Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|8321
Gene name
Locationscaffold_906:2275..4430
Strand-
Gene length (bp)2155
Transcript length (bp)1782
Coding sequence length (bp)1779
Protein length (aa) 593

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00172 Zn_clus Fungal Zn(2)-Cys(6) binuclear cluster domain 3.6E-06 30 63

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|O13360|FLUF_NEUCR Conidial development protein fluffy OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=fl PE=2 SV=1 176 517 5.0E-26
sp|P28349|NIT4_NEUCR Nitrogen assimilation transcription factor nit-4 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=nit-4 PE=3 SV=2 23 509 2.0E-20
sp|P28348|NIRA_EMENI Nitrogen assimilation transcription factor nirA OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=nirA PE=3 SV=1 23 523 3.0E-20
sp|O13360|FLUF_NEUCR Conidial development protein fluffy OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=fl PE=2 SV=1 21 92 4.0E-12
sp|O74915|YJ74_SCHPO Uncharacterized transcriptional regulatory protein C757.04 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC757.04 PE=3 SV=2 21 316 2.0E-07

GO

GO Term Description Terminal node
GO:0006355 regulation of transcription, DNA-templated Yes
GO:0008270 zinc ion binding Yes
GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific Yes
GO:0008150 biological_process No
GO:0051252 regulation of RNA metabolic process No
GO:0060255 regulation of macromolecule metabolic process No
GO:0019222 regulation of metabolic process No
GO:0050794 regulation of cellular process No
GO:0140110 transcription regulator activity No
GO:0031323 regulation of cellular metabolic process No
GO:0065007 biological regulation No
GO:0046872 metal ion binding No
GO:0010468 regulation of gene expression No
GO:0043167 ion binding No
GO:0043169 cation binding No
GO:0003674 molecular_function No
GO:0019219 regulation of nucleobase-containing compound metabolic process No
GO:0051171 regulation of nitrogen compound metabolic process No
GO:0005488 binding No
GO:0080090 regulation of primary metabolic process No
GO:0009889 regulation of biosynthetic process No
GO:0050789 regulation of biological process No
GO:0003700 DNA-binding transcription factor activity No
GO:1903506 regulation of nucleic acid-templated transcription No
GO:2001141 regulation of RNA biosynthetic process No
GO:0046914 transition metal ion binding No
GO:0010556 regulation of macromolecule biosynthetic process No
GO:0031326 regulation of cellular biosynthetic process No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 29 0.45

Transmembrane Domains

(None)

Transcription Factor Class

Transcription Factor Class
(based on PFAM domains)
Fungal Specific TF

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|8321
MSTILPATCSTVCNRRRQMKMPRRVQIRMACQRCRHKRAKCDGRAPCKRCNEAGELCFYDSNQRETKDELRAEIK
RLKRRNEENDRILQAVFTTGGVEASDATTIHNPEGWSKQDDVVVVQPRDEVGDPAVCARCQARLPMTPVSSPAGS
AGSEMSVSLWSPLSLDGAHNSHMDMWTRTQWSVAAVRKLLDDLHTWDYFPYCLLQRDLFLRDYHSGSTRFCSSAL
VYALLSMAMRVVNENGKDVESPGPDWSGSKAFFDEAEAMIRTIETPGSLPDVQALGILSLYRASCGDDDGAQELA
DLFATNAADLCAQGEPGTTDEKGEEYLKAQAMTYCGAVSLTRLLRLTTVRLPGLAAPYNLPDEFIVLDITIDDDE
TSVTAPDFLDNRTLQLLPMKLFQLTEWVYKLLSTSASKDGRFNTRGLFAVYTKCLNWYESIFSLKTEGSDTPFVL
FTHIYYQYCLLSLFRPFAHLSLSDSDIQPQEIYLQAAKSIIELAKSYRNMFSLRRVCSFIPCFVYAVGVAGLPTP
FSCDGAAPLNAQPRSSRRTTVDGDRVQPRRDFSRVSTVEETILAQVAELQAQMGWPKPTNSGDRQSRL
Coding >Ophio5|8321
ATGAGCACCATTCTTCCAGCCACATGCTCGACAGTTTGCAACAGACGCAGGCAGATGAAGATGCCGCGTCGGGTT
CAGATACGGATGGCCTGTCAACGCTGCCGTCACAAAAGAGCAAAGTGTGACGGTCGTGCGCCTTGCAAGAGATGT
AACGAGGCCGGCGAGCTATGCTTCTACGATTCGAACCAGCGCGAGACCAAGGACGAACTGCGAGCCGAGATCAAA
CGTCTGAAGCGGAGGAACGAGGAAAATGACCGGATCCTTCAAGCCGTCTTCACCACCGGCGGCGTCGAAGCAAGC
GATGCCACCACCATTCACAATCCTGAAGGGTGGAGCAAGCAGGATGATGTCGTCGTCGTCCAGCCGAGAGACGAG
GTCGGCGATCCGGCCGTCTGCGCGCGTTGTCAGGCCCGGCTGCCGATGACGCCCGTCTCCTCGCCTGCGGGCTCT
GCAGGTTCCGAGATGTCCGTCTCACTCTGGTCTCCCCTTTCCCTCGATGGGGCGCACAATTCGCACATGGACATG
TGGACACGGACGCAATGGTCGGTAGCCGCGGTGCGAAAGCTACTAGACGATCTTCACACTTGGGATTATTTTCCC
TACTGTCTCTTACAAAGGGACCTGTTCCTGCGTGACTACCATAGCGGCTCGACACGGTTTTGTTCCTCTGCCCTG
GTCTATGCTCTGCTCTCGATGGCGATGCGTGTCGTCAACGAAAACGGCAAGGACGTGGAGAGTCCCGGTCCGGAC
TGGTCCGGAAGCAAGGCCTTCTTCGACGAGGCCGAGGCCATGATCCGGACAATCGAAACCCCTGGTAGCCTGCCC
GATGTCCAGGCGCTTGGCATCCTCTCCTTATATCGGGCCAGCTGCGGAGACGACGACGGGGCTCAGGAGCTGGCC
GACCTGTTCGCCACCAACGCCGCCGACCTCTGTGCCCAGGGGGAGCCGGGCACAACGGACGAGAAGGGTGAGGAA
TATCTAAAGGCGCAAGCAATGACGTACTGCGGCGCCGTGTCCTTGACACGGCTGCTTCGACTCACGACGGTACGC
CTCCCGGGCCTTGCTGCGCCGTACAACCTGCCGGACGAATTCATTGTCCTTGACATTACGATAGATGATGACGAA
ACATCTGTCACTGCTCCAGATTTCCTGGACAACCGCACCCTCCAGCTTCTCCCCATGAAACTATTCCAGCTTACC
GAGTGGGTGTACAAGCTTCTCTCGACGAGCGCCTCAAAGGATGGACGGTTCAATACACGGGGACTCTTTGCCGTT
TATACCAAATGTCTCAACTGGTACGAGAGCATCTTCTCTCTCAAGACGGAGGGTAGTGACACGCCATTCGTGCTA
TTTACTCACATATACTACCAGTATTGTCTTCTCTCCCTCTTCCGACCCTTCGCCCATCTCTCCTTGTCCGACTCG
GATATCCAACCACAGGAGATTTACCTGCAGGCGGCCAAGTCCATCATCGAACTGGCCAAGTCTTATAGGAACATG
TTCTCTCTCCGACGCGTATGCAGCTTCATCCCATGCTTCGTGTACGCCGTTGGCGTCGCCGGCCTCCCCACGCCG
TTCTCTTGCGACGGTGCGGCCCCTCTCAACGCCCAGCCGCGTTCCAGCCGGCGCACAACCGTCGACGGTGACCGT
GTCCAGCCGCGCCGAGATTTCTCACGAGTTTCTACCGTTGAGGAGACCATATTGGCTCAGGTGGCCGAACTGCAG
GCACAGATGGGCTGGCCCAAGCCAACCAACTCAGGAGACAGACAGAGTCGTCTC
Transcript >Ophio5|8321
ATGAGCACCATTCTTCCAGCCACATGCTCGACAGTTTGCAACAGACGCAGGCAGATGAAGATGCCGCGTCGGGTT
CAGATACGGATGGCCTGTCAACGCTGCCGTCACAAAAGAGCAAAGTGTGACGGTCGTGCGCCTTGCAAGAGATGT
AACGAGGCCGGCGAGCTATGCTTCTACGATTCGAACCAGCGCGAGACCAAGGACGAACTGCGAGCCGAGATCAAA
CGTCTGAAGCGGAGGAACGAGGAAAATGACCGGATCCTTCAAGCCGTCTTCACCACCGGCGGCGTCGAAGCAAGC
GATGCCACCACCATTCACAATCCTGAAGGGTGGAGCAAGCAGGATGATGTCGTCGTCGTCCAGCCGAGAGACGAG
GTCGGCGATCCGGCCGTCTGCGCGCGTTGTCAGGCCCGGCTGCCGATGACGCCCGTCTCCTCGCCTGCGGGCTCT
GCAGGTTCCGAGATGTCCGTCTCACTCTGGTCTCCCCTTTCCCTCGATGGGGCGCACAATTCGCACATGGACATG
TGGACACGGACGCAATGGTCGGTAGCCGCGGTGCGAAAGCTACTAGACGATCTTCACACTTGGGATTATTTTCCC
TACTGTCTCTTACAAAGGGACCTGTTCCTGCGTGACTACCATAGCGGCTCGACACGGTTTTGTTCCTCTGCCCTG
GTCTATGCTCTGCTCTCGATGGCGATGCGTGTCGTCAACGAAAACGGCAAGGACGTGGAGAGTCCCGGTCCGGAC
TGGTCCGGAAGCAAGGCCTTCTTCGACGAGGCCGAGGCCATGATCCGGACAATCGAAACCCCTGGTAGCCTGCCC
GATGTCCAGGCGCTTGGCATCCTCTCCTTATATCGGGCCAGCTGCGGAGACGACGACGGGGCTCAGGAGCTGGCC
GACCTGTTCGCCACCAACGCCGCCGACCTCTGTGCCCAGGGGGAGCCGGGCACAACGGACGAGAAGGGTGAGGAA
TATCTAAAGGCGCAAGCAATGACGTACTGCGGCGCCGTGTCCTTGACACGGCTGCTTCGACTCACGACGGTACGC
CTCCCGGGCCTTGCTGCGCCGTACAACCTGCCGGACGAATTCATTGTCCTTGACATTACGATAGATGATGACGAA
ACATCTGTCACTGCTCCAGATTTCCTGGACAACCGCACCCTCCAGCTTCTCCCCATGAAACTATTCCAGCTTACC
GAGTGGGTGTACAAGCTTCTCTCGACGAGCGCCTCAAAGGATGGACGGTTCAATACACGGGGACTCTTTGCCGTT
TATACCAAATGTCTCAACTGGTACGAGAGCATCTTCTCTCTCAAGACGGAGGGTAGTGACACGCCATTCGTGCTA
TTTACTCACATATACTACCAGTATTGTCTTCTCTCCCTCTTCCGACCCTTCGCCCATCTCTCCTTGTCCGACTCG
GATATCCAACCACAGGAGATTTACCTGCAGGCGGCCAAGTCCATCATCGAACTGGCCAAGTCTTATAGGAACATG
TTCTCTCTCCGACGCGTATGCAGCTTCATCCCATGCTTCGTGTACGCCGTTGGCGTCGCCGGCCTCCCCACGCCG
TTCTCTTGCGACGGTGCGGCCCCTCTCAACGCCCAGCCGCGTTCCAGCCGGCGCACAACCGTCGACGGTGACCGT
GTCCAGCCGCGCCGAGATTTCTCACGAGTTTCTACCGTTGAGGAGACCATATTGGCTCAGGTGGCCGAACTGCAG
GCACAGATGGGCTGGCCCAAGCCAACCAACTCAGGAGACAGACAGAGTCGTCTCTAA
Gene >Ophio5|8321
ATGAGCACCATTCTTCCAGCCACATGCTCGACAGTTTGCAACAGACGCAGGCAGATGAAGATGCCGCGTCGGGTT
CAGATACGGATGGCCTGTCAACGCTGCCGTCACAAAAGAGCAAAGGTTAGTGATGTCACCCATGGCCGGGAATCA
GCTCCCGTCCAACCCCTTTCCCCCCCCTGACTGAACAAGGTTGGTTGACTCACAGACGCGGCTTTCCCGTCGCCT
CCCCTTTTTCTTTCATTGTAGTGTGACGGTCGTGCGCCTTGCAAGAGATGTAACGAGGCCGGCGAGCTATGCTTC
TACGATTCGAACCAGCGCGAGACCAAGGACGAACTGCGAGCCGAGATCAAACGTCTGAAGCGGAGGAACGAGGAA
AATGACCGGATCCTTCAAGCCGTCTTCACCACCGGCGGCGTCGAAGCAAGCGATGCCACCACCATTCACAATCCT
GAAGGGTGGAGCAAGCAGGATGATGTCGTCGTCGTCCAGCCGAGAGACGAGGTCGGCGATCCGGCCGTCTGCGCG
CGTTGTCAGGCCCGGCTGCCGATGACGCCCGTCTCCTCGCCTGCGGGCTCTGCAGGTTCCGAGATGTCCGTCTCA
CTCTGGTCTCCCCTTTCCCTCGATGGGGCGCACAATTCGCACATGGACATGTGGACACGGACGCAATGGTCGGTA
GCCGCGGTGCGAAAGCTACTAGACGATCTTCACACTTGGGATTATTTTCCCTACTGTCTCTTACAAAGGGACCTG
TTCCTGCGTGACTACCATAGCGGCTCGACACGGTTTTGTTCCTCTGCCCTGGTCTATGCTCTGCTCTCGATGGCG
ATGCGTGTCGTCAACGAAAACGGCAAGGACGTGGAGAGTCCCGGTCCGGACTGGTCCGGAAGCAAGGCCTTCTTC
GACGAGGCCGAGGCCATGATCCGGACAATCGAAACCCCTGGTAGCCTGCCCGATGTCCAGGCGCTTGGCATCCTC
TCCTTATATCGGGCCAGCTGCGGAGACGACGACGGGGCTCAGGAGCTGGCCGACCTGTTCGCCACCAACGCCGCC
GACCTCTGTGCCCAGGGGGAGCCGGGCACAACGGACGAGAAGGGTGAGGAATATCTAAAGGCGCAAGCAATGACG
TACTGCGGCGCCGTGTCCTTGACACGGTGTGTAGAGCCATTATTTCCCGTATCGATCCGTCCGAATCAGCGGCTA
CTGGTCTAACTCTCTCGCGCAGGCTGCTTCGACTCACGACGGTACGCCTCCCGGGCCTTGCTGCGCCGTACAACC
TGCCGGACGAATTCATTGTCCTTGACATTACGATAGATGATGACGAAACATCTGTCACTGCTCCAGGTGTGTTCG
AGACGGCAATTCGAGGTGATGGAAGATGAGGCAGCTGTGGATGCACCGCGGATCTCAGAATAACACGGCTGCAGA
TTTCCTGGACAACCGCACCCTCCAGCTTCTCCCCATGAAACTATTCCAGCTTACCGAGTGGGTGTACAAGCTTCT
CTCGACGAGCGCCTCAAAGGATGGACGGTTCAATACACGGGGACTCTTTGCCGTTTATACCAAATGTCTCAACTG
GTACGAGAGCATCTTCTCTCTCAAGACGGAGGGTAGTGACACGCCATTCGTGCTATTTACTCAGTGAGCCTCTCC
TTTCCGCGACCTGCTTTTTGTCGCGTACCTTCATTTTTTCTTCCGTCTCGAGGTGGCAAAACGTAGCTCTGACAG
TCACAGCATATACTACCAGTATTGTCTTCTCTCCCTCTTCCGACCCTTCGCCCATCTCTCCTTGTCCGACTCGGA
TATCCAACCACAGGAGATTTACCTGCAGGCGGCCAAGTCCATCATCGAACTGGCCAAGTCTTATAGGAACATGTT
CTCTCTCCGACGCGTATGCAGCTTCATCCCATGCTTCGTGTACGCCGTTGGCGTCGCCGGCCTCCCCACGCCGTT
CTCTTGCGACGGTGCGGCCCCTCTCAACGCCCAGCCGCGTTCCAGCCGGCGCACAACCGTCGACGGTGACCGTGT
CCAGCCGCGCCGAGATTTCTCACGAGTTTCTACCGTTGAGGAGACCATATTGGCTCAGGTGGCCGAACTGCAGGC
ACAGATGGGCTGGCCCAAGCCAACCAACTCAGGAGACAGACAGAGTCGTCTCTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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