCGCCAACGTGCTTGACAATGCCGCCTGGCTGGATCCCGTCGGCGGC CTGCTCATCTCCATCATGGTCGTCAACGCCGGCCTGATGAACACAAAGGCCGCCTTACTCGAGCTCGCCGACCAG AGCATCGACGACGAGATCAAGGCCGCCGTCCGTAAGCAGACGACCTTGGCCCTGTCTGACAGCGTCTCAGGAGGT CACGATGCCCAGCTTCGCCAAGTAAGCGGCACCAAGTCCGGTCAGAACTACCTCATCGACCTGGAGATGGCGGTA CCTAGCAACTGGACCGTCGACGACATGGCGCGTCTCGAGAATGAGCTACGGACAAAGGTGGGGGGGCGTGTCCGT GGGGCGAGACGGGTGCGCGTGCGCTTCGTCTCCCGCGATGGAGCCATCCGCGACAAGTTCGACGACTTCATCCCC GGCTCCGTCCACATTCAGACCGAGCCGGAGCCGAAGGACAAGACGGACAGGGACCAGGCTTGCGGCAGCGAGCGG GATTCAAAACCCATTCAACAC |
| Transcript | >Ophio5|8435 ATGGCCCCGTGCTCGCCCAGCCTCGCCGCCTGGAGCGCCGCGTCTCGACGCGGTCATGACTTGGTGCTGATCCAG ACTCGTCGCCACCGATCGGCACCGCCCGCCCGTCTGACCAATTCCGAAAACCCGCCTCTATTGTTTCTGCTGCTG CCGTCCGTCATCTCGCGACCTCTTCAGCGGGCCGTCCCCGCTGCGGCTTGTCGGTCGCTGCGTCAGCATCAGCCT CGTCGACTGCTGCTGCAGCTGCAAAGCCTCGACTCTCTCCCTCACCAGCCTCGCCGCTATTGTCACCACGCCTGC TCCCTCGTTCGACCTTGTTCCGCTCGCCGCTCGCTTCTCGCCGCAATGGGCTCCGTTTCGCATCAGACTCGCTGT CATGGCAGCCATCATCATCACCATCATGACAATACCTACCTCATCTCGGCCGACAAGAATGACTCGGGCGTGCGC ATCACCCGCATTGGTCTTCTTTGCAACCTCGGCATGGCTGTTGCCAAATTCGTCGGCGGCTGGGCCTTCAATTCA AAGTCCATGACGGCCGACGCCTGGCACAGCATCGCCGACCTGGCCTCGGACATGCTGACCCTCGCCACCGTCGCG TGGAGCCTCAAGCCTCCCTCGGACCGATTCCCCATGGGCTTCGGCAAGATTGAGAGTCTGGGCTCTCTCGGTGTC TCCGGCATGCTGCTGCTGGGCGGCCTCTACATGGGCTGGGAGAGTGCCATCAGCCTCTACGCCCATTACGACCCG GAGGCCGCCCATCACATACTCGAACACGTCGGACATGGACACGGACACAGCCACTCGCACAGCGCCGCGAGCCTC GGCATTCCTAGTATCCATGCCGCCTGGCTCGCCGCCGGCACCATCATGGTCAAGGAGTGGCTATACCATGCCACG ATCAAGATTGCGAGGGAGCGTAAGTCGTCCGTCCTCGCCTCCAACGCCGTCCACCACCGTGTCGACAGTCTGACG GGCATCGTCACCCTGACGGCCATTCTGGGCGCCAACGTGCTTGACAATGCCGCCTGGCTGGATCCCGTCGGCGGC CTGCTCATCTCCATCATGGTCGTCAACGCCGGCCTGATGAACACAAAGGCCGCCTTACTCGAGCTCGCCGACCAG AGCATCGACGACGAGATCAAGGCCGCCGTCCGTAAGCAGACGACCTTGGCCCTGTCTGACAGCGTCTCAGGAGGT CACGATGCCCAGCTTCGCCAAGTAAGCGGCACCAAGTCCGGTCAGAACTACCTCATCGACCTGGAGATGGCGGTA CCTAGCAACTGGACCGTCGACGACATGGCGCGTCTCGAGAATGAGCTACGGACAAAGGTGGGGGGGCGTGTCCGT GGGGCGAGACGGGTGCGCGTGCGCTTCGTCTCCCGCGATGGAGCCATCCGCGACAAGTTCGACGACTTCATCCCC GGCTCCGTCCACATTCAGACCGAGCCGGAGCCGAAGGACAAGACGGACAGGGACCAGGCTTGCGGCAGCGAGCGG GATTCAAAACCCATTCAACACTAG |
| Gene | >Ophio5|8435 ATGGCCCCGTGCTCGCCCAGCCTCGCCGCCTGGAGCGCCGCGTCTCGACGCGGTCATGACTTGGTGCTGATCCAG ACTCGTCGCCACCGATCGGCACCGCCCGCCCGTCTGACCAATTCCGAAAACCCGCCTCTATTGTTTCTGCTGCTG CCGTCCGTCATCTCGCGACCTCTTCAGCGGGCCGTCCCCGCTGCGGCTTGTCGGTCGCTGCGTCAGCATCAGCCT CGTCGACTGCTGCTGCAGCTGCAAAGCCTCGACTCTCTCCCTCACCAGCCTCGCCGCTATTGTCACCACGCCTGC TCCCTCGTTCGACCTTGTTCCGCTCGCCGCTCGCTTCTCGCCGCAATGGGCTCCGTTTCGCATCAGACTCGCTGT CATGGCAGCCATCATCATCACCATCATGACAATACCTACCTCATCTCGGCCGACAAGAATGACTCGGGCGTGCGC ATCACCCGCATTGGTCTTCTTTGCAACCTCGGCATGGCTGTTGCCAAATTCGTCGGCGGCTGGGCCTTCAATTCA AAGTCCATGACGGCCGACGCCTGGCACAGCATCGCCGACCTGGCCTCGGACATGCTGACCCTCGCCACCGTCGCG TGGAGCCTCAAGCCTCCCTCGGACCGATTCCCCATGGGCTTCGGCAAGATTGAGAGTCTGGGCTCTCTCGGTGTC TCCGGCATGCTGCTGCTGGGCGGCCTCTACATGGGCTGGGAGAGTGCCATCAGCCTCTACGCCCATTACGACCCG GAGGCCGCCCATCACATACTCGAACACGTCGGACATGGACACGGACACAGCCACTCGCACAGCGCCGCGAGCCTC GGCATTCCTAGTATCCATGCCGCCTGGCTCGCCGCCGGCACCATCATGGTCAAGGAGTGGCTATACCATGCCAGT TCGTCTCTCCTCCTCCCGCCCCTTGCCCGCCGCATGCGCTGATATCTCCCAGCGATCAAGATTGCGAGGGAGCGT AAGTCGTCCGTCCTCGCCTCCAACGCCGTCCACCACCGTGTCGACAGTCTGACGGGCATCGTCACCCTGACGGCC ATTCTGGGCGCCAACGTGCTTGACAATGCCGCCTGGCTGGATCCCGTCGGCGGCCTGCTCATCTCCATCATGGTC GTCAACGCCGGCCTGATGAACACAAAGGCCGCCTTACTCGAGCTCGCCGACCAGAGCATCGACGACGAGATCAAG GCCGCCGTCCGTAAGCAGACGACCTTGGCCCTGTCTGACAGCGTCTCAGGAGGTCACGATGCCCAGCTTCGCCAA GTAAGCGGCACCAAGTCCGGTCAGAACTACCTCATCGACCTGGAGATGGCGGTACCTAGCAACTGGACCGTCGAC GACATGGCGCGTCTCGAGAATGAGCTACGGACAAAGGTGGGGGGGCGTGTCCGTGGGGCGAGACGGGTGCGCGTG CGCTTCGTCTCCCGCGATGGAGCCATCCGCGACAAGTTCGACGACTTCATCCCCGGCTCCGTCCACATTCAGACC GAGCCGGAGCCGAAGGACAAGACGGACAGGGACCAGGCTTGCGGCAGCGAGCGGGATTCAAAACCCATTCAACAC TAG |