Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|8335
Gene name
Locationscaffold_91:28631..29294
Strand-
Gene length (bp)663
Transcript length (bp)573
Coding sequence length (bp)570
Protein length (aa) 190

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF05730 CFEM CFEM domain 2.6E-10 23 89

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 18 0.45

Transmembrane Domains

Domain # Start End Length
1 167 189 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|8335
MKFSAAVVLSIVAAVSAVSDEGIKDLPKCAQHCVKDAVLGHTNCEDGALDCICKNVDTLVPAAADCVLESCGKKT
AINEVLTKAVKICNNNTHKLAARQASVECLPVSVAPVAPVSSVAQAPAPVETVEPVAVPPPAPVEPVAVATTTSA
NVFTTTVGLPRPTSTVVTAGAGAVAPAGGIAALAVAAYLL
Coding >Ophio5|8335
ATGAAGTTCTCCGCCGCCGTCGTCCTCAGCATCGTCGCTGCCGTCTCCGCCGTCTCGGACGAGGGCATCAAGGAT
CTCCCCAAGTGCGCGCAGCACTGCGTCAAGGACGCCGTCCTCGGCCACACCAACTGCGAAGACGGTGCGCTCGAC
TGCATCTGCAAGAACGTCGATACGCTCGTCCCTGCCGCGGCCGACTGTGTCCTCGAGAGCTGCGGCAAGAAGACG
GCTATCAACGAGGTCCTCACCAAGGCCGTCAAGATCTGCAACAACAACACGCACAAGCTCGCCGCCCGCCAGGCC
AGCGTCGAGTGCTTGCCGGTGTCGGTGGCACCGGTGGCACCGGTGTCGTCGGTGGCGCAGGCGCCGGCGCCGGTG
GAGACGGTGGAGCCGGTGGCGGTGCCGCCCCCAGCGCCGGTTGAGCCGGTGGCGGTGGCGACGACGACGTCGGCC
AACGTCTTCACCACCACCGTCGGCCTCCCCAGGCCCACGTCGACCGTCGTCACCGCCGGCGCCGGCGCCGTCGCT
CCCGCCGGTGGCATCGCTGCCCTGGCCGTTGCTGCCTATCTTTTG
Transcript >Ophio5|8335
ATGAAGTTCTCCGCCGCCGTCGTCCTCAGCATCGTCGCTGCCGTCTCCGCCGTCTCGGACGAGGGCATCAAGGAT
CTCCCCAAGTGCGCGCAGCACTGCGTCAAGGACGCCGTCCTCGGCCACACCAACTGCGAAGACGGTGCGCTCGAC
TGCATCTGCAAGAACGTCGATACGCTCGTCCCTGCCGCGGCCGACTGTGTCCTCGAGAGCTGCGGCAAGAAGACG
GCTATCAACGAGGTCCTCACCAAGGCCGTCAAGATCTGCAACAACAACACGCACAAGCTCGCCGCCCGCCAGGCC
AGCGTCGAGTGCTTGCCGGTGTCGGTGGCACCGGTGGCACCGGTGTCGTCGGTGGCGCAGGCGCCGGCGCCGGTG
GAGACGGTGGAGCCGGTGGCGGTGCCGCCCCCAGCGCCGGTTGAGCCGGTGGCGGTGGCGACGACGACGTCGGCC
AACGTCTTCACCACCACCGTCGGCCTCCCCAGGCCCACGTCGACCGTCGTCACCGCCGGCGCCGGCGCCGTCGCT
CCCGCCGGTGGCATCGCTGCCCTGGCCGTTGCTGCCTATCTTTTGTAA
Gene >Ophio5|8335
ATGAAGTTCTCCGCCGCCGTCGTCCTCAGCATCGTCGCTGCCGTCTCCGCCGTCTCGGACGAGGGCATCAAGGAT
CTCCCCAAGTGCGCGCAGCACTGCGTCAAGGACGCCGTCCTCGGCCACACCAACTGCGAAGACGGTGCGCTCGAC
TGCATCTGCAAGAACGTCGATACGCTCGTCCCTGCCGCGGCCGACTGTGTCCTCGAGAGCTGCGGCAAGAAGACG
GCTATCAGTACGTGATTCTTCTTTCCACCGCCCTCGGATTCACTCCTCTCAACCCCTGACAAATAACGTACCACT
AACGCACCGTGATCCAAAACAGACGAGGTCCTCACCAAGGCCGTCAAGATCTGCAACAACAACACGCACAAGCTC
GCCGCCCGCCAGGCCAGCGTCGAGTGCTTGCCGGTGTCGGTGGCACCGGTGGCACCGGTGTCGTCGGTGGCGCAG
GCGCCGGCGCCGGTGGAGACGGTGGAGCCGGTGGCGGTGCCGCCCCCAGCGCCGGTTGAGCCGGTGGCGGTGGCG
ACGACGACGTCGGCCAACGTCTTCACCACCACCGTCGGCCTCCCCAGGCCCACGTCGACCGTCGTCACCGCCGGC
GCCGGCGCCGTCGCTCCCGCCGGTGGCATCGCTGCCCTGGCCGTTGCTGCCTATCTTTTGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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