Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|8264
Gene name
Locationscaffold_9:46685..47553
Strand+
Gene length (bp)868
Transcript length (bp)807
Coding sequence length (bp)804
Protein length (aa) 268

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 21 0.5

Transmembrane Domains

Domain # Start End Length
1 7 28 21

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|8264
MKRVQILAALAVAFAAVADASISYIYTLKPNTNADLFVEQVEASGLAHFRRKSVDELSTTVSFDFDTQKAADDVT
HMAVVEKVYPLVKKPKVDGFKSMGHRRSRRQLAAKGLGGRIQSRNVDDDDSLVRRSDSLNMPHQARRRDAFPGRM
PLQSFSQDNDDLAGPQAVDGHKPAKRAVGGQRPAVHIFDDDGDDSLVRRSGSLNMPHQARRRDAFPGRMPLQSFS
QDNDDLANPQALGGRKPSKRAVGGHRPAVHIFDDEDDKTWSRL
Coding >Ophio5|8264
ATGAAACGTGTACAAATTCTCGCGGCGCTTGCGGTTGCCTTTGCCGCCGTGGCCGATGCCTCGATCTCGTACATC
TACACACTCAAGCCGAACACTAATGCCGACTTGTTTGTGGAACAGGTCGAAGCCAGTGGCCTCGCGCACTTTCGT
CGGAAGAGCGTGGATGAGCTGTCGACGACAGTTTCATTCGACTTTGACACTCAGAAGGCGGCGGATGATGTAACG
CACATGGCAGTCGTCGAGAAGGTGTATCCGCTCGTCAAGAAACCCAAAGTTGATGGTTTCAAGAGCATGGGACAT
CGTCGTTCGAGACGGCAGCTGGCGGCTAAGGGTCTCGGTGGAAGGATACAGTCTCGGAACGTCGACGACGACGAC
AGCCTGGTTCGCCGGTCTGACTCGCTCAACATGCCGCATCAGGCGAGACGACGAGATGCGTTTCCCGGAAGAATG
CCTCTCCAGAGCTTCAGCCAAGACAACGACGACCTTGCAGGCCCTCAGGCTGTCGACGGGCACAAACCTGCCAAA
CGGGCAGTGGGCGGACAACGGCCTGCGGTCCACATATTCGACGACGACGGCGATGACAGCCTGGTTCGCCGGTCT
GGCTCGCTCAACATGCCGCATCAGGCGAGGCGACGTGATGCGTTTCCCGGAAGAATGCCTCTCCAGAGCTTCAGC
CAAGACAACGACGACCTTGCAAACCCTCAGGCTCTCGGCGGGCGCAAACCTAGCAAACGGGCAGTGGGCGGACAT
CGGCCTGCAGTCCACATATTCGACGACGAAGATGACAAGACCTGGAGCCGACTA
Transcript >Ophio5|8264
ATGAAACGTGTACAAATTCTCGCGGCGCTTGCGGTTGCCTTTGCCGCCGTGGCCGATGCCTCGATCTCGTACATC
TACACACTCAAGCCGAACACTAATGCCGACTTGTTTGTGGAACAGGTCGAAGCCAGTGGCCTCGCGCACTTTCGT
CGGAAGAGCGTGGATGAGCTGTCGACGACAGTTTCATTCGACTTTGACACTCAGAAGGCGGCGGATGATGTAACG
CACATGGCAGTCGTCGAGAAGGTGTATCCGCTCGTCAAGAAACCCAAAGTTGATGGTTTCAAGAGCATGGGACAT
CGTCGTTCGAGACGGCAGCTGGCGGCTAAGGGTCTCGGTGGAAGGATACAGTCTCGGAACGTCGACGACGACGAC
AGCCTGGTTCGCCGGTCTGACTCGCTCAACATGCCGCATCAGGCGAGACGACGAGATGCGTTTCCCGGAAGAATG
CCTCTCCAGAGCTTCAGCCAAGACAACGACGACCTTGCAGGCCCTCAGGCTGTCGACGGGCACAAACCTGCCAAA
CGGGCAGTGGGCGGACAACGGCCTGCGGTCCACATATTCGACGACGACGGCGATGACAGCCTGGTTCGCCGGTCT
GGCTCGCTCAACATGCCGCATCAGGCGAGGCGACGTGATGCGTTTCCCGGAAGAATGCCTCTCCAGAGCTTCAGC
CAAGACAACGACGACCTTGCAAACCCTCAGGCTCTCGGCGGGCGCAAACCTAGCAAACGGGCAGTGGGCGGACAT
CGGCCTGCAGTCCACATATTCGACGACGAAGATGACAAGACCTGGAGCCGACTATAG
Gene >Ophio5|8264
ATGAAACGTGTACAAATTCTCGCGGCGCTTGCGGTTGCCTTTGCCGCCGTGGCCGATGCCTCGATCTCGTACATC
TACACACTCAAGCCGAACACTGTACGTGCAACCGATTTAGACTCGAGGAGAGGCAGTCTGCTAACAACAAGTCCT
CTTACAGAATGCCGACTTGTTTGTGGAACAGGTCGAAGCCAGTGGCCTCGCGCACTTTCGTCGGAAGAGCGTGGA
TGAGCTGTCGACGACAGTTTCATTCGACTTTGACACTCAGAAGGCGGCGGATGATGTAACGCACATGGCAGTCGT
CGAGAAGGTGTATCCGCTCGTCAAGAAACCCAAAGTTGATGGTTTCAAGAGCATGGGACATCGTCGTTCGAGACG
GCAGCTGGCGGCTAAGGGTCTCGGTGGAAGGATACAGTCTCGGAACGTCGACGACGACGACAGCCTGGTTCGCCG
GTCTGACTCGCTCAACATGCCGCATCAGGCGAGACGACGAGATGCGTTTCCCGGAAGAATGCCTCTCCAGAGCTT
CAGCCAAGACAACGACGACCTTGCAGGCCCTCAGGCTGTCGACGGGCACAAACCTGCCAAACGGGCAGTGGGCGG
ACAACGGCCTGCGGTCCACATATTCGACGACGACGGCGATGACAGCCTGGTTCGCCGGTCTGGCTCGCTCAACAT
GCCGCATCAGGCGAGGCGACGTGATGCGTTTCCCGGAAGAATGCCTCTCCAGAGCTTCAGCCAAGACAACGACGA
CCTTGCAAACCCTCAGGCTCTCGGCGGGCGCAAACCTAGCAAACGGGCAGTGGGCGGACATCGGCCTGCAGTCCA
CATATTCGACGACGAAGATGACAAGACCTGGAGCCGACTATAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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