Fungal Genomics

at Utrecht University

General Properties

Protein ID	Ophio5\|8348
Gene name
Location	scaffold_913:3065..5436
Strand	+
Gene length (bp)	2371
Transcript length (bp)	1977
Coding sequence length (bp)	1974
Protein length (aa)	658

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF00383	dCMP_cyt_deam_1	Cytidine and deoxycytidylate deaminase zinc-binding region	9.2E-08	451	602

Swissprot hits

Swissprot ID	Swissprot Description	Start	End	E-value
sp\|Q9P7N4\|TAD3_SCHPO	tRNA-specific adenosine deaminase subunit tad3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=tad3 PE=3 SV=1	370	658	5.0E-20
sp\|Q9URQ3\|TAD3_YEAST	tRNA-specific adenosine deaminase subunit TAD3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TAD3 PE=1 SV=1	402	641	8.0E-13
sp\|Q96EY9\|ADAT3_HUMAN	Probable inactive tRNA-specific adenosine deaminase-like protein 3 OS=Homo sapiens GN=ADAT3 PE=1 SV=1	392	601	2.0E-06

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 24	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Expression values

Label	Description	Expression (RPKM)	Confidence interval (low)	Confidence interval (high)
SC16a	Pure fungal culture	41.38	22.73	60.03
CcL	In ants, during behavior modification	24.34	11.46	37.21
CcD	In ants, recently dead	24.44	12.66	36.21

Differential expression

Label1	Label2	Q-value	Significant difference
SC16a	CcL	0.022392	yes
SC16a	CcD	0.013694	yes
CcL	CcD	0.989363	no

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Ophio5\|8348 MATTPRASVSSAALQISSDAASGKSGGEKQRPVRCHTDSSHLPFRPMATVSPQLDVHLDVHLDVCIRPIASPLLF LTSSSPALHSRPGPRGKPTSSILLQAGSFSWSRLVWRKTGLSQLPRSLTPFLPPPPQSRKRPFQQSASPPPSPAP YSPSPDPYLSLFPISNIVTSCPASAPDAVSSFAVPSIRPGADDDAWLGRRPLSPRPLSSGPSTKACFFCDDMAAS APLDPDRSAPCQMEHDGNKVYSDSVGAEANGKPARPCKILPNPLVDDLKELHVGRGVLIPLKTTQEVRQDHVITQ AYMTRVPTKSANDVIMAVRTLRPEGSANPLPHLRTCAKPNDLPAHIKTQLMNDTAAGRQIHTSKSTWIYVIVGET KDFSKEEVLRVLSGLAGVGQDVFVASIPIPLLPPTSQVQAAMWSSQFWPTVYRKNNPLGPHPSVVGRGTDDIKDD ASVWMALAHQVARDAKRAGIGEAMGAVIVQRSERGAELVGLAGDARRHQASCRGFKNNPMTHCVLRAISMVAQKL VRHERREGGLSVTRPNLAYDAFQDRPLLDVERACLAQDHPNKDGYLCHGLELYVTHEPCVACSMGILHSRMGKVA FCKHMPRTGGLSSDDRPDGGGRGLGLFWRRELNWSLLAWEWERDGVAGLPPVDPTTHV
Coding	>Ophio5\|8348 ATGGCTACGACGCCGCGCGCTTCCGTCTCGTCTGCTGCCCTGCAGATCTCGTCTGACGCGGCTTCGGGAAAATCG GGCGGGGAAAAACAGCGGCCGGTTCGGTGCCACACCGATTCGTCCCATCTCCCCTTTCGTCCCATGGCTACCGTC TCTCCACAGCTTGACGTTCACCTTGACGTCCACCTTGACGTCTGCATTCGTCCAATTGCATCACCCTTGCTCTTT CTGACCTCGTCTTCGCCAGCGCTTCATAGTAGGCCAGGGCCAAGGGGGAAACCGACAAGCTCGATCCTCCTCCAA GCCGGCTCATTCTCCTGGTCAAGACTGGTTTGGAGAAAGACGGGGCTCTCGCAACTTCCCCGTTCATTGACGCCT TTTCTCCCCCCCCCCCCCCAAAGCAGGAAGAGACCTTTTCAGCAATCAGCTTCCCCTCCCCCCTCTCCAGCCCCC TACTCTCCCTCGCCTGATCCCTACCTATCCTTGTTCCCAATTTCAAACATCGTCACGTCGTGTCCAGCCTCGGCT CCAGACGCCGTTTCCAGCTTCGCCGTCCCTAGCATCAGGCCCGGAGCCGACGACGACGCCTGGCTCGGCCGACGG CCGCTTTCCCCTCGACCTCTTTCATCTGGCCCGTCGACCAAGGCGTGCTTCTTCTGCGACGACATGGCGGCCTCC GCGCCGTTGGATCCGGATCGGTCCGCACCCTGCCAAATGGAGCATGATGGCAACAAGGTCTACAGCGACAGCGTC GGCGCCGAGGCCAACGGCAAGCCCGCGCGGCCATGCAAAATCTTGCCCAATCCTCTGGTCGATGACCTGAAGGAG TTGCATGTCGGGCGCGGAGTTCTGATTCCTCTCAAGACGACGCAGGAGGTGCGCCAGGACCATGTCATTACTCAG GCATACATGACGAGGGTGCCGACCAAGTCGGCTAACGACGTGATCATGGCGGTACGCACCTTGCGACCTGAGGGC AGCGCTAACCCCCTGCCCCATCTCCGGACTTGCGCCAAGCCCAACGACTTGCCGGCACACATCAAGACGCAGTTG ATGAACGACACGGCGGCCGGGCGGCAGATCCACACGTCCAAGTCGACGTGGATCTACGTCATCGTTGGCGAGACC AAGGATTTCAGCAAGGAGGAGGTGTTGCGGGTGCTGTCGGGGCTCGCGGGCGTGGGGCAGGACGTGTTTGTGGCG AGCATCCCGATCCCGCTGCTGCCGCCGACGTCGCAGGTGCAGGCGGCCATGTGGTCTTCACAGTTCTGGCCGACA GTGTACCGCAAGAACAACCCTCTGGGACCGCACCCGAGCGTGGTGGGGCGCGGAACCGACGACATCAAGGACGAC GCGTCGGTATGGATGGCGCTGGCACACCAGGTGGCGCGCGATGCCAAGAGGGCGGGCATCGGCGAGGCCATGGGG GCCGTCATTGTCCAGCGCAGCGAACGGGGCGCCGAGCTTGTCGGTCTGGCCGGGGACGCGCGACGACACCAGGCG TCGTGTCGAGGCTTCAAGAACAACCCCATGACGCACTGCGTGCTACGGGCCATCAGTATGGTGGCGCAGAAGCTG GTACGGCACGAGCGGCGGGAGGGCGGGCTGTCGGTGACGAGGCCCAACCTGGCGTACGACGCGTTCCAGGACCGA CCGCTGCTGGACGTGGAGCGAGCGTGCCTGGCGCAGGACCACCCCAACAAGGACGGCTACCTCTGCCACGGGCTT GAGCTGTACGTGACGCACGAGCCGTGCGTGGCTTGCTCGATGGGCATCCTGCACTCACGGATGGGCAAGGTGGCG TTTTGCAAGCACATGCCCCGGACGGGGGGGCTGAGCTCCGACGACCGGCCGGACGGAGGCGGACGAGGGCTGGGC CTATTTTGGCGACGAGAGCTCAACTGGAGCTTGCTGGCGTGGGAGTGGGAGCGCGATGGAGTTGCCGGCCTGCCG CCCGTGGACCCGACCACTCATGTT
Transcript	>Ophio5\|8348 ATGGCTACGACGCCGCGCGCTTCCGTCTCGTCTGCTGCCCTGCAGATCTCGTCTGACGCGGCTTCGGGAAAATCG GGCGGGGAAAAACAGCGGCCGGTTCGGTGCCACACCGATTCGTCCCATCTCCCCTTTCGTCCCATGGCTACCGTC TCTCCACAGCTTGACGTTCACCTTGACGTCCACCTTGACGTCTGCATTCGTCCAATTGCATCACCCTTGCTCTTT CTGACCTCGTCTTCGCCAGCGCTTCATAGTAGGCCAGGGCCAAGGGGGAAACCGACAAGCTCGATCCTCCTCCAA GCCGGCTCATTCTCCTGGTCAAGACTGGTTTGGAGAAAGACGGGGCTCTCGCAACTTCCCCGTTCATTGACGCCT TTTCTCCCCCCCCCCCCCCAAAGCAGGAAGAGACCTTTTCAGCAATCAGCTTCCCCTCCCCCCTCTCCAGCCCCC TACTCTCCCTCGCCTGATCCCTACCTATCCTTGTTCCCAATTTCAAACATCGTCACGTCGTGTCCAGCCTCGGCT CCAGACGCCGTTTCCAGCTTCGCCGTCCCTAGCATCAGGCCCGGAGCCGACGACGACGCCTGGCTCGGCCGACGG CCGCTTTCCCCTCGACCTCTTTCATCTGGCCCGTCGACCAAGGCGTGCTTCTTCTGCGACGACATGGCGGCCTCC GCGCCGTTGGATCCGGATCGGTCCGCACCCTGCCAAATGGAGCATGATGGCAACAAGGTCTACAGCGACAGCGTC GGCGCCGAGGCCAACGGCAAGCCCGCGCGGCCATGCAAAATCTTGCCCAATCCTCTGGTCGATGACCTGAAGGAG TTGCATGTCGGGCGCGGAGTTCTGATTCCTCTCAAGACGACGCAGGAGGTGCGCCAGGACCATGTCATTACTCAG GCATACATGACGAGGGTGCCGACCAAGTCGGCTAACGACGTGATCATGGCGGTACGCACCTTGCGACCTGAGGGC AGCGCTAACCCCCTGCCCCATCTCCGGACTTGCGCCAAGCCCAACGACTTGCCGGCACACATCAAGACGCAGTTG ATGAACGACACGGCGGCCGGGCGGCAGATCCACACGTCCAAGTCGACGTGGATCTACGTCATCGTTGGCGAGACC AAGGATTTCAGCAAGGAGGAGGTGTTGCGGGTGCTGTCGGGGCTCGCGGGCGTGGGGCAGGACGTGTTTGTGGCG AGCATCCCGATCCCGCTGCTGCCGCCGACGTCGCAGGTGCAGGCGGCCATGTGGTCTTCACAGTTCTGGCCGACA GTGTACCGCAAGAACAACCCTCTGGGACCGCACCCGAGCGTGGTGGGGCGCGGAACCGACGACATCAAGGACGAC GCGTCGGTATGGATGGCGCTGGCACACCAGGTGGCGCGCGATGCCAAGAGGGCGGGCATCGGCGAGGCCATGGGG GCCGTCATTGTCCAGCGCAGCGAACGGGGCGCCGAGCTTGTCGGTCTGGCCGGGGACGCGCGACGACACCAGGCG TCGTGTCGAGGCTTCAAGAACAACCCCATGACGCACTGCGTGCTACGGGCCATCAGTATGGTGGCGCAGAAGCTG GTACGGCACGAGCGGCGGGAGGGCGGGCTGTCGGTGACGAGGCCCAACCTGGCGTACGACGCGTTCCAGGACCGA CCGCTGCTGGACGTGGAGCGAGCGTGCCTGGCGCAGGACCACCCCAACAAGGACGGCTACCTCTGCCACGGGCTT GAGCTGTACGTGACGCACGAGCCGTGCGTGGCTTGCTCGATGGGCATCCTGCACTCACGGATGGGCAAGGTGGCG TTTTGCAAGCACATGCCCCGGACGGGGGGGCTGAGCTCCGACGACCGGCCGGACGGAGGCGGACGAGGGCTGGGC CTATTTTGGCGACGAGAGCTCAACTGGAGCTTGCTGGCGTGGGAGTGGGAGCGCGATGGAGTTGCCGGCCTGCCG CCCGTGGACCCGACCACTCATGTTTAG
Gene	>Ophio5\|8348 ATGGCTACGACGCCGCGCGCTTCCGTCTCGTCTGCTGCCCTGCAGATCTCGTCTGACGCGGCTTCGGGAAAATCG GGCGGGGAAAAACAGCGGCCGGTTCGGTGCCACACCGATTCGTCCCATCTCCCCTTTCGTCCCATGGCGTAAGTC CCATGTCGCCTTGCCAGCTGTCGGCACTTTCTCGCGGCCCTGCTGAAGCAACCAAACCCCCCCCCCCCCCCTTTC AGTACCGTCTCTCCACAGCTTGACGTTCACCTTGACGTCCACCTTGACGTCTGCATTCGTCCAATTGCATCACCC TTGCTCTTTCTGACCTCGTCTTCGCCAGCGCTTCATAGTAGGCCAGTAGGTAGCCCAATTCTTCATGACCTCTTT TGACGCTCGAGACGGCAACTCATGCAGCCAATTTAGGGGCCAAGGGGGAAGTAAAAAAAAAGGGATTTTTTTTAT TTTTATTTTAAAAAAAGAGGAAACGCCCAAGTCCCGCGGAGCCAAAAACCACTTACTTTCAACCCACTTCCCAGA CCGACAAGCTCGATCCTCCTCCAAGCCGGCTCATTCTCCTGGTCAAGACTGGTTTGGTGAGGAGCCCTTTCCCCT GGCCGAAAGAAAGCTTCCAACTCCCTTTGATTCTTGCTTTCGTTGCTTGACGCGCATTTGCATTAGGAGAAAGAC GGGGCTCTCGCAACTTCCCCGTTCATTGACGCCTTTTCTCCCCCCCCCCCCCCAAAGCAGGAAGAGACCTTTTCA GCAATCAGCTTCCCCTCCCCCCTCTCCAGCCCCCTACTCTCCCTCGCCTGATCCCTACCTATCCTTGTTCCCAAT TTCAAACATCGTCACGTCGTGTCCAGCCTCGGCTCCAGACGCCGTTTCCAGCTTCGCCGTCCCTAGCATCAGGCC CGGAGCCGACGACGACGCCTGGCTCGGCCGACGGCCGCTTTCCCCTCGACCTCTTTCATCTGGCCCGTCGACCAA GGCGTGCTTCTTCTGCGACGACATGGCGGCCTCCGCGCCGTTGGATCCGGATCGGTCCGCACCCTGCCAAATGGA GCATGATGGCAACAAGGTCTACAGCGACAGCGTCGGCGCCGAGGCCAACGGCAAGCCCGCGCGGCCATGCAAAAT CTTGCCCAATCCTCTGGTCGATGACCTGAAGGAGTTGCATGTCGGGCGCGGAGTTCTGATTCCTCTCAAGACGAC GCAGGAGGTGCGCCAGGACCATGTCATTACTCAGGCATACATGACGAGGGTGCCGACCAAGTCGGCTAACGACGT GATCATGTACGTGTCCAGCTCGTGCGGATCAAGAAGCCGCTCCCCGCTGACTGCAGGGCGTGGCAGGGCGGTACG CACCTTGCGACCTGAGGGCAGCGCTAACCCCCTGCCCCATCTCCGGACTTGCGCCAAGCCCAACGACTTGCCGGC ACACATCAAGACGCAGTTGATGAACGACACGGCGGCCGGGCGGCAGATCCACACGTCCAAGTCGACGTGGATCTA CGTCATCGTTGGCGAGACCAAGGATTTCAGCAAGGAGGAGGTGTTGCGGGTGCTGTCGGGGCTCGCGGGCGTGGG GCAGGACGTGTTTGTGGCGAGCATCCCGATCCCGCTGCTGCCGCCGACGTCGCAGGTGCAGGCGGCCATGTGGTC TTCACAGTTCTGGCCGACAGTGTACCGCAAGAACAACCCTCTGGGACCGCACCCGAGCGTGGTGGGGCGCGGAAC CGACGACATCAAGGACGACGCGTCGGTATGGATGGCGCTGGCACACCAGGTGGCGCGCGATGCCAAGAGGGCGGG CATCGGCGAGGCCATGGGGGCCGTCATTGTCCAGCGCAGCGAACGGGGCGCCGAGCTTGTCGGTCTGGCCGGGGA CGCGCGACGACACCAGGCGTCGTGTCGAGGCTTCAAGAACAACCCCATGACGCACTGCGTGCTACGGGCCATCAG TATGGTGGCGCAGAAGCTGGTACGGCACGAGCGGCGGGAGGGCGGGCTGTCGGTGACGAGGCCCAACCTGGCGTA CGACGCGTTCCAGGACCGACCGCTGCTGGACGTGGAGCGAGCGTGCCTGGCGCAGGACCACCCCAACAAGGACGG CTACCTCTGCCACGGGCTTGAGCTGTACGTGACGCACGAGCCGTGCGTGGCTTGCTCGATGGGCATCCTGCACTC ACGGATGGGCAAGGTGGCGTTTTGCAAGCACATGCCCCGGACGGGGGGGCTGAGCTCCGACGACCGGCCGGACGG AGGCGGACGAGGGCTGGGCCTATTTTGGCGACGAGAGCTCAACTGGAGCTTGCTGGCGTGGGAGTGGGAGCGCGA TGGAGTTGCCGGCCTGCCGCCCGTGGACCCGACCACTCATGTTTAG

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