Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|8364
Gene name
Locationscaffold_92:15608..16558
Strand-
Gene length (bp)950
Transcript length (bp)894
Coding sequence length (bp)891
Protein length (aa) 297

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF13519 VWA_2 von Willebrand factor type A domain 2.3E-26 6 116
PF00092 VWA von Willebrand factor type A domain 1.2E-11 6 156
PF04056 Ssl1 Ssl1-like 1.4E-08 9 144

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|P55034|PSMD4_ARATH 26S proteasome non-ATPase regulatory subunit 4 homolog OS=Arabidopsis thaliana GN=RPN10 PE=1 SV=1 1 241 5.0E-74
sp|O94444|RPN10_SCHPO 26S proteasome regulatory subunit rpn10 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=rpn10 PE=1 SV=1 1 250 1.0E-69
sp|P38886|RPN10_YEAST 26S proteasome regulatory subunit RPN10 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RPN10 PE=1 SV=3 1 234 1.0E-66
sp|P55036|PSMD4_HUMAN 26S proteasome non-ATPase regulatory subunit 4 OS=Homo sapiens GN=PSMD4 PE=1 SV=1 1 234 2.0E-64
sp|O35226|PSMD4_MOUSE 26S proteasome non-ATPase regulatory subunit 4 OS=Mus musculus GN=Psmd4 PE=1 SV=1 1 234 2.0E-64
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Swissprot ID Swissprot Description Start End E-value
sp|P55034|PSMD4_ARATH 26S proteasome non-ATPase regulatory subunit 4 homolog OS=Arabidopsis thaliana GN=RPN10 PE=1 SV=1 1 241 5.0E-74
sp|O94444|RPN10_SCHPO 26S proteasome regulatory subunit rpn10 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=rpn10 PE=1 SV=1 1 250 1.0E-69
sp|P38886|RPN10_YEAST 26S proteasome regulatory subunit RPN10 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RPN10 PE=1 SV=3 1 234 1.0E-66
sp|P55036|PSMD4_HUMAN 26S proteasome non-ATPase regulatory subunit 4 OS=Homo sapiens GN=PSMD4 PE=1 SV=1 1 234 2.0E-64
sp|O35226|PSMD4_MOUSE 26S proteasome non-ATPase regulatory subunit 4 OS=Mus musculus GN=Psmd4 PE=1 SV=1 1 234 2.0E-64
sp|Q58DA0|PSMD4_BOVIN 26S proteasome non-ATPase regulatory subunit 4 OS=Bos taurus GN=PSMD4 PE=2 SV=1 1 234 2.0E-64
sp|Q553E0|PSMD4_DICDI 26S proteasome non-ATPase regulatory subunit 4 OS=Dictyostelium discoideum GN=psmD4 PE=2 SV=1 1 234 7.0E-59
sp|O17453|PSMD4_SCHMA 26S proteasome non-ATPase regulatory subunit 4 OS=Schistosoma mansoni PE=2 SV=2 1 242 1.0E-55
sp|P55035|PSMD4_DROME 26S proteasome non-ATPase regulatory subunit 4 OS=Drosophila melanogaster GN=Rpn10 PE=1 SV=2 1 246 5.0E-55
sp|A2A3N6|PIPSL_HUMAN Putative PIP5K1A and PSMD4-like protein OS=Homo sapiens GN=PIPSL PE=5 SV=1 3 234 7.0E-51
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GO

(None)

Deeploc

[Help with interpreting the results of Deeploc 2.0]
Localizations Signals Cytoplasm Nucleus Extracellular Cell membrane Mitochondrion Plastid Endoplasmic reticulum Lysosome vacuole Golgi apparatus Peroxisome
Cytoplasm|Nucleus Nuclear localization signal 0.6929 0.7693 0.0138 0.0819 0.1229 0.0103 0.3351 0.0456 0.2711 0.0042

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Orthologs

Orthofinder run ID4
Orthogroup1927
Change Orthofinder run
Species Protein ID
Ophiocordyceps australis 1348a (Ghana) OphauG2|6118
Ophiocordyceps australis map64 (Brazil) OphauB2|2646
Ophiocordyceps camponoti-floridani Ophcf2|07321
Ophiocordyceps camponoti-rufipedis Ophun1|4437
Ophiocordyceps kimflemingae Ophio5|8364 (this protein)
Ophiocordyceps subramaniannii Hirsu2|2057

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|8364
MVLEAVMVVVDNSESSRNGDYQPTRFDAQVDAVNVLFQSITQGNPESSVGLMSMGGKGPEILVTLTTEQGKILEG
LHRTKKNIGGSSHLKTGIQVATLALKHRQNRLQRQRIIVLVCSPVEEEEKELTQLAKKMKKGNISVDFILFGDLE
DDTTQKKLQAFNTAVKGNEGSHMVVIPPSGKLLSDQLVATPILLGENASGSGGSGGMGGGEEEFEFGFDPAMEPE
LALALRMSMEEEKARQEKRAREEEEVAKKASLEGVKEEDEAGQASGSGSGSGTQNKQQDSKKDDDGDKMDTS
Coding >Ophio5|8364
ATGGTGCTCGAAGCCGTCATGGTTGTCGTGGACAACAGCGAGAGCAGCAGAAACGGAGACTACCAGCCGACCCGC
TTCGACGCCCAGGTAGACGCCGTCAATGTGCTCTTCCAGAGCATCACCCAAGGCAATCCGGAGTCGTCGGTCGGC
CTCATGAGCATGGGCGGCAAGGGCCCCGAGATCCTCGTCACCCTGACGACGGAGCAGGGCAAGATACTTGAAGGC
CTGCATCGGACAAAGAAGAATATTGGTGGATCGTCGCATCTTAAGACGGGCATTCAAGTCGCTACGCTCGCCCTC
AAACACCGACAGAACCGATTGCAGAGGCAGCGAATAATAGTCTTGGTCTGCTCCCCAGTAGAGGAGGAGGAAAAG
GAGCTCACCCAGCTGGCGAAAAAGATGAAAAAGGGTAACATTTCCGTCGACTTCATCCTCTTCGGCGACCTCGAG
GACGACACCACGCAGAAGAAGCTGCAGGCGTTCAACACCGCCGTCAAGGGCAACGAGGGCTCGCACATGGTCGTC
ATCCCGCCCAGCGGCAAGCTCCTCAGCGACCAGCTTGTCGCCACGCCCATCCTCCTGGGCGAGAACGCATCCGGC
TCCGGCGGCTCCGGCGGCATGGGCGGCGGCGAGGAGGAGTTCGAATTCGGCTTCGACCCGGCCATGGAGCCCGAG
CTGGCCCTCGCCCTGCGTATGAGCATGGAGGAGGAAAAGGCCAGACAGGAGAAGCGGGCGCGAGAAGAAGAAGAG
GTGGCCAAAAAGGCCTCTTTGGAGGGCGTCAAGGAGGAGGACGAAGCCGGGCAGGCGAGCGGCAGTGGCAGCGGC
AGCGGGACACAAAATAAGCAACAGGATAGCAAAAAGGACGATGACGGCGACAAGATGGACACGTCG
Transcript >Ophio5|8364
ATGGTGCTCGAAGCCGTCATGGTTGTCGTGGACAACAGCGAGAGCAGCAGAAACGGAGACTACCAGCCGACCCGC
TTCGACGCCCAGGTAGACGCCGTCAATGTGCTCTTCCAGAGCATCACCCAAGGCAATCCGGAGTCGTCGGTCGGC
CTCATGAGCATGGGCGGCAAGGGCCCCGAGATCCTCGTCACCCTGACGACGGAGCAGGGCAAGATACTTGAAGGC
CTGCATCGGACAAAGAAGAATATTGGTGGATCGTCGCATCTTAAGACGGGCATTCAAGTCGCTACGCTCGCCCTC
AAACACCGACAGAACCGATTGCAGAGGCAGCGAATAATAGTCTTGGTCTGCTCCCCAGTAGAGGAGGAGGAAAAG
GAGCTCACCCAGCTGGCGAAAAAGATGAAAAAGGGTAACATTTCCGTCGACTTCATCCTCTTCGGCGACCTCGAG
GACGACACCACGCAGAAGAAGCTGCAGGCGTTCAACACCGCCGTCAAGGGCAACGAGGGCTCGCACATGGTCGTC
ATCCCGCCCAGCGGCAAGCTCCTCAGCGACCAGCTTGTCGCCACGCCCATCCTCCTGGGCGAGAACGCATCCGGC
TCCGGCGGCTCCGGCGGCATGGGCGGCGGCGAGGAGGAGTTCGAATTCGGCTTCGACCCGGCCATGGAGCCCGAG
CTGGCCCTCGCCCTGCGTATGAGCATGGAGGAGGAAAAGGCCAGACAGGAGAAGCGGGCGCGAGAAGAAGAAGAG
GTGGCCAAAAAGGCCTCTTTGGAGGGCGTCAAGGAGGAGGACGAAGCCGGGCAGGCGAGCGGCAGTGGCAGCGGC
AGCGGGACACAAAATAAGCAACAGGATAGCAAAAAGGACGATGACGGCGACAAGATGGACACGTCGTAG
Gene >Ophio5|8364
ATGGTGCTCGAAGCCGTCATGGTTGTCGTGGACAACAGCGAGAGCAGCAGAAACGGAGACTACCAGCCGACCCGC
TTCGACGCCCAGGTAGACGCCGTCAATGTGCTCTTCCAGAGCATCACCCAAGGCAATCCGGAGTCGTCGGTCGGC
CTCATGAGCATGGGCGGCAAGGGCCCCGAGATCCTCGTCACCCTGACGACGGAGCAGGGCAAGATACTTGAAGGC
CTGCATCGGACAAAGAAGAATATTGGTGGATCGTCGCATCTTAAGACGGGCATTCAAGTCGCTACGGTCGGTCCT
CTTCGTCGCCCTATCTTTTGTCCCATTTGACTGACGGGGCCCGGCAGCTCGCCCTCAAACACCGACAGAACCGAT
TGCAGAGGCAGCGAATAATAGTCTTGGTCTGCTCCCCAGTAGAGGAGGAGGAAAAGGAGCTCACCCAGCTGGCGA
AAAAGATGAAAAAGGGTAACATTTCCGTCGACTTCATCCTCTTCGGCGACCTCGAGGACGACACCACGCAGAAGA
AGCTGCAGGCGTTCAACACCGCCGTCAAGGGCAACGAGGGCTCGCACATGGTCGTCATCCCGCCCAGCGGCAAGC
TCCTCAGCGACCAGCTTGTCGCCACGCCCATCCTCCTGGGCGAGAACGCATCCGGCTCCGGCGGCTCCGGCGGCA
TGGGCGGCGGCGAGGAGGAGTTCGAATTCGGCTTCGACCCGGCCATGGAGCCCGAGCTGGCCCTCGCCCTGCGTA
TGAGCATGGAGGAGGAAAAGGCCAGACAGGAGAAGCGGGCGCGAGAAGAAGAAGAGGTGGCCAAAAAGGCCTCTT
TGGAGGGCGTCAAGGAGGAGGACGAAGCCGGGCAGGCGAGCGGCAGTGGCAGCGGCAGCGGGACACAAAATAAGC
AACAGGATAGCAAAAAGGACGATGACGGCGACAAGATGGACACGTCGTAG

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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