© 2022 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Ophio5|8227 |
| Gene name | |
| Location | scaffold_89:25746..26610 |
| Strand | - |
| Gene length (bp) | 864 |
| Transcript length (bp) | 729 |
| Coding sequence length (bp) | 726 |
| Protein length (aa) | 242 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF13489 | Methyltransf_23 | Methyltransferase domain | 6.6E-08 | 58 | 140 |
| PF13847 | Methyltransf_31 | Methyltransferase domain | 2.8E-07 | 72 | 188 |
| PF13649 | Methyltransf_25 | Methyltransferase domain | 4.2E-07 | 75 | 174 |
| PF08241 | Methyltransf_11 | Methyltransferase domain | 3.1E-06 | 75 | 141 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P40516|EFM4_YEAST | Protein-lysine N-methyltransferase EFM4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=EFM4 PE=1 SV=1 | 9 | 241 | 3.0E-38 |
| sp|Q9P7Z3|EFM4_SCHPO | Protein-lysine N-methyltransferase efm4 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=see1 PE=2 SV=1 | 11 | 240 | 1.0E-28 |
| sp|Q5D013|MET10_DANRE | Protein-lysine N-methyltransferase mettl10 OS=Danio rerio GN=mettl10 PE=2 SV=1 | 5 | 241 | 2.0E-27 |
| sp|Q9D853|MET10_MOUSE | Protein-lysine N-methyltransferase Mettl10 OS=Mus musculus GN=Mettl10 PE=1 SV=1 | 13 | 241 | 2.0E-22 |
| sp|Q5JPI9|MET10_HUMAN | Protein-lysine N-methyltransferase METTL10 OS=Homo sapiens GN=METTL10 PE=1 SV=2 | 13 | 194 | 3.0E-20 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0008168 | methyltransferase activity | Yes |
| GO:0003824 | catalytic activity | No |
| GO:0016740 | transferase activity | No |
| GO:0003674 | molecular_function | No |
| GO:0016741 | transferase activity, transferring one-carbon groups | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 66 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophio5|8227 MTSEGDAPAPLSPSELGTKEYWDGLYARELDNHAACPSDTGTDWFSETEASTKMAELAEEDDEAGGEKKQRAALL DLGCGNGSLLRSFRTEGWKGRALGVDYSPHSIALSRRVGEADAVEWAVMGWDVVLDKGTFDAVSLARPPASDESG GEEIAPRPCAAYVDRVRRLTRPRGGIFIITSCNWTEDELIRWFAGRVPRGSQGGGDDEDEARFEVAGTARYRSFS FGGHKGQAVSTVCFRRL |
| Coding | >Ophio5|8227 ATGACGTCCGAAGGGGACGCACCCGCTCCTCTCTCACCATCCGAACTCGGTACAAAAGAGTACTGGGATGGCCTC TACGCCCGCGAGCTAGATAATCACGCCGCCTGCCCGAGCGACACGGGCACAGACTGGTTCTCGGAAACGGAGGCG TCGACCAAGATGGCCGAGCTCGCCGAAGAAGATGACGAGGCAGGGGGGGAAAAAAAGCAGAGGGCGGCGCTGCTG GATCTCGGTTGCGGAAACGGCTCGCTGCTCCGGTCCTTCCGGACAGAGGGCTGGAAAGGTCGGGCGCTGGGGGTC GATTATAGCCCTCATAGCATCGCCCTCTCTCGTCGTGTCGGAGAAGCGGATGCGGTCGAGTGGGCTGTCATGGGA TGGGACGTCGTGCTTGACAAGGGCACTTTTGACGCTGTGAGCTTGGCTCGCCCCCCTGCTTCGGACGAGAGTGGT GGTGAGGAGATTGCGCCCCGACCATGTGCTGCCTATGTCGATCGCGTTCGGCGCCTCACTCGCCCCCGCGGCGGC ATCTTCATCATCACCAGCTGCAACTGGACAGAAGACGAGCTGATTCGCTGGTTCGCCGGCCGCGTCCCCCGCGGA AGCCAAGGCGGCGGCGACGACGAGGACGAGGCTCGCTTCGAGGTCGCCGGCACCGCCCGCTACCGCTCCTTCAGC TTCGGCGGCCACAAGGGCCAGGCCGTCAGCACCGTGTGCTTCCGGAGGCTG |
| Transcript | >Ophio5|8227 ATGACGTCCGAAGGGGACGCACCCGCTCCTCTCTCACCATCCGAACTCGGTACAAAAGAGTACTGGGATGGCCTC TACGCCCGCGAGCTAGATAATCACGCCGCCTGCCCGAGCGACACGGGCACAGACTGGTTCTCGGAAACGGAGGCG TCGACCAAGATGGCCGAGCTCGCCGAAGAAGATGACGAGGCAGGGGGGGAAAAAAAGCAGAGGGCGGCGCTGCTG GATCTCGGTTGCGGAAACGGCTCGCTGCTCCGGTCCTTCCGGACAGAGGGCTGGAAAGGTCGGGCGCTGGGGGTC GATTATAGCCCTCATAGCATCGCCCTCTCTCGTCGTGTCGGAGAAGCGGATGCGGTCGAGTGGGCTGTCATGGGA TGGGACGTCGTGCTTGACAAGGGCACTTTTGACGCTGTGAGCTTGGCTCGCCCCCCTGCTTCGGACGAGAGTGGT GGTGAGGAGATTGCGCCCCGACCATGTGCTGCCTATGTCGATCGCGTTCGGCGCCTCACTCGCCCCCGCGGCGGC ATCTTCATCATCACCAGCTGCAACTGGACAGAAGACGAGCTGATTCGCTGGTTCGCCGGCCGCGTCCCCCGCGGA AGCCAAGGCGGCGGCGACGACGAGGACGAGGCTCGCTTCGAGGTCGCCGGCACCGCCCGCTACCGCTCCTTCAGC TTCGGCGGCCACAAGGGCCAGGCCGTCAGCACCGTGTGCTTCCGGAGGCTGTGA |
| Gene | >Ophio5|8227 ATGACGTCCGAAGGGGACGCACCCGCTCCTCTCTCACCATCCGAACTCGGTACAAAAGAGTAGTAGGTTGACAAG AAAAAACGGTCACGGACATGCCCTCCCCCCCCCAAAAAAAAAGACACGCCCAACTGACTTGGGACACAAAGCTGG GATGGCCTCTACGCCCGCGAGCTAGATAATCACGCCGCCTGCCCGAGCGACACGGGCACAGACTGGTTCTCGGAA ACGGAGGCGTCGACCAAGATGGCCGAGCTCGCCGAAGAAGATGACGAGGCAGGGGGGGAAAAAAAGCAGAGGGCG GCGCTGCTGGATCTCGGTTGCGGAAACGGCTCGCTGCTCCGGTCCTTCCGGACAGAGGGCTGGAAAGGTCGGGCG CTGGGGGTCGATTATAGCCCTCATAGCATCGCCCTCTCTCGTCGTGTCGGAGAAGCGGATGCGGTCGAGTGGGCT GTCTGGGATGTCGTTGCTGGGTCGCTGGACGTGGTTCTGACGAATGAGCAGGTCATGGGATGGGACGTCGTGCTT GACAAGGGCACTTTTGACGCTGTGAGCTTGGCTCGCCCCCCTGCTTCGGACGAGAGTGGTGGTGAGGAGATTGCG CCCCGACCATGTGCTGCCTATGTCGATCGCGTTCGGCGCCTCACTCGCCCCCGCGGCGGCATCTTCATCATCACC AGCTGCAACTGGACAGAAGACGAGCTGATTCGCTGGTTCGCCGGCCGCGTCCCCCGCGGAAGCCAAGGCGGCGGC GACGACGAGGACGAGGCTCGCTTCGAGGTCGCCGGCACCGCCCGCTACCGCTCCTTCAGCTTCGGCGGCCACAAG GGCCAGGCCGTCAGCACCGTGTGCTTCCGGAGGCTGTGA |