Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|8392
Gene name
Locationscaffold_925:2973..5355
Strand+
Gene length (bp)2382
Transcript length (bp)2118
Coding sequence length (bp)2115
Protein length (aa) 705

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00172 Zn_clus Fungal Zn(2)-Cys(6) binuclear cluster domain 9.7E-06 2 31
PF00172 Zn_clus Fungal Zn(2)-Cys(6) binuclear cluster domain 1.5E-06 49 81
PF04082 Fungal_trans Fungal specific transcription factor domain 1.8E-10 161 351

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|Q1MTM9|YFN1_SCHPO Uncharacterized transcriptional regulatory protein C1327.01c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1327.01c PE=1 SV=2 171 471 2.0E-29
sp|O59746|YN2B_SCHPO Uncharacterized transcriptional regulatory protein C530.11c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC530.11c PE=1 SV=1 147 577 4.0E-23
sp|Q9HDX1|YKN4_SCHPO Uncharacterized transcriptional regulatory protein PB1A11.04c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAPB1A11.04c PE=3 SV=1 49 489 4.0E-17

GO

GO Term Description Terminal node
GO:0006351 transcription, DNA-templated Yes
GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific Yes
GO:0006355 regulation of transcription, DNA-templated Yes
GO:0008270 zinc ion binding Yes
GO:0003677 DNA binding Yes
GO:0003676 nucleic acid binding No
GO:0019219 regulation of nucleobase-containing compound metabolic process No
GO:0003674 molecular_function No
GO:0044237 cellular metabolic process No
GO:0043169 cation binding No
GO:0043167 ion binding No
GO:0008152 metabolic process No
GO:0006139 nucleobase-containing compound metabolic process No
GO:1901576 organic substance biosynthetic process No
GO:0010468 regulation of gene expression No
GO:0046872 metal ion binding No
GO:0046483 heterocycle metabolic process No
GO:0051171 regulation of nitrogen compound metabolic process No
GO:0065007 biological regulation No
GO:0090304 nucleic acid metabolic process No
GO:0044238 primary metabolic process No
GO:0031323 regulation of cellular metabolic process No
GO:0140110 transcription regulator activity No
GO:0050794 regulation of cellular process No
GO:0019222 regulation of metabolic process No
GO:0018130 heterocycle biosynthetic process No
GO:0060255 regulation of macromolecule metabolic process No
GO:0006725 cellular aromatic compound metabolic process No
GO:0008150 biological_process No
GO:1901360 organic cyclic compound metabolic process No
GO:0097159 organic cyclic compound binding No
GO:0009058 biosynthetic process No
GO:0044249 cellular biosynthetic process No
GO:0034641 cellular nitrogen compound metabolic process No
GO:0051252 regulation of RNA metabolic process No
GO:0031326 regulation of cellular biosynthetic process No
GO:0006807 nitrogen compound metabolic process No
GO:1901362 organic cyclic compound biosynthetic process No
GO:0010556 regulation of macromolecule biosynthetic process No
GO:0046914 transition metal ion binding No
GO:2001141 regulation of RNA biosynthetic process No
GO:1903506 regulation of nucleic acid-templated transcription No
GO:0003700 DNA-binding transcription factor activity No
GO:0050789 regulation of biological process No
GO:0019438 aromatic compound biosynthetic process No
GO:0034654 nucleobase-containing compound biosynthetic process No
GO:0016070 RNA metabolic process No
GO:0097659 nucleic acid-templated transcription No
GO:0009889 regulation of biosynthetic process No
GO:0009059 macromolecule biosynthetic process No
GO:0080090 regulation of primary metabolic process No
GO:1901363 heterocyclic compound binding No
GO:0044271 cellular nitrogen compound biosynthetic process No
GO:0032774 RNA biosynthetic process No
GO:0009987 cellular process No
GO:0043170 macromolecule metabolic process No
GO:0005488 binding No
GO:0071704 organic substance metabolic process No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 18 0.45

Transmembrane Domains

(None)

Transcription Factor Class

Transcription Factor Class
(based on PFAM domains)
Fungal Specific TF

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|8392
MGCRVCRARKVKCDGRPDGCRNCERLQLDCDDGCRGGGNDSLRRMRTYRSCQNCRLSKTKCSGSRPRCTRCVAKD
MDCLYDGEASPRWASSLGRRDEDASLPVADGPESPVVPVPESESPAAAPDPRRGAAPEPDDKVENQLSWLLSPEL
PTGRNVRRVVEQYFVNVHPLRCFAFVHKPSFMHQLDKGLGSDDESALLHIVCAHGARFLVLGHCLDGHVATPALV
RSAGHQWAKRAEFLMLANFGRISMPRLMVAILLHDYYLGAGEYGQALMLSGLAVRMAYALKINQEYNADVLCSEP
EPEPGAPSVASRESRRRLMWACYVLDAGAGSGADLLRESDIKIQLPCNERNFGLRIPAVTETLAVGHVLQFLAPA
VVPRRPAANMGIMAYYIRLVALWKRIVRCAGLGLGHGQPDSALAALDADLLLWRRELPDFVEYSTETIYARLDSN
QLGALVLIHCTYHHNHLELYRVAMPDLFKLASLPAEQRQALQAAQAGCYHHARRISDIVTDAAEHGVRFLSDSQL
PFFLYHSSRVMLYYVARLLDPARPGAEAKMREAVEAVESNSRVLRLMAILFPMAQSLSATTDRWLSKVQQTVGRD
ELVLLPPLSPPRPGAGDESESRPAGWSTVNPNAGGWDGTSPGPPSGPRRASCSLEHERPVAALCEALDLDDLLSW
DLYGISTEMGEGVCNDEMDDCVSQSWTGAI
Coding >Ophio5|8392
ATGGGCTGTCGCGTCTGTCGAGCAAGAAAGGTCAAGTGCGACGGCCGGCCCGACGGCTGCCGCAATTGCGAGCGC
CTTCAGCTCGATTGCGATGACGGCTGTCGAGGTGGAGGCAACGACTCGCTGCGCAGGATGCGAACCTATCGCTCG
TGCCAGAACTGTCGGCTCAGCAAGACCAAATGCAGCGGTAGTCGTCCGCGATGTACTCGCTGCGTGGCAAAGGAC
ATGGACTGCCTATACGACGGTGAGGCGTCTCCGAGATGGGCCAGCAGCCTCGGCAGGCGGGACGAAGACGCGTCT
CTACCGGTTGCCGACGGCCCGGAGTCGCCCGTTGTGCCGGTGCCGGAGTCGGAGTCGCCCGCTGCTGCCCCGGAC
CCTCGGCGTGGGGCGGCGCCGGAGCCTGACGACAAGGTCGAGAATCAGCTCTCATGGCTGCTTTCACCCGAGCTC
CCGACGGGCCGCAACGTCCGACGCGTGGTTGAGCAATACTTTGTCAACGTCCATCCTTTGCGCTGCTTTGCCTTT
GTTCACAAGCCGTCGTTTATGCACCAGCTCGACAAGGGCCTCGGCTCCGACGACGAGTCTGCTCTGCTACACATT
GTGTGCGCCCACGGGGCGAGATTCCTCGTCCTCGGCCACTGTCTCGATGGCCACGTCGCGACGCCCGCACTGGTG
CGCTCGGCCGGCCACCAATGGGCCAAGCGTGCCGAGTTCCTGATGTTGGCCAACTTTGGGCGAATCTCGATGCCG
CGACTGATGGTGGCCATCTTGCTCCACGACTATTACCTGGGCGCGGGCGAGTACGGCCAGGCGCTGATGCTCAGC
GGGCTGGCGGTGCGGATGGCGTACGCGCTCAAGATCAACCAAGAATACAACGCCGACGTGCTGTGCTCGGAGCCG
GAGCCGGAGCCCGGGGCGCCGTCGGTGGCCTCGCGCGAGAGCCGGCGCCGGCTCATGTGGGCGTGTTATGTGCTC
GACGCCGGGGCCGGAAGCGGAGCCGACCTGCTGCGGGAGAGCGACATCAAGATCCAGCTGCCGTGCAACGAGCGC
AACTTTGGGCTGCGCATCCCGGCCGTGACGGAGACGCTGGCTGTCGGCCACGTTCTGCAGTTTCTGGCGCCGGCC
GTTGTGCCGCGCCGGCCGGCGGCCAACATGGGCATCATGGCCTACTATATCCGTCTGGTGGCGCTGTGGAAGAGG
ATCGTCCGATGCGCCGGCCTCGGCCTCGGACACGGTCAGCCGGACTCGGCCCTGGCCGCGCTGGATGCCGACCTG
CTGCTCTGGAGACGCGAGCTGCCGGACTTTGTCGAGTATTCGACCGAGACCATCTACGCCCGTCTCGACTCGAAC
CAGTTGGGCGCCCTGGTGCTGATACACTGCACCTATCACCACAACCACCTCGAGCTCTACCGGGTCGCCATGCCC
GACCTGTTCAAGCTGGCCTCGTTGCCGGCCGAGCAGCGGCAGGCCCTGCAGGCGGCCCAGGCTGGCTGCTATCAC
CACGCCCGCCGCATATCCGACATCGTCACCGACGCGGCCGAGCACGGGGTGCGCTTCCTGTCCGACAGCCAGCTG
CCCTTCTTCCTCTATCACAGCAGCCGCGTCATGCTCTACTACGTCGCCCGTCTGCTGGACCCGGCCCGACCCGGT
GCCGAGGCCAAGATGAGGGAGGCGGTCGAGGCGGTCGAGAGCAACAGCCGCGTGCTGCGTCTCATGGCCATCCTG
TTCCCCATGGCCCAGTCTCTGTCGGCCACCACCGACCGCTGGCTGTCCAAGGTGCAGCAGACTGTCGGCCGGGAC
GAGCTGGTCCTTCTTCCGCCGCTTTCGCCGCCGAGGCCGGGAGCCGGCGACGAGTCCGAGTCGCGGCCGGCCGGA
TGGAGCACCGTCAACCCCAACGCCGGCGGCTGGGACGGGACCAGCCCGGGGCCGCCGTCCGGACCGCGTCGGGCC
TCGTGCAGCCTCGAGCACGAGCGGCCGGTGGCGGCGCTGTGCGAGGCGCTGGACCTGGACGACTTGCTGAGCTGG
GACCTGTACGGCATCAGCACGGAGATGGGAGAGGGCGTGTGCAACGACGAGATGGACGATTGTGTGTCGCAGTCG
TGGACGGGCGCCATC
Transcript >Ophio5|8392
ATGGGCTGTCGCGTCTGTCGAGCAAGAAAGGTCAAGTGCGACGGCCGGCCCGACGGCTGCCGCAATTGCGAGCGC
CTTCAGCTCGATTGCGATGACGGCTGTCGAGGTGGAGGCAACGACTCGCTGCGCAGGATGCGAACCTATCGCTCG
TGCCAGAACTGTCGGCTCAGCAAGACCAAATGCAGCGGTAGTCGTCCGCGATGTACTCGCTGCGTGGCAAAGGAC
ATGGACTGCCTATACGACGGTGAGGCGTCTCCGAGATGGGCCAGCAGCCTCGGCAGGCGGGACGAAGACGCGTCT
CTACCGGTTGCCGACGGCCCGGAGTCGCCCGTTGTGCCGGTGCCGGAGTCGGAGTCGCCCGCTGCTGCCCCGGAC
CCTCGGCGTGGGGCGGCGCCGGAGCCTGACGACAAGGTCGAGAATCAGCTCTCATGGCTGCTTTCACCCGAGCTC
CCGACGGGCCGCAACGTCCGACGCGTGGTTGAGCAATACTTTGTCAACGTCCATCCTTTGCGCTGCTTTGCCTTT
GTTCACAAGCCGTCGTTTATGCACCAGCTCGACAAGGGCCTCGGCTCCGACGACGAGTCTGCTCTGCTACACATT
GTGTGCGCCCACGGGGCGAGATTCCTCGTCCTCGGCCACTGTCTCGATGGCCACGTCGCGACGCCCGCACTGGTG
CGCTCGGCCGGCCACCAATGGGCCAAGCGTGCCGAGTTCCTGATGTTGGCCAACTTTGGGCGAATCTCGATGCCG
CGACTGATGGTGGCCATCTTGCTCCACGACTATTACCTGGGCGCGGGCGAGTACGGCCAGGCGCTGATGCTCAGC
GGGCTGGCGGTGCGGATGGCGTACGCGCTCAAGATCAACCAAGAATACAACGCCGACGTGCTGTGCTCGGAGCCG
GAGCCGGAGCCCGGGGCGCCGTCGGTGGCCTCGCGCGAGAGCCGGCGCCGGCTCATGTGGGCGTGTTATGTGCTC
GACGCCGGGGCCGGAAGCGGAGCCGACCTGCTGCGGGAGAGCGACATCAAGATCCAGCTGCCGTGCAACGAGCGC
AACTTTGGGCTGCGCATCCCGGCCGTGACGGAGACGCTGGCTGTCGGCCACGTTCTGCAGTTTCTGGCGCCGGCC
GTTGTGCCGCGCCGGCCGGCGGCCAACATGGGCATCATGGCCTACTATATCCGTCTGGTGGCGCTGTGGAAGAGG
ATCGTCCGATGCGCCGGCCTCGGCCTCGGACACGGTCAGCCGGACTCGGCCCTGGCCGCGCTGGATGCCGACCTG
CTGCTCTGGAGACGCGAGCTGCCGGACTTTGTCGAGTATTCGACCGAGACCATCTACGCCCGTCTCGACTCGAAC
CAGTTGGGCGCCCTGGTGCTGATACACTGCACCTATCACCACAACCACCTCGAGCTCTACCGGGTCGCCATGCCC
GACCTGTTCAAGCTGGCCTCGTTGCCGGCCGAGCAGCGGCAGGCCCTGCAGGCGGCCCAGGCTGGCTGCTATCAC
CACGCCCGCCGCATATCCGACATCGTCACCGACGCGGCCGAGCACGGGGTGCGCTTCCTGTCCGACAGCCAGCTG
CCCTTCTTCCTCTATCACAGCAGCCGCGTCATGCTCTACTACGTCGCCCGTCTGCTGGACCCGGCCCGACCCGGT
GCCGAGGCCAAGATGAGGGAGGCGGTCGAGGCGGTCGAGAGCAACAGCCGCGTGCTGCGTCTCATGGCCATCCTG
TTCCCCATGGCCCAGTCTCTGTCGGCCACCACCGACCGCTGGCTGTCCAAGGTGCAGCAGACTGTCGGCCGGGAC
GAGCTGGTCCTTCTTCCGCCGCTTTCGCCGCCGAGGCCGGGAGCCGGCGACGAGTCCGAGTCGCGGCCGGCCGGA
TGGAGCACCGTCAACCCCAACGCCGGCGGCTGGGACGGGACCAGCCCGGGGCCGCCGTCCGGACCGCGTCGGGCC
TCGTGCAGCCTCGAGCACGAGCGGCCGGTGGCGGCGCTGTGCGAGGCGCTGGACCTGGACGACTTGCTGAGCTGG
GACCTGTACGGCATCAGCACGGAGATGGGAGAGGGCGTGTGCAACGACGAGATGGACGATTGTGTGTCGCAGTCG
TGGACGGGCGCCATCTAG
Gene >Ophio5|8392
ATGGGCTGTCGCGTCTGTCGAGCAAGAAAGGCGAGCTTTACCATGCATGGGCTGACGATGGCTTCATTTCTTTTT
TTCCTTCACCTTTACTGACGCCGGCGACAGGTCAAGTGCGACGGCCGGCCCGACGGCTGCCGCAATTGCGAGCGC
CTTCAGCTCGATTGCGATGACGGCTGTCGAGGTGGAGGCAACGACTCGCTGCGCAGGATGCGAACCTATCGCTCG
TGCCAGAACTGTCGGCTCAGCAAGACCAAATGCAGCGGTAGTCGTCCGCGATGTACTCGCTGCGTGGCAAAGGAC
ATGGACTGCCTATACGACGGTGAGGCGTCTCCGAGATGGGCCAGCAGCCTCGGCAGGCGGGACGAAGACGCGTCT
CTACCGGTTGCCGACGGCCCGGAGTCGCCCGTTGTGCCGGTGCCGGAGTCGGAGTCGCCCGCTGCTGCCCCGGAC
CCTCGGCGTGGGGCGGCGCCGGAGCCTGACGACAAGGTCGAGAATCAGCTCTCATGGTGGTGACGCCCTCGCCCC
CCTCTCTCTGGCCGGCATCAGCTGACCGTTTTCTCCCTGACCTGGCTCTTCAGGCTGCTTTCACCCGAGCTCCCG
ACGGGCCGCAACGTCCGACGCGTGGTTGAGCAATACTTTGTCAACGTCCATCCTTTGCGCTGCTTTGCCTTTGTT
CACAAGCCGTCGTTTATGCACCAGCTCGACAAGGGCCTCGGCTCCGACGACGAGTCTGCTCTGCTACACATTGTG
TGCGCCCACGGGGCGAGGTGCGATTCCATCATGTTTAGTAGACTGTAGCCAAACTCACACCGTCTTTAGATTCCT
CGTCCTCGGCCACTGTCTCGATGGCCACGTCGCGACGCCCGCACTGGTGCGCTCGGCCGGCCACCAATGGGCCAA
GCGTGCCGAGTTCCTGATGTTGGCCAACTTTGGGCGAATCTCGATGCCGCGACTGATGGTGGCCATCTTGCTCCA
CGACTATTACCTGGGCGCGGGCGAGTACGGCCAGGCGCTGATGCTCAGCGGGCTGGCGGTGCGGATGGCGTACGC
GCTCAAGATCAACCAAGAATACAACGCCGACGTGCTGTGCTCGGAGCCGGAGCCGGAGCCCGGGGCGCCGTCGGT
GGCCTCGCGCGAGAGCCGGCGCCGGCTCATGTGGGCGTGTTATGTGCTCGACGCCGGGGCCGGAAGCGGAGCCGA
CCTGCTGCGGGAGAGCGACATCAAGATCCAGCTGCCGTGCAACGAGCGCAACTTTGGGCTGCGCATCCCGGCCGT
GACGGAGACGCTGGCTGTCGGCCACGTTCTGCAGTTTCTGGCGCCGGCCGTTGTGCCGCGCCGGCCGGCGGCCAA
CATGGGCATCATGGCCTACTATATCCGTCTGGTGGCGCTGTGGAAGAGGATCGTCCGATGCGCCGGCCTCGGCCT
CGGACACGGTCAGCCGGACTCGGCCCTGGCCGCGCTGGATGCCGACCTGCTGCTCTGGAGACGCGAGCTGCCGGA
CTTTGTCGAGTATTCGACCGAGACCATCTACGCCCGTCTCGACTCGAACCAGTTGGGCGCCCTGGTGCTGATACA
CTGCACCTATCACCACAACCACCTCGAGCTCTACCGGGTCGCCATGCCCGACCTGTTCAAGCTGGCCTCGTTGCC
GGCCGAGCAGCGGCAGGCCCTGCAGGCGGCCCAGGCTGGCTGCTATCACCACGCCCGCCGCATATCCGACATCGT
CACCGACGCGGCCGAGCACGGGGTGCGCTTCCTGTCCGACAGCCAGCTGCCCTTCTTCCTCTATCACAGCAGCCG
CGTCATGCTCTACTACGTCGCCCGTCTGCTGGACCCGGCCCGACCCGGTGCCGAGGCCAAGATGAGGGAGGCGGT
CGAGGCGGTCGAGAGCAACAGCCGCGTGCTGCGTCTCATGGCCATCCTGTTCCCCATGGCCCAGTCTCTGGTCCG
TTGCTTTTCCTCCGGGTGCGTGCGATGAGTGACGCTGACGGAGGAGGGCCGGTGGCACAGTCGGCCACCACCGAC
CGCTGGCTGTCCAAGGTGCAGCAGACTGTCGGCCGGGACGAGCTGGTCCTTCTTCCGCCGCTTTCGCCGCCGAGG
CCGGGAGCCGGCGACGAGTCCGAGTCGCGGCCGGCCGGATGGAGCACCGTCAACCCCAACGCCGGCGGCTGGGAC
GGGACCAGCCCGGGGCCGCCGTCCGGACCGCGTCGGGCCTCGTGCAGCCTCGAGCACGAGCGGCCGGTGGCGGCG
CTGTGCGAGGCGCTGGACCTGGACGACTTGCTGAGCTGGGACCTGTACGGCATCAGCACGGAGATGGGAGAGGGC
GTGTGCAACGACGAGATGGACGATTGTGTGTCGCAGTCGTGGACGGGCGCCATCTAG

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