Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|8326
Gene name
Locationscaffold_909:2523..3192
Strand+
Gene length (bp)669
Transcript length (bp)603
Coding sequence length (bp)600
Protein length (aa) 200

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

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SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 20 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|8326
MKLTAALSTLLLGSIMAAADDVQSKPFNLVIQSADKGLNGQMFAACHTGAAIESLCVSGRFGSQFFFNTTEGAQS
PMPGFEPSGAITYNLPLSGAPDHVSEPMDFWTDPSTNVALPLFQPGYSRQQVTFDKQSQLAILSYLDDTHTPPTG
TKVKALKNWYVCQTYYTGYQYRTLSWVLGSGSVKPQNPSCVKVEVQRKFL
Coding >Ophio5|8326
ATGAAGCTCACCGCCGCCCTTTCGACTCTGCTTCTCGGCAGCATCATGGCCGCCGCCGACGATGTCCAGTCCAAG
CCGTTCAATCTGGTCATCCAGTCAGCCGACAAGGGCCTCAACGGACAAATGTTTGCCGCTTGCCATACCGGTGCC
GCCATTGAGTCGCTCTGCGTCAGCGGCAGATTCGGCAGCCAATTCTTCTTCAACACGACTGAGGGTGCCCAATCT
CCCATGCCGGGCTTCGAGCCCTCCGGGGCCATTACATATAATCTGCCGCTCTCAGGAGCGCCAGATCATGTATCT
GAGCCCATGGACTTCTGGACCGACCCGTCTACCAACGTTGCTTTGCCCCTGTTCCAGCCCGGCTACTCGAGACAG
CAGGTGACGTTCGACAAGCAGAGCCAGCTGGCAATCCTCAGCTACCTGGACGACACGCACACCCCCCCTACCGGT
ACCAAGGTCAAGGCGCTGAAGAACTGGTACGTTTGCCAGACTTACTATACCGGCTACCAGTACCGAACCCTGAGC
TGGGTCCTGGGCAGCGGCAGCGTCAAGCCCCAGAACCCCAGTTGCGTCAAGGTCGAGGTCCAGCGCAAGTTTCTC
Transcript >Ophio5|8326
ATGAAGCTCACCGCCGCCCTTTCGACTCTGCTTCTCGGCAGCATCATGGCCGCCGCCGACGATGTCCAGTCCAAG
CCGTTCAATCTGGTCATCCAGTCAGCCGACAAGGGCCTCAACGGACAAATGTTTGCCGCTTGCCATACCGGTGCC
GCCATTGAGTCGCTCTGCGTCAGCGGCAGATTCGGCAGCCAATTCTTCTTCAACACGACTGAGGGTGCCCAATCT
CCCATGCCGGGCTTCGAGCCCTCCGGGGCCATTACATATAATCTGCCGCTCTCAGGAGCGCCAGATCATGTATCT
GAGCCCATGGACTTCTGGACCGACCCGTCTACCAACGTTGCTTTGCCCCTGTTCCAGCCCGGCTACTCGAGACAG
CAGGTGACGTTCGACAAGCAGAGCCAGCTGGCAATCCTCAGCTACCTGGACGACACGCACACCCCCCCTACCGGT
ACCAAGGTCAAGGCGCTGAAGAACTGGTACGTTTGCCAGACTTACTATACCGGCTACCAGTACCGAACCCTGAGC
TGGGTCCTGGGCAGCGGCAGCGTCAAGCCCCAGAACCCCAGTTGCGTCAAGGTCGAGGTCCAGCGCAAGTTTCTC
TGA
Gene >Ophio5|8326
ATGAAGCTCACCGCCGCCCTTTCGACTCTGCTTCTCGGCAGCATCATGGCCGCCGCCGACGATGTCCAGTCCAAG
CCGTTCAATCTGGTCATCCAGTCAGCCGACAAGGGCCTCAACGGACAAATGTTTGCCGCTTGCCATACCGGTGCC
GCCATTGAGTCGCTCTGCGTCAGCGGCAGATTCGGCAGCCAATTCTTCTTCAACACGACTGAGGGTGCCCAATCT
CCCATGCCGGGCTTCGAGCCCTCCGGGGCCATTACATATAATCTGCCGCTCTCAGGAGGTATATGCCATGCTCAT
GTTCCCTTGCTTTGCGCCGGAAATAGCTAATACCCATACCCTATTGCAGCGCCAGATCATGTATCTGAGCCCATG
GACTTCTGGACCGACCCGTCTACCAACGTTGCTTTGCCCCTGTTCCAGCCCGGCTACTCGAGACAGCAGGTGACG
TTCGACAAGCAGAGCCAGCTGGCAATCCTCAGCTACCTGGACGACACGCACACCCCCCCTACCGGTACCAAGGTC
AAGGCGCTGAAGAACTGGTACGTTTGCCAGACTTACTATACCGGCTACCAGTACCGAACCCTGAGCTGGGTCCTG
GGCAGCGGCAGCGTCAAGCCCCAGAACCCCAGTTGCGTCAAGGTCGAGGTCCAGCGCAAGTTTCTCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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