© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ophio5|824 |
| Gene name | |
| Location | scaffold_1238:338..2499 |
| Strand | + |
| Gene length (bp) | 2161 |
| Transcript length (bp) | 2004 |
| Coding sequence length (bp) | 2001 |
| Protein length (aa) | 667 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF03142 | Chitin_synth_2 | Chitin synthase | 1.5E-16 | 254 | 423 |
| PF13632 | Glyco_trans_2_3 | Glycosyl transferase family group 2 | 3.6E-14 | 255 | 489 |
| PF13641 | Glyco_tranf_2_3 | Glycosyltransferase like family 2 | 1.2E-07 | 140 | 417 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P78746|CHSD_ASPFU | Chitin synthase D OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=chsD PE=3 SV=1 | 67 | 654 | 0.0E+00 |
| sp|O13353|CHS4_MAGO7 | Chitin synthase 4 OS=Magnaporthe oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) GN=CHS4 PE=3 SV=2 | 255 | 429 | 1.0E-10 |
| sp|Q4P9K9|CHS8_USTMA | Chitin synthase 8 OS=Ustilago maydis (strain 521 / FGSC 9021) GN=CHS8 PE=3 SV=1 | 254 | 427 | 2.0E-10 |
| sp|P78611|CHSD_EMENI | Chitin synthase D OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=chsD PE=3 SV=4 | 255 | 429 | 3.0E-10 |
| sp|J9VXM5|CHS3_CRYNH | Chitin synthase 3 OS=Cryptococcus neoformans var. grubii serotype A (strain H99 / ATCC 208821 / CBS 10515 / FGSC 9487) GN=CHS3 PE=3 SV=1 | 282 | 427 | 3.0E-10 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P78746|CHSD_ASPFU | Chitin synthase D OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=chsD PE=3 SV=1 | 67 | 654 | 0.0E+00 |
| sp|O13353|CHS4_MAGO7 | Chitin synthase 4 OS=Magnaporthe oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) GN=CHS4 PE=3 SV=2 | 255 | 429 | 1.0E-10 |
| sp|Q4P9K9|CHS8_USTMA | Chitin synthase 8 OS=Ustilago maydis (strain 521 / FGSC 9021) GN=CHS8 PE=3 SV=1 | 254 | 427 | 2.0E-10 |
| sp|P78611|CHSD_EMENI | Chitin synthase D OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=chsD PE=3 SV=4 | 255 | 429 | 3.0E-10 |
| sp|J9VXM5|CHS3_CRYNH | Chitin synthase 3 OS=Cryptococcus neoformans var. grubii serotype A (strain H99 / ATCC 208821 / CBS 10515 / FGSC 9487) GN=CHS3 PE=3 SV=1 | 282 | 427 | 3.0E-10 |
| sp|P29465|CHS3_YEAST | Chitin synthase 3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CHS3 PE=1 SV=3 | 255 | 429 | 5.0E-10 |
| sp|P87073|CHS1_PHYB8 | Chitin synthase 1 OS=Phycomyces blakesleeanus (strain ATCC 8743b / FGSC 10004 / NBRC 33097 / NRRL 1555) GN=chs1 PE=3 SV=1 | 281 | 511 | 9.0E-10 |
| sp|P0DB60|HASA_STRP3 | Hyaluronan synthase OS=Streptococcus pyogenes serotype M3 (strain ATCC BAA-595 / MGAS315) GN=hasA PE=3 SV=1 | 141 | 511 | 1.0E-09 |
| sp|Q01285|CHS4_NEUCR | Chitin synthase 4 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=chs-4 PE=3 SV=3 | 255 | 429 | 1.0E-09 |
| sp|P0C0H1|HASA_STRP1 | Hyaluronan synthase OS=Streptococcus pyogenes serotype M1 GN=hasA PE=3 SV=1 | 141 | 511 | 1.0E-09 |
| sp|P0DB61|HASA_STRPQ | Hyaluronan synthase OS=Streptococcus pyogenes serotype M3 (strain SSI-1) GN=hasA PE=3 SV=1 | 141 | 511 | 1.0E-09 |
| sp|Q8NKX1|HASA_STRP8 | Hyaluronan synthase OS=Streptococcus pyogenes serotype M18 (strain MGAS8232) GN=hasA PE=3 SV=1 | 141 | 511 | 1.0E-09 |
| sp|P0C0H0|HASA_STRPY | Hyaluronan synthase OS=Streptococcus pyogenes GN=hasA PE=3 SV=1 | 141 | 511 | 1.0E-09 |
| sp|Q5X9A9|HASA_STRP6 | Hyaluronan synthase OS=Streptococcus pyogenes serotype M6 (strain ATCC BAA-946 / MGAS10394) GN=hasA PE=3 SV=1 | 141 | 511 | 1.0E-09 |
| sp|P30594|CHS1_RHIOL | Chitin synthase 1 OS=Rhizopus oligosporus GN=CHS1 PE=3 SV=1 | 307 | 477 | 2.0E-09 |
| sp|O13394|CHS5_USTMA | Chitin synthase 5 OS=Ustilago maydis (strain 521 / FGSC 9021) GN=CHS5 PE=3 SV=3 | 254 | 429 | 2.0E-09 |
| sp|P08004|CHS1_YEAST | Chitin synthase 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CHS1 PE=1 SV=2 | 307 | 433 | 1.0E-08 |
| sp|P30573|CHS3_CANAX | Chitin synthase 3 OS=Candida albicans GN=CHS3 PE=3 SV=1 | 254 | 429 | 1.0E-08 |
| sp|P30595|CHS2_RHIOL | Chitin synthase 2 OS=Rhizopus oligosporus GN=CHS2 PE=3 SV=1 | 281 | 457 | 2.0E-08 |
| sp|O13395|CHS6_USTMA | Chitin synthase 6 OS=Ustilago maydis (strain 521 / FGSC 9021) GN=CHS6 PE=3 SV=2 | 254 | 422 | 2.0E-08 |
| sp|O13356|CHS1_CRYNH | Chitin synthase 1 OS=Cryptococcus neoformans var. grubii serotype A (strain H99 / ATCC 208821 / CBS 10515 / FGSC 9487) GN=CHS1 PE=3 SV=2 | 255 | 422 | 1.0E-07 |
| sp|P30588|CHS3_NEUCR | Chitin synthase 3 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=chs-3 PE=3 SV=2 | 274 | 514 | 2.0E-07 |
| sp|P30583|CHSC_EMENI | Chitin synthase C OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=chsC PE=3 SV=3 | 307 | 483 | 6.0E-07 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 14 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 20 | 41 | 21 |
| 2 | 54 | 76 | 22 |
| 3 | 98 | 120 | 22 |
| 4 | 453 | 470 | 17 |
| 5 | 480 | 502 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophio5|824 MAAIHEWPVKDIVYTSVVGVLMLMACLEWFLWLAAFGYCLLKVFRKAEHWSIRLLCVGVGIAFALLRFIFLPIMV VTLPLPNQVSRHWPTAAVSFLQWFAFWSFAILLTVPWLFCIYQLVTNQLGRTKRIKRVLDDATAPKVVVVMPCYR EELDVLVKAINSVVDCDYPPACIHVFLSFDGEQVDDLYLNTVEMLGVPLFTDAAYPRSIDVTYRAARITISRFPH GGKRHCQKSTFKLIDKVYAQYLKRNDNLFILFIDSDCILDKVCLQNFVYDMELSPGNARDMLAMTGVITSTTRKH SVITLLQDMEYIHGQLFERTVESGCGSVTCLPGALTMLRFSAFRRMAKYYFADKAEQCDDLFDFAKCHLGEDRWL THLFMIGAKKRHQIQMCTSAFCKTEAVQTYRSLVKQRRRWFLGFVTNEVCMLTDWRLWKRYPTLIVVRFMQNTIR TTALLFFIMVLALLTTVVKVDNLPLRRFKVWLYPLMFVLNPFFNWYYMVYGIFTAGQRTWGGPRADAAAADSNTT AQEAVERAEMQGDELNVVPESFKPAQEARRAVSKARSRVSVLNRQRSVVRPPDNIDGKFSARQRMATGIYAHPDE TSAMVGEMPTKRLDSWNGDWRDSLESFESGRSDCKASSAAVKVDVFMGDEDRRKYLIAHYAQMQRKL |
| Coding | >Ophio5|824 ATGGCCGCCATACACGAATGGCCGGTCAAGGACATCGTCTACACCTCTGTTGTTGGGGTGTTGATGCTCATGGCC TGTCTCGAGTGGTTCCTTTGGCTCGCGGCCTTTGGCTACTGCCTTCTCAAGGTCTTTCGAAAAGCCGAGCACTGG TCCATCCGTCTCCTCTGCGTTGGCGTGGGCATTGCGTTCGCCTTGCTCCGCTTCATCTTTCTACCGATCATGGTG GTGACGCTGCCGCTTCCGAATCAGGTTTCGCGGCACTGGCCCACGGCCGCTGTGTCCTTTTTGCAATGGTTCGCT TTTTGGAGTTTTGCAATCCTGCTCACCGTGCCCTGGCTATTCTGCATCTACCAGCTTGTCACCAACCAACTTGGC CGCACTAAGCGCATTAAGCGGGTGCTCGACGATGCGACTGCCCCAAAGGTGGTCGTTGTCATGCCTTGCTACCGT GAAGAGCTCGATGTGCTGGTCAAAGCCATCAACTCGGTCGTCGACTGTGACTACCCGCCGGCCTGCATCCACGTC TTTCTGTCCTTCGACGGTGAGCAGGTGGACGACCTCTATCTCAACACCGTCGAGATGTTGGGAGTGCCTCTTTTC ACAGACGCCGCATACCCCAGGAGCATCGATGTTACGTACAGGGCGGCCCGCATCACCATATCCCGCTTCCCCCAC GGCGGCAAGCGGCACTGCCAAAAGTCCACCTTCAAGCTCATCGACAAGGTGTATGCGCAGTATTTGAAGAGAAAC GACAATCTTTTCATTCTCTTCATCGACTCGGACTGCATACTGGACAAGGTCTGTTTGCAGAACTTTGTGTACGAT ATGGAGCTCAGCCCGGGAAATGCCAGGGACATGCTGGCAATGACAGGCGTCATCACGTCGACGACTCGGAAGCAT AGTGTTATTACGCTCCTCCAAGACATGGAGTACATCCATGGGCAGCTTTTCGAGCGCACCGTTGAGTCAGGCTGC GGATCGGTCACTTGCCTGCCAGGCGCGCTTACTATGCTTCGCTTCTCGGCCTTTAGGAGGATGGCCAAGTATTAC TTTGCGGATAAGGCGGAGCAGTGCGACGATCTTTTCGACTTCGCCAAATGCCACTTGGGCGAGGACCGGTGGCTC ACACATCTGTTCATGATTGGCGCAAAGAAACGGCATCAAATTCAGATGTGCACGTCGGCCTTTTGCAAAACCGAG GCCGTGCAGACTTATCGTTCCTTGGTTAAGCAGCGGCGCCGATGGTTCCTTGGCTTCGTCACTAACGAGGTCTGC ATGTTGACCGACTGGCGACTGTGGAAGCGTTATCCGACCTTGATCGTCGTGCGCTTCATGCAGAACACCATCCGC ACCACGGCCCTGCTTTTCTTCATCATGGTCCTGGCTCTTCTGACAACTGTAGTCAAGGTCGACAACCTCCCACTG CGCCGCTTTAAAGTCTGGCTGTATCCACTAATGTTCGTCTTAAACCCCTTTTTCAACTGGTACTACATGGTTTAC GGCATTTTTACCGCGGGCCAGAGAACATGGGGCGGTCCACGGGCCGATGCTGCGGCAGCCGACAGTAACACGACG GCACAGGAGGCCGTGGAGCGAGCCGAAATGCAAGGTGATGAGCTCAACGTGGTGCCCGAGTCCTTCAAGCCGGCA CAAGAGGCGCGGAGAGCCGTAAGCAAAGCACGATCGCGAGTATCGGTGCTCAACCGGCAGAGGAGTGTGGTCAGG CCTCCGGACAATATTGACGGTAAGTTCTCGGCTAGACAGAGAATGGCGACTGGCATCTACGCGCATCCCGACGAA ACCTCGGCAATGGTTGGTGAAATGCCCACTAAAAGGTTGGACAGTTGGAATGGCGACTGGCGTGATTCACTGGAA AGCTTTGAGTCGGGTCGCTCAGACTGCAAGGCTTCATCCGCTGCAGTGAAGGTAGATGTATTTATGGGAGACGAA GATCGTCGCAAATATCTAATAGCACATTATGCTCAGATGCAGCGCAAGTTA |
| Transcript | >Ophio5|824 ATGGCCGCCATACACGAATGGCCGGTCAAGGACATCGTCTACACCTCTGTTGTTGGGGTGTTGATGCTCATGGCC TGTCTCGAGTGGTTCCTTTGGCTCGCGGCCTTTGGCTACTGCCTTCTCAAGGTCTTTCGAAAAGCCGAGCACTGG TCCATCCGTCTCCTCTGCGTTGGCGTGGGCATTGCGTTCGCCTTGCTCCGCTTCATCTTTCTACCGATCATGGTG GTGACGCTGCCGCTTCCGAATCAGGTTTCGCGGCACTGGCCCACGGCCGCTGTGTCCTTTTTGCAATGGTTCGCT TTTTGGAGTTTTGCAATCCTGCTCACCGTGCCCTGGCTATTCTGCATCTACCAGCTTGTCACCAACCAACTTGGC CGCACTAAGCGCATTAAGCGGGTGCTCGACGATGCGACTGCCCCAAAGGTGGTCGTTGTCATGCCTTGCTACCGT GAAGAGCTCGATGTGCTGGTCAAAGCCATCAACTCGGTCGTCGACTGTGACTACCCGCCGGCCTGCATCCACGTC TTTCTGTCCTTCGACGGTGAGCAGGTGGACGACCTCTATCTCAACACCGTCGAGATGTTGGGAGTGCCTCTTTTC ACAGACGCCGCATACCCCAGGAGCATCGATGTTACGTACAGGGCGGCCCGCATCACCATATCCCGCTTCCCCCAC GGCGGCAAGCGGCACTGCCAAAAGTCCACCTTCAAGCTCATCGACAAGGTGTATGCGCAGTATTTGAAGAGAAAC GACAATCTTTTCATTCTCTTCATCGACTCGGACTGCATACTGGACAAGGTCTGTTTGCAGAACTTTGTGTACGAT ATGGAGCTCAGCCCGGGAAATGCCAGGGACATGCTGGCAATGACAGGCGTCATCACGTCGACGACTCGGAAGCAT AGTGTTATTACGCTCCTCCAAGACATGGAGTACATCCATGGGCAGCTTTTCGAGCGCACCGTTGAGTCAGGCTGC GGATCGGTCACTTGCCTGCCAGGCGCGCTTACTATGCTTCGCTTCTCGGCCTTTAGGAGGATGGCCAAGTATTAC TTTGCGGATAAGGCGGAGCAGTGCGACGATCTTTTCGACTTCGCCAAATGCCACTTGGGCGAGGACCGGTGGCTC ACACATCTGTTCATGATTGGCGCAAAGAAACGGCATCAAATTCAGATGTGCACGTCGGCCTTTTGCAAAACCGAG GCCGTGCAGACTTATCGTTCCTTGGTTAAGCAGCGGCGCCGATGGTTCCTTGGCTTCGTCACTAACGAGGTCTGC ATGTTGACCGACTGGCGACTGTGGAAGCGTTATCCGACCTTGATCGTCGTGCGCTTCATGCAGAACACCATCCGC ACCACGGCCCTGCTTTTCTTCATCATGGTCCTGGCTCTTCTGACAACTGTAGTCAAGGTCGACAACCTCCCACTG CGCCGCTTTAAAGTCTGGCTGTATCCACTAATGTTCGTCTTAAACCCCTTTTTCAACTGGTACTACATGGTTTAC GGCATTTTTACCGCGGGCCAGAGAACATGGGGCGGTCCACGGGCCGATGCTGCGGCAGCCGACAGTAACACGACG GCACAGGAGGCCGTGGAGCGAGCCGAAATGCAAGGTGATGAGCTCAACGTGGTGCCCGAGTCCTTCAAGCCGGCA CAAGAGGCGCGGAGAGCCGTAAGCAAAGCACGATCGCGAGTATCGGTGCTCAACCGGCAGAGGAGTGTGGTCAGG CCTCCGGACAATATTGACGGTAAGTTCTCGGCTAGACAGAGAATGGCGACTGGCATCTACGCGCATCCCGACGAA ACCTCGGCAATGGTTGGTGAAATGCCCACTAAAAGGTTGGACAGTTGGAATGGCGACTGGCGTGATTCACTGGAA AGCTTTGAGTCGGGTCGCTCAGACTGCAAGGCTTCATCCGCTGCAGTGAAGGTAGATGTATTTATGGGAGACGAA GATCGTCGCAAATATCTAATAGCACATTATGCTCAGATGCAGCGCAAGTTATAA |
| Gene | >Ophio5|824 ATGGCCGCCATACACGAATGGCCGGTCAAGGACGTCGGTGGCCGTCTACACTCTCACCGGGTCGACGCTTACCGT TGTCGCAGATCGTCTACACCTCTGTTGTTGGGGTGTTGATGCTCATGGCCTGTCTCGAGTGGTTCCTTTGGCTCG CGGCCTTTGGCTACTGCCTTCTCAAGGTCTTTCGAAAAGCCGAGCACTGGTCCATCCGTCTCCTCTGCGTTGGCG TGGGCATTGCGTTCGCCTTGCTCCGGTATGGCTCCCGGCTCCCGGCCGGAGCAAGGCTGATAATTGCAGCTTCAT CTTTCTACCGATCATGGTGGTGACGCTGCCGCTTCCGAATCAGGTTTCGCGGCACTGGCCCACGGCCGCTGTGTC CTTTTTGCAATGGTTCGCTTTTTGGAGTTTTGCAATCCTGCTCACCGTGCCCTGGCTATTCTGCATCTACCAGCT TGTCACCAACCAACTTGGCCGCACTAAGCGCATTAAGCGGGTGCTCGACGATGCGACTGCCCCAAAGGTGGTCGT TGTCATGCCTTGCTACCGTGAAGAGCTCGATGTGCTGGTCAAAGCCATCAACTCGGTCGTCGACTGTGACTACCC GCCGGCCTGCATCCACGTCTTTCTGTCCTTCGACGGTGAGCAGGTGGACGACCTCTATCTCAACACCGTCGAGAT GTTGGGAGTGCCTCTTTTCACAGACGCCGCATACCCCAGGAGCATCGATGTTACGTACAGGGCGGCCCGCATCAC CATATCCCGCTTCCCCCACGGCGGCAAGCGGCACTGCCAAAAGTCCACCTTCAAGCTCATCGACAAGGTGTATGC GCAGTATTTGAAGAGAAACGACAATCTTTTCATTCTCTTCATCGACTCGGACTGCATACTGGACAAGGTCTGTTT GCAGAACTTTGTGTACGATATGGAGCTCAGCCCGGGAAATGCCAGGGACATGCTGGCAATGACAGGCGTCATCAC GTCGACGACTCGGAAGCATAGTGTTATTACGCTCCTCCAAGACATGGAGTACATCCATGGGCAGCTTTTCGAGCG CACCGTTGAGTCAGGCTGCGGATCGGTCACTTGCCTGCCAGGCGCGCTTACTATGCTTCGCTTCTCGGCCTTTAG GAGGATGGCCAAGTATTACTTTGCGGATAAGGCGGAGCAGTGCGACGATCTTTTCGACTTCGCCAAATGCCACTT GGGCGAGGACCGGTGGCTCACACATCTGTTCATGATTGGCGCAAAGAAACGGCATCAAATTCAGATGTGCACGTC GGCCTTTTGCAAAACCGAGGCCGTGCAGACTTATCGTTCCTTGGTTAAGCAGCGGCGCCGATGGTTCCTTGGCTT CGTCACTAACGAGGTCTGCATGTTGACCGACTGGCGACTGTGGAAGCGTTATCCGACCTTGATCGTCGTGCGCTT CATGCAGAACACCATCCGCACCACGGCCCTGCTTTTCTTCATCATGGTCCTGGCTCTTCTGACAACTGTAGTCAA GGTCGACAACCTCCCAGTAGGTTTCATTGCCGTTTCACTCGGCCTCAACTGGCTCCTGATGCTATACTTTGGCGC CAAGCTGCGCCGCTTTAAAGTCTGGCTGTATCCACTAATGTTCGTCTTAAACCCCTTTTTCAACTGGTACTACAT GGTTTACGGCATTTTTACCGCGGGCCAGAGAACATGGGGCGGTCCACGGGCCGATGCTGCGGCAGCCGACAGTAA CACGACGGCACAGGAGGCCGTGGAGCGAGCCGAAATGCAAGGTGATGAGCTCAACGTGGTGCCCGAGTCCTTCAA GCCGGCACAAGAGGCGCGGAGAGCCGTAAGCAAAGCACGATCGCGAGTATCGGTGCTCAACCGGCAGAGGAGTGT GGTCAGGCCTCCGGACAATATTGACGGTAAGTTCTCGGCTAGACAGAGAATGGCGACTGGCATCTACGCGCATCC CGACGAAACCTCGGCAATGGTTGGTGAAATGCCCACTAAAAGGTTGGACAGTTGGAATGGCGACTGGCGTGATTC ACTGGAAAGCTTTGAGTCGGGTCGCTCAGACTGCAAGGCTTCATCCGCTGCAGTGAAGGTAGATGTATTTATGGG AGACGAAGATCGTCGCAAATATCTAATAGCACATTATGCTCAGATGCAGCGCAAGTTATAA |