Protein ID | Ophio5|825 |
Gene name | |
Location | scaffold_1239:423..2102 |
Strand | - |
Gene length (bp) | 1679 |
Transcript length (bp) | 1557 |
Coding sequence length (bp) | 1554 |
Protein length (aa) | 518 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF20400 | BAR_4 | BAR-like domain | 2.3E-33 | 94 | 275 |
PF20399 | PH_20 | PH domain | 3.8E-20 | 295 | 375 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|O94447|SLM1_SCHPO | Cytoskeletal signaling protein slm1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=slm1 PE=1 SV=1 | 24 | 409 | 1.0E-46 |
sp|P53955|SLM2_YEAST | Phosphatidylinositol 4,5-bisphosphate-binding protein SLM2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SLM2 PE=1 SV=1 | 39 | 413 | 2.0E-16 |
sp|P40485|SLM1_YEAST | Phosphatidylinositol 4,5-bisphosphate-binding protein SLM1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SLM1 PE=1 SV=1 | 39 | 415 | 1.0E-14 |
sp|Q06108|RGC1_YEAST | Regulator of the glycerol channel 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RGC1 PE=1 SV=1 | 109 | 343 | 2.0E-12 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 28 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophio5|825 MSGEPSPTSTLHSRVVTGLTSNNGGEAVPDEDPTTTAGLLAERLQAWKHAVSYLDEYMIVVEKIHGRQAKEYEKA LKMISNPLRQGHHFDQSLGGIAGFFENVRANTQSLINTNLETEKSLKGSVLPILDRLHKEIKHKSKELQSGAQSG AKELEKLRNATQKQIELLGQQTASYDSAGGRFHGHDDPYVVMRSVMHRLSNQVVAENNHHNDLVAVQGNFKTFEA HIIAVLQQAVEAFVQLVGGQGEKTRALFSDMLGTVQAVPSDFEWVNFAHRCASRLANPADPPRSVDAIQFPNMDH GSTKPLIEGSLERKSRNKLSWGLSTGYYVVTPARYLHEFKDSDDTRQDPKPELSIYLPDATIGAPHEDRFTVKGK DRSKTLSSKLTGSSELSFKAHTPEDAMKWFQVIHAVSSSGAASSEPGSPAVDTSAAATTTTPTAGTTPTTPKTPT TPMTPTTTTADEKRPVVDGGDDKKPIAEPADVVPGHKAQEAGVVGTALTTSTPTAAPVVEEKKSEAAA |
Coding | >Ophio5|825 ATGTCTGGCGAGCCCTCGCCCACGTCGACGCTGCACTCGCGCGTCGTCACGGGCCTCACCTCCAACAATGGAGGC GAGGCTGTGCCCGACGAAGATCCGACGACGACGGCCGGTCTGCTCGCCGAGCGCCTTCAGGCCTGGAAGCACGCC GTGTCCTACCTGGATGAGTACATGATCGTCGTCGAGAAGATTCACGGCCGCCAGGCCAAGGAGTACGAGAAGGCG CTCAAGATGATATCCAACCCTTTGCGCCAGGGCCATCATTTCGATCAGAGCCTGGGCGGCATCGCCGGCTTCTTC GAAAATGTGCGCGCCAACACGCAGTCCCTCATCAACACCAATCTCGAGACGGAAAAGAGCCTCAAGGGTTCCGTC TTGCCTATCCTCGACCGCCTGCACAAGGAGATCAAGCACAAGTCCAAGGAGCTGCAAAGCGGCGCCCAGAGCGGC GCAAAGGAGCTCGAGAAGCTGCGCAACGCAACCCAGAAGCAGATCGAGCTGCTGGGCCAGCAGACGGCCTCGTAC GATTCGGCTGGCGGCCGCTTCCACGGCCACGACGACCCTTACGTGGTGATGCGCTCCGTCATGCACCGGCTGAGC AACCAGGTCGTGGCCGAGAACAACCATCACAACGACCTGGTGGCCGTGCAGGGCAACTTCAAGACGTTCGAGGCG CACATTATCGCCGTGCTCCAGCAGGCCGTCGAGGCCTTTGTTCAGCTCGTCGGCGGCCAGGGCGAGAAGACGCGC GCCCTCTTCAGCGACATGCTCGGTACCGTCCAGGCCGTCCCCTCGGACTTTGAATGGGTCAACTTCGCCCACCGC TGCGCCAGCAGGCTGGCCAACCCGGCCGATCCTCCTCGCTCCGTCGACGCCATCCAGTTCCCTAACATGGACCAC GGCTCGACCAAGCCGCTGATAGAGGGCTCGCTCGAGCGCAAGTCGCGCAACAAGCTCTCGTGGGGCCTGTCGACG GGCTACTACGTCGTCACCCCGGCCCGCTACCTGCACGAGTTCAAGGACTCGGACGACACGCGTCAGGATCCCAAG CCCGAGCTGTCCATCTACCTTCCCGACGCCACCATCGGCGCCCCGCACGAGGACCGCTTCACCGTCAAGGGCAAG GACCGCAGCAAGACGCTCAGCAGCAAACTGACGGGCAGCTCCGAGCTGTCCTTCAAGGCCCACACCCCGGAAGAC GCCATGAAGTGGTTCCAGGTCATCCACGCCGTCAGCAGCTCCGGCGCCGCCTCCTCCGAACCCGGCTCGCCTGCC GTCGATACCTCGGCGGCGGCGACGACGACGACTCCGACGGCCGGCACGACGCCGACGACGCCCAAGACTCCGACG ACGCCCATGACGCCAACCACGACGACGGCCGACGAGAAGAGGCCGGTCGTCGACGGCGGCGACGACAAGAAGCCG ATTGCCGAACCGGCCGATGTCGTCCCGGGCCACAAGGCGCAGGAGGCGGGCGTCGTCGGTACCGCCCTCACCACG TCCACTCCTACTGCCGCTCCCGTCGTCGAGGAGAAGAAGAGTGAGGCTGCTGCG |
Transcript | >Ophio5|825 ATGTCTGGCGAGCCCTCGCCCACGTCGACGCTGCACTCGCGCGTCGTCACGGGCCTCACCTCCAACAATGGAGGC GAGGCTGTGCCCGACGAAGATCCGACGACGACGGCCGGTCTGCTCGCCGAGCGCCTTCAGGCCTGGAAGCACGCC GTGTCCTACCTGGATGAGTACATGATCGTCGTCGAGAAGATTCACGGCCGCCAGGCCAAGGAGTACGAGAAGGCG CTCAAGATGATATCCAACCCTTTGCGCCAGGGCCATCATTTCGATCAGAGCCTGGGCGGCATCGCCGGCTTCTTC GAAAATGTGCGCGCCAACACGCAGTCCCTCATCAACACCAATCTCGAGACGGAAAAGAGCCTCAAGGGTTCCGTC TTGCCTATCCTCGACCGCCTGCACAAGGAGATCAAGCACAAGTCCAAGGAGCTGCAAAGCGGCGCCCAGAGCGGC GCAAAGGAGCTCGAGAAGCTGCGCAACGCAACCCAGAAGCAGATCGAGCTGCTGGGCCAGCAGACGGCCTCGTAC GATTCGGCTGGCGGCCGCTTCCACGGCCACGACGACCCTTACGTGGTGATGCGCTCCGTCATGCACCGGCTGAGC AACCAGGTCGTGGCCGAGAACAACCATCACAACGACCTGGTGGCCGTGCAGGGCAACTTCAAGACGTTCGAGGCG CACATTATCGCCGTGCTCCAGCAGGCCGTCGAGGCCTTTGTTCAGCTCGTCGGCGGCCAGGGCGAGAAGACGCGC GCCCTCTTCAGCGACATGCTCGGTACCGTCCAGGCCGTCCCCTCGGACTTTGAATGGGTCAACTTCGCCCACCGC TGCGCCAGCAGGCTGGCCAACCCGGCCGATCCTCCTCGCTCCGTCGACGCCATCCAGTTCCCTAACATGGACCAC GGCTCGACCAAGCCGCTGATAGAGGGCTCGCTCGAGCGCAAGTCGCGCAACAAGCTCTCGTGGGGCCTGTCGACG GGCTACTACGTCGTCACCCCGGCCCGCTACCTGCACGAGTTCAAGGACTCGGACGACACGCGTCAGGATCCCAAG CCCGAGCTGTCCATCTACCTTCCCGACGCCACCATCGGCGCCCCGCACGAGGACCGCTTCACCGTCAAGGGCAAG GACCGCAGCAAGACGCTCAGCAGCAAACTGACGGGCAGCTCCGAGCTGTCCTTCAAGGCCCACACCCCGGAAGAC GCCATGAAGTGGTTCCAGGTCATCCACGCCGTCAGCAGCTCCGGCGCCGCCTCCTCCGAACCCGGCTCGCCTGCC GTCGATACCTCGGCGGCGGCGACGACGACGACTCCGACGGCCGGCACGACGCCGACGACGCCCAAGACTCCGACG ACGCCCATGACGCCAACCACGACGACGGCCGACGAGAAGAGGCCGGTCGTCGACGGCGGCGACGACAAGAAGCCG ATTGCCGAACCGGCCGATGTCGTCCCGGGCCACAAGGCGCAGGAGGCGGGCGTCGTCGGTACCGCCCTCACCACG TCCACTCCTACTGCCGCTCCCGTCGTCGAGGAGAAGAAGAGTGAGGCTGCTGCGTGA |
Gene | >Ophio5|825 ATGTCTGGCGAGCCCTCGCCCACGTCGACGCTGCACTCGCGCGTCGTCACGGGCCTCACCTCCAACAATGGAGGC GAGGCTGTGCCCGACGAAGATCCGACGACGGTAGGTCCGCTAGACGGCCGCCACCAATGGCCGAGAGCCCGCTGA TTTGTTCCTGTTGTCCGTCAGACGGCCGGTCTGCTCGCCGAGCGCCTTCAGGCCTGGAAGCACGCCGTGTCCTAC CTGGATGAGTACATGATCGTCGTCGAGAAGATTCACGGCCGCCAGGCCAAGGAGTACGAGAAGGCGCTCAAGGTA GGAAAGTTATGCTGCCTATATCCAATCGAATTCGATACTAAAGGCAACAACAGATGATATCCAACCCTTTGCGCC AGGGCCATCATTTCGATCAGAGCCTGGGCGGCATCGCCGGCTTCTTCGAAAATGTGCGCGCCAACACGCAGTCCC TCATCAACACCAATCTCGAGACGGAAAAGAGCCTCAAGGGTTCCGTCTTGCCTATCCTCGACCGCCTGCACAAGG AGATCAAGCACAAGTCCAAGGAGCTGCAAAGCGGCGCCCAGAGCGGCGCAAAGGAGCTCGAGAAGCTGCGCAACG CAACCCAGAAGCAGATCGAGCTGCTGGGCCAGCAGACGGCCTCGTACGATTCGGCTGGCGGCCGCTTCCACGGCC ACGACGACCCTTACGTGGTGATGCGCTCCGTCATGCACCGGCTGAGCAACCAGGTCGTGGCCGAGAACAACCATC ACAACGACCTGGTGGCCGTGCAGGGCAACTTCAAGACGTTCGAGGCGCACATTATCGCCGTGCTCCAGCAGGCCG TCGAGGCCTTTGTTCAGCTCGTCGGCGGCCAGGGCGAGAAGACGCGCGCCCTCTTCAGCGACATGCTCGGTACCG TCCAGGCCGTCCCCTCGGACTTTGAATGGGTCAACTTCGCCCACCGCTGCGCCAGCAGGCTGGCCAACCCGGCCG ATCCTCCTCGCTCCGTCGACGCCATCCAGTTCCCTAACATGGACCACGGCTCGACCAAGCCGCTGATAGAGGGCT CGCTCGAGCGCAAGTCGCGCAACAAGCTCTCGTGGGGCCTGTCGACGGGCTACTACGTCGTCACCCCGGCCCGCT ACCTGCACGAGTTCAAGGACTCGGACGACACGCGTCAGGATCCCAAGCCCGAGCTGTCCATCTACCTTCCCGACG CCACCATCGGCGCCCCGCACGAGGACCGCTTCACCGTCAAGGGCAAGGACCGCAGCAAGACGCTCAGCAGCAAAC TGACGGGCAGCTCCGAGCTGTCCTTCAAGGCCCACACCCCGGAAGACGCCATGAAGTGGTTCCAGGTCATCCACG CCGTCAGCAGCTCCGGCGCCGCCTCCTCCGAACCCGGCTCGCCTGCCGTCGATACCTCGGCGGCGGCGACGACGA CGACTCCGACGGCCGGCACGACGCCGACGACGCCCAAGACTCCGACGACGCCCATGACGCCAACCACGACGACGG CCGACGAGAAGAGGCCGGTCGTCGACGGCGGCGACGACAAGAAGCCGATTGCCGAACCGGCCGATGTCGTCCCGG GCCACAAGGCGCAGGAGGCGGGCGTCGTCGGTACCGCCCTCACCACGTCCACTCCTACTGCCGCTCCCGTCGTCG AGGAGAAGAAGAGTGAGGCTGCTGCGTGA |