Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|8267
Gene name
Locationscaffold_9:53259..54209
Strand-
Gene length (bp)950
Transcript length (bp)879
Coding sequence length (bp)876
Protein length (aa) 292

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF20246 DUF6601 Family of unknown function (DUF6601) 4.1E-27 56 137
PF20246 DUF6601 Family of unknown function (DUF6601) 4.6E-25 161 272

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 12 0.45

Transmembrane Domains

Domain # Start End Length
1 225 247 22
2 262 284 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|8267
MVAAPHLRPEPAALFPPKSAPPFPPEHELSTDDSTLIGTLPGYPGLYLGDRPQLWAFLNSEIWATDLEALAPRLW
WMSKPDSANISPLHRQAIKRRAFVVTEDPRLHLGWIDNRIFFKPLPRYLLSHNFWRHHLCPETHPVVAYDERRAW
LARPDSSPRSQGVSWTQFSRLSSDLAAISDDDVSPRYLFGEIRLTRLNFYAPFLLGKSNHQRVEYQYASYFARSY
APLLFVIGVTSVILAALQVAVAVDQDQVKSGRAIATLGLWLSIIVMIVSCTLFFGLAILLVYKVGKE
Coding >Ophio5|8267
ATGGTTGCGGCCCCACACCTCCGGCCCGAGCCGGCCGCTCTCTTTCCGCCGAAGTCGGCCCCACCGTTCCCGCCA
GAGCACGAGCTCAGCACAGACGACTCCACCCTGATAGGAACGCTCCCCGGGTATCCCGGCCTTTATCTCGGCGAC
CGGCCTCAGCTCTGGGCCTTTCTCAACTCCGAGATCTGGGCGACGGATCTCGAAGCCCTGGCTCCTCGACTCTGG
TGGATGTCCAAGCCCGACAGCGCCAATATCTCTCCGCTGCACCGTCAGGCCATCAAGCGCAGAGCCTTCGTTGTG
ACTGAGGATCCCCGGCTGCACCTCGGGTGGATTGATAACCGCATCTTCTTTAAGCCTTTGCCGCGATACCTTTTG
TCGCATAACTTCTGGCGTCATCATCTTTGCCCGGAAACCCATCCTGTTGTCGCCTACGACGAGCGCCGGGCCTGG
CTCGCCCGACCCGACTCTTCGCCTCGTTCCCAAGGCGTCTCGTGGACTCAGTTCTCGCGCTTGTCCTCAGATCTG
GCCGCCATTTCCGATGACGACGTCAGCCCTCGCTACCTCTTTGGCGAGATACGGCTGACGAGGCTCAACTTCTAC
GCGCCCTTTCTCCTGGGAAAATCCAACCATCAGAGAGTCGAGTACCAGTACGCCTCCTACTTCGCTCGTTCCTAC
GCACCTTTGCTGTTCGTCATCGGCGTCACCTCCGTCATCCTCGCTGCGCTGCAGGTCGCCGTTGCCGTCGATCAG
GACCAGGTCAAGAGTGGCCGAGCGATTGCGACGCTGGGGCTATGGCTGAGCATAATCGTCATGATCGTATCTTGC
ACTCTTTTCTTCGGCCTTGCCATTCTTCTAGTATACAAAGTGGGGAAGGAG
Transcript >Ophio5|8267
ATGGTTGCGGCCCCACACCTCCGGCCCGAGCCGGCCGCTCTCTTTCCGCCGAAGTCGGCCCCACCGTTCCCGCCA
GAGCACGAGCTCAGCACAGACGACTCCACCCTGATAGGAACGCTCCCCGGGTATCCCGGCCTTTATCTCGGCGAC
CGGCCTCAGCTCTGGGCCTTTCTCAACTCCGAGATCTGGGCGACGGATCTCGAAGCCCTGGCTCCTCGACTCTGG
TGGATGTCCAAGCCCGACAGCGCCAATATCTCTCCGCTGCACCGTCAGGCCATCAAGCGCAGAGCCTTCGTTGTG
ACTGAGGATCCCCGGCTGCACCTCGGGTGGATTGATAACCGCATCTTCTTTAAGCCTTTGCCGCGATACCTTTTG
TCGCATAACTTCTGGCGTCATCATCTTTGCCCGGAAACCCATCCTGTTGTCGCCTACGACGAGCGCCGGGCCTGG
CTCGCCCGACCCGACTCTTCGCCTCGTTCCCAAGGCGTCTCGTGGACTCAGTTCTCGCGCTTGTCCTCAGATCTG
GCCGCCATTTCCGATGACGACGTCAGCCCTCGCTACCTCTTTGGCGAGATACGGCTGACGAGGCTCAACTTCTAC
GCGCCCTTTCTCCTGGGAAAATCCAACCATCAGAGAGTCGAGTACCAGTACGCCTCCTACTTCGCTCGTTCCTAC
GCACCTTTGCTGTTCGTCATCGGCGTCACCTCCGTCATCCTCGCTGCGCTGCAGGTCGCCGTTGCCGTCGATCAG
GACCAGGTCAAGAGTGGCCGAGCGATTGCGACGCTGGGGCTATGGCTGAGCATAATCGTCATGATCGTATCTTGC
ACTCTTTTCTTCGGCCTTGCCATTCTTCTAGTATACAAAGTGGGGAAGGAGTGA
Gene >Ophio5|8267
ATGGTTGCGGCCCCACACCTCCGGCCCGAGCCGGCCGCTCTCTTTCCGCCGAAGTCGGCCCCACCGTTCCCGCCA
GAGCACGAGCTCAGCACAGACGACTCCACCCTGATAGGAACGCTCCCCGGGTATCCCGGCCTTTATCTCGGCGAC
CGGCCTCAGCTCTGGGCCTTTCTCAACTCCGAGATCTGGGCGACGGATCTCGAAGCCCTGGCTCCTCGACTCTGG
TGGATGTCCAAGCCCGACAGCGCCAATATCTCTCCGCTGCACCGTCAGGCCATCAAGCGCAGAGCCTTCGTTGTG
ACTGAGGATCCCCGGCTGCACCTCGGGTGGATTGATAACCGCATCTTCTTTAAGCCTTTGCCGCGATACCTTTTG
TCGCATAACTTCTGGCGTCATCATCTTTGCCCGGAAACCCATCCTGTTGTCGCCTACGACGAGCGCCGGGCCTGG
CTCGCCCGTGCGGCCTTGGAATATCTACGCTCATATCATCATCTGGTGCGGTACGAGTCGGACATGCGTATTGCT
CAGGACCCGACTCTTCGCCTCGTTCCCAAGGCGTCTCGTGGACTCAGTTCTCGCGCTTGTCCTCAGATCTGGCCG
CCATTTCCGATGACGACGTCAGCCCTCGCTACCTCTTTGGCGAGATACGGCTGACGAGGCTCAACTTCTACGCGC
CCTTTCTCCTGGGAAAATCCAACCATCAGAGAGTCGAGTACCAGTACGCCTCCTACTTCGCTCGTTCCTACGCAC
CTTTGCTGTTCGTCATCGGCGTCACCTCCGTCATCCTCGCTGCGCTGCAGGTCGCCGTTGCCGTCGATCAGGACC
AGGTCAAGAGTGGCCGAGCGATTGCGACGCTGGGGCTATGGCTGAGCATAATCGTCATGATCGTATCTTGCACTC
TTTTCTTCGGCCTTGCCATTCTTCTAGTATACAAAGTGGGGAAGGAGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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