Protein ID | Ophio5|8232 |
Gene name | |
Location | scaffold_89:39160..39664 |
Strand | - |
Gene length (bp) | 504 |
Transcript length (bp) | 216 |
Coding sequence length (bp) | 213 |
Protein length (aa) | 71 |
Localizations | Signals | Cytoplasm | Nucleus | Extracellular | Cell membrane | Mitochondrion | Plastid | Endoplasmic reticulum | Lysosome vacuole | Golgi apparatus | Peroxisome |
---|---|---|---|---|---|---|---|---|---|---|---|
Cytoplasm | 0.52 | 0.4497 | 0.2572 | 0.0768 | 0.2405 | 0.2533 | 0.3193 | 0.3069 | 0.2187 | 0.0548 |
Orthofinder run ID | 4 |
Orthogroup | 16413 |
Change Orthofinder run |
Species | Protein ID |
---|---|
Ophiocordyceps kimflemingae | Ophio5|8232 (this protein) |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophio5|8232 MLYFSLPLALRSFFLALSLSLSFSLSPSPSLPDSNKHRSVYGLTRSSTPLLPPHPLLPQPQPRSPDISSDG |
Coding | >Ophio5|8232 ATGTTATATTTCTCTCTCCCCTTGGCCCTCCGAAGTTTTTTCCTCGCTCTCTCTCTTTCTCTCTCTTTCTCTCTC TCCCCCTCTCCTTCACTGCCAGACTCCAACAAGCACCGCTCTGTCTACGGACTCACCCGCTCTTCTACGCCTCTT CTTCCACCTCATCCGTTACTGCCGCAGCCGCAGCCGCGCTCCCCCGACATCAGTTCCGACGGC |
Transcript | >Ophio5|8232 ATGTTATATTTCTCTCTCCCCTTGGCCCTCCGAAGTTTTTTCCTCGCTCTCTCTCTTTCTCTCTCTTTCTCTCTC TCCCCCTCTCCTTCACTGCCAGACTCCAACAAGCACCGCTCTGTCTACGGACTCACCCGCTCTTCTACGCCTCTT CTTCCACCTCATCCGTTACTGCCGCAGCCGCAGCCGCGCTCCCCCGACATCAGTTCCGACGGCTGA |
Gene | >Ophio5|8232 ATGTTATATTTCTCTCTCCCCTTGGCCCTCCGAAGTTTTTTCCTCGCTCTCTCTCTTTCTCTCTCTTTCTCTCTC TCCCCCTCTCCTTCACTGCCAGACTCCAACAAGCACCGCTCTGTCTACGGACTCACCCGCTCTTCTGTTTGTGCT CTGTACTCACCTGCTCCGTCTCTTCCTTGCTGACGACGGTCGCGTGAATCGCAGACGCCTCTTCTTCCACCTCAT CCGTTACTGCCGCAGCCGCAGCCGCGCTCGTGTTTCCGCCCCTTCTGTCGACTCGAAGCCTCTTCCCTTCATCGG CACTCAGGCCACCGTCCGCTTCGTCTACCTCGACTGTTTTTCCTCGGGAGGGAAAGAAAAACGTCTGCACTTAGG GTCTCTTGGCGCACATTTCTGTTTATGTATCAGCACGATCAGCTCACCGTGTGCACACACTTCTTCAACCTGCAT TTCTTTCGCATATCGCGAAGGCCGTGTAGCCCCGACATCAGTTCCGACGGCTGA |