Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|8222
Gene name
Locationscaffold_89:12748..14342
Strand+
Gene length (bp)1594
Transcript length (bp)1209
Coding sequence length (bp)1206
Protein length (aa) 402

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF05653 Mg_trans_NIPA Magnesium transporter NIPA 6.2E-100 4 293

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q94AH3|NIPA4_ARATH Probable magnesium transporter NIPA4 OS=Arabidopsis thaliana GN=At1g71900 PE=2 SV=1 1 322 2.0E-93
sp|Q9LNK7|NIPA3_ARATH Probable magnesium transporter NIPA3 OS=Arabidopsis thaliana GN=At1g34470 PE=2 SV=1 1 293 5.0E-92
sp|F4JKQ7|NIPA5_ARATH Probable magnesium transporter NIPA5 OS=Arabidopsis thaliana GN=At4g09640 PE=2 SV=1 1 290 3.0E-87
sp|Q8GYS1|NIPA7_ARATH Probable magnesium transporter NIPA7 OS=Arabidopsis thaliana GN=At4g38730 PE=2 SV=1 1 298 2.0E-86
sp|Q8GWX2|NIPA6_ARATH Probable magnesium transporter NIPA6 OS=Arabidopsis thaliana GN=At2g21120 PE=2 SV=1 1 311 2.0E-86
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Swissprot ID Swissprot Description Start End E-value
sp|Q94AH3|NIPA4_ARATH Probable magnesium transporter NIPA4 OS=Arabidopsis thaliana GN=At1g71900 PE=2 SV=1 1 322 2.0E-93
sp|Q9LNK7|NIPA3_ARATH Probable magnesium transporter NIPA3 OS=Arabidopsis thaliana GN=At1g34470 PE=2 SV=1 1 293 5.0E-92
sp|F4JKQ7|NIPA5_ARATH Probable magnesium transporter NIPA5 OS=Arabidopsis thaliana GN=At4g09640 PE=2 SV=1 1 290 3.0E-87
sp|Q8GYS1|NIPA7_ARATH Probable magnesium transporter NIPA7 OS=Arabidopsis thaliana GN=At4g38730 PE=2 SV=1 1 298 2.0E-86
sp|Q8GWX2|NIPA6_ARATH Probable magnesium transporter NIPA6 OS=Arabidopsis thaliana GN=At2g21120 PE=2 SV=1 1 311 2.0E-86
sp|B3LFA3|NIPA2_ARATH Probable magnesium transporter NIPA2 OS=Arabidopsis thaliana GN=At4g13800 PE=2 SV=1 1 298 9.0E-82
sp|Q5R7Q3|NIPA2_PONAB Magnesium transporter NIPA2 OS=Pongo abelii GN=NIPA2 PE=2 SV=1 4 290 8.0E-81
sp|Q8N8Q9|NIPA2_HUMAN Magnesium transporter NIPA2 OS=Homo sapiens GN=NIPA2 PE=2 SV=1 4 290 8.0E-81
sp|Q3SWX0|NIPA2_BOVIN Magnesium transporter NIPA2 OS=Bos taurus GN=NIPA2 PE=2 SV=1 4 290 3.0E-80
sp|Q9JJC8|NIPA2_MOUSE Magnesium transporter NIPA2 OS=Mus musculus GN=Nipa2 PE=1 SV=1 4 290 4.0E-80
sp|Q9LIR9|NIPA1_ARATH Probable magnesium transporter NIPA1 OS=Arabidopsis thaliana GN=At3g23870 PE=2 SV=1 43 313 2.0E-79
sp|Q8BZF2|NIPA4_MOUSE Magnesium transporter NIPA4 OS=Mus musculus GN=Nipal4 PE=1 SV=1 6 305 6.0E-75
sp|Q0D2K0|NIPA4_HUMAN Magnesium transporter NIPA4 OS=Homo sapiens GN=NIPAL4 PE=1 SV=3 6 290 2.0E-70
sp|Q8BMW7|NIPA3_MOUSE Magnesium transporter NIPA3 OS=Mus musculus GN=Nipal1 PE=1 SV=2 2 290 1.0E-58
sp|Q7RTP0|NIPA1_HUMAN Magnesium transporter NIPA1 OS=Homo sapiens GN=NIPA1 PE=1 SV=1 7 293 2.0E-54
sp|Q8BHK1|NIPA1_MOUSE Magnesium transporter NIPA1 OS=Mus musculus GN=Nipa1 PE=1 SV=1 7 293 5.0E-54
sp|Q5RDB8|NIPA3_PONAB Magnesium transporter NIPA3 OS=Pongo abelii GN=NIPAL1 PE=2 SV=1 2 290 1.0E-53
sp|Q6NVV3|NIPA3_HUMAN Magnesium transporter NIPA3 OS=Homo sapiens GN=NIPAL1 PE=2 SV=1 2 290 8.0E-53
sp|Q9H841|NPAL2_HUMAN NIPA-like protein 2 OS=Homo sapiens GN=NIPAL2 PE=2 SV=1 8 313 2.0E-27
sp|Q6P499|NPAL3_HUMAN NIPA-like protein 3 OS=Homo sapiens GN=NIPAL3 PE=1 SV=1 3 313 8.0E-27
sp|Q5RD30|NPAL3_PONAB NIPA-like protein 3 OS=Pongo abelii GN=NIPAL3 PE=2 SV=1 3 313 1.0E-25
sp|Q91WC7|NPAL2_MOUSE NIPA-like protein 2 OS=Mus musculus GN=Nipal2 PE=2 SV=1 8 295 7.0E-23
sp|Q8BGN5|NPAL3_MOUSE NIPA-like protein 3 OS=Mus musculus GN=Nipal3 PE=2 SV=1 3 313 8.0E-23
sp|Q8RWF4|NIPA8_ARATH Probable magnesium transporter NIPA8 OS=Arabidopsis thaliana GN=At3g26670 PE=2 SV=1 47 344 4.0E-11
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GO

GO Term Description Terminal node
GO:0015095 magnesium ion transmembrane transporter activity Yes
GO:0016021 integral component of membrane Yes
GO:0015693 magnesium ion transport Yes
GO:0110165 cellular anatomical entity No
GO:0008150 biological_process No
GO:0031224 intrinsic component of membrane No
GO:0051234 establishment of localization No
GO:0006810 transport No
GO:0051179 localization No
GO:0003674 molecular_function No
GO:0005215 transporter activity No
GO:0022890 inorganic cation transmembrane transporter activity No
GO:0015075 ion transmembrane transporter activity No
GO:0022857 transmembrane transporter activity No
GO:0030001 metal ion transport No
GO:0005575 cellular_component No
GO:0046873 metal ion transmembrane transporter activity No
GO:0008324 cation transmembrane transporter activity No
GO:0006811 ion transport No
GO:0006812 cation transport No
GO:0015318 inorganic molecular entity transmembrane transporter activity No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 19 0.5

Transmembrane Domains

Domain # Start End Length
1 7 26 19
2 75 97 22
3 104 123 19
4 138 160 22
5 173 195 22
6 210 229 19
7 242 264 22
8 269 291 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|8222
MIEDKYIGLALAMSSALAIGTSFVITKKGLLDAEQRHGFEGDGFVYLRSPVWWAGIATLVIGEVCNFAAYAFAPA
ILVTPLGALSVLIGAVLGSYFLEEELGTLGKLGSAICLIGAVVIVLHAPPDEDIQTIDQILHYAIQPGFLLYAVA
VIAFAAFMIYKIAPVYGKKNALIYLSICSTVGSISVMSVKAFGIALKLSLAGNNQFSHPSTYVFMILTTVCILIQ
MNYFNKALASFPTYIVNPLYYVTFTTATLCASFILFSGFNTTDAVNTLSLLCGFLVTFTGVYLLNLSRSDPNAHN
VPAGHIMAHDSTPTDMVSSLQTRRSMQSRRSGDHARHSVSSLHGDREGLIRAYDEEEAAGFGLTDLAEESEDDSQ
KSNSRLNGKKEVNSGDIELEDRKSAER
Coding >Ophio5|8222
ATGATCGAAGACAAGTACATCGGCCTAGCGCTGGCCATGTCCTCGGCTCTCGCTATCGGCACCAGTTTCGTCATC
ACGAAAAAGGGATTGCTAGACGCCGAGCAACGACACGGCTTCGAGGGCGACGGTTTTGTCTACCTGAGGAGTCCC
GTGTGGTGGGCTGGCATCGCCACACTCGTCATCGGAGAAGTTTGCAACTTCGCCGCCTACGCGTTCGCACCAGCC
ATTCTCGTCACGCCTCTCGGGGCGCTTAGTGTTCTCATCGGCGCCGTCCTCGGCTCCTACTTTCTCGAGGAGGAG
CTGGGGACCCTGGGCAAGCTGGGGAGTGCCATCTGCCTCATCGGCGCCGTCGTTATCGTCCTCCACGCGCCCCCC
GACGAAGACATTCAGACTATTGATCAAATCTTGCACTACGCCATCCAGCCAGGTTTCCTGCTCTACGCCGTTGCC
GTCATTGCCTTTGCGGCCTTTATGATCTACAAGATCGCGCCTGTCTATGGCAAGAAGAACGCCCTCATCTACCTT
TCCATTTGTTCGACCGTCGGCTCCATCTCCGTCATGTCTGTCAAGGCTTTTGGTATCGCCCTCAAGCTCTCCCTG
GCCGGCAACAACCAGTTTTCTCACCCGTCCACCTACGTCTTCATGATATTGACCACCGTCTGCATTCTCATTCAG
ATGAACTACTTCAATAAGGCGCTGGCGTCCTTTCCTACCTATATTGTCAACCCCCTGTACTACGTGACCTTTACG
ACGGCCACCCTGTGTGCGTCCTTCATCCTCTTCAGCGGCTTCAACACCACCGACGCCGTCAACACCCTGTCGTTG
CTCTGCGGCTTCCTCGTCACCTTTACCGGTGTCTACTTGCTCAACCTGTCAAGAAGCGATCCAAACGCGCACAAC
GTCCCTGCAGGACACATTATGGCCCACGACTCGACGCCGACCGATATGGTGTCCAGTTTGCAGACTCGCCGCAGC
ATGCAATCTCGTCGCAGCGGCGATCACGCACGGCACAGCGTGAGCAGTCTGCATGGCGACAGGGAAGGCCTGATC
CGGGCATACGACGAGGAGGAGGCTGCGGGTTTCGGCCTCACTGACCTGGCGGAGGAGAGCGAAGACGATTCGCAG
AAATCAAACAGCCGCTTGAACGGCAAGAAAGAGGTCAACTCGGGCGACATCGAGCTGGAGGACCGGAAATCTGCT
GAGAGG
Transcript >Ophio5|8222
ATGATCGAAGACAAGTACATCGGCCTAGCGCTGGCCATGTCCTCGGCTCTCGCTATCGGCACCAGTTTCGTCATC
ACGAAAAAGGGATTGCTAGACGCCGAGCAACGACACGGCTTCGAGGGCGACGGTTTTGTCTACCTGAGGAGTCCC
GTGTGGTGGGCTGGCATCGCCACACTCGTCATCGGAGAAGTTTGCAACTTCGCCGCCTACGCGTTCGCACCAGCC
ATTCTCGTCACGCCTCTCGGGGCGCTTAGTGTTCTCATCGGCGCCGTCCTCGGCTCCTACTTTCTCGAGGAGGAG
CTGGGGACCCTGGGCAAGCTGGGGAGTGCCATCTGCCTCATCGGCGCCGTCGTTATCGTCCTCCACGCGCCCCCC
GACGAAGACATTCAGACTATTGATCAAATCTTGCACTACGCCATCCAGCCAGGTTTCCTGCTCTACGCCGTTGCC
GTCATTGCCTTTGCGGCCTTTATGATCTACAAGATCGCGCCTGTCTATGGCAAGAAGAACGCCCTCATCTACCTT
TCCATTTGTTCGACCGTCGGCTCCATCTCCGTCATGTCTGTCAAGGCTTTTGGTATCGCCCTCAAGCTCTCCCTG
GCCGGCAACAACCAGTTTTCTCACCCGTCCACCTACGTCTTCATGATATTGACCACCGTCTGCATTCTCATTCAG
ATGAACTACTTCAATAAGGCGCTGGCGTCCTTTCCTACCTATATTGTCAACCCCCTGTACTACGTGACCTTTACG
ACGGCCACCCTGTGTGCGTCCTTCATCCTCTTCAGCGGCTTCAACACCACCGACGCCGTCAACACCCTGTCGTTG
CTCTGCGGCTTCCTCGTCACCTTTACCGGTGTCTACTTGCTCAACCTGTCAAGAAGCGATCCAAACGCGCACAAC
GTCCCTGCAGGACACATTATGGCCCACGACTCGACGCCGACCGATATGGTGTCCAGTTTGCAGACTCGCCGCAGC
ATGCAATCTCGTCGCAGCGGCGATCACGCACGGCACAGCGTGAGCAGTCTGCATGGCGACAGGGAAGGCCTGATC
CGGGCATACGACGAGGAGGAGGCTGCGGGTTTCGGCCTCACTGACCTGGCGGAGGAGAGCGAAGACGATTCGCAG
AAATCAAACAGCCGCTTGAACGGCAAGAAAGAGGTCAACTCGGGCGACATCGAGCTGGAGGACCGGAAATCTGCT
GAGAGGTAG
Gene >Ophio5|8222
ATGATCGAAGACAAGTACGTCGCGCCTCCCGCTTCTTTCCATCACGACTCGATGCGCCGCGTGGACGGGACGCCT
CCTTGCTGACCAGCCTCTTCTTCCAGGTACATCGGCCTAGCGCTGGCCATGTCCTCGGCTCTCGCTATCGGTAAG
ATAGATGATTACTCGCCGCTGCCCTGTGCGCACCTCTTTTGCTAACAAGGCCTTTCAGGCACCAGTTTCGTCATC
ACGAAAAAGGTTCGTCGCTGCCGCCTTGCCTCACATTCTCACGTCCCTCCGACCGTCCCCATCGCGATTCTAACA
TGTGGCTTTAGGGATTGCTAGACGCCGAGCAACGACACGGCTTCGAGGGCGACGGTTTTGTCTACCTGAGGAGTC
CCGTGTGGTGGGCTGGCATCGCCACACGTGAGTATCTTCGTCTTGTTGTCGATACTGTCGGGCTGACATTTCCTG
TCCATCTAGTCGTCATCGGAGAAGTTTGCAACTTCGCCGCCTACGCGTTCGCACCAGCCATTCTCGTCACGCCTC
TCGGGGCGCTTAGTGTTCTCATCGGCGCCGTCCTCGGCTCCTACTTTCTCGAGGAGGAGCTGGGGACCCTGGGCA
AGCTGGGGAGTGCCATCTGCCTCATCGGCGCCGTCGTTATCGTCCTCCACGCGCCCCCCGACGAAGACATTCAGA
CTATTGATCAAATCTTGCACTACGCCATCCAGCCAGGTACGAGCCCTGTTCGTGTCGCGCCGATTGGTCTGACCA
GTCCATAGGTTTCCTGCTCTACGCCGTTGCCGTCATTGCCTTTGCGGCCTTTATGATCTACAAGATCGCGCCTGT
CTATGGCAAGAAGAACGCCCTCATCTACCTTTCCATTTGTTCGACCGTCGGCTCCATCTCCGTCATGTCTGTCAA
GGCTTTTGGTATCGCCCTCAAGCTCTCCCTGGCCGGCAACAACCAGTTTTCTCACCCGTCCACCTACGTCTTCAT
GATATTGACCACCGTCTGCATTCTCATTCAGATGAACTACTTCAATAAGGCGCTGGCGTCCTTTCCTACCTATAT
GTCAGTCTCTCTCTCTCTCTACCGTTCGCGGCTTTGGACGCTGACTCTCCGAAGTGTCAACCCCCTGTACTACGT
GACCTTTACGACGGCCACCCTGTGTGCGTCCTTCATCCTCTTCAGCGGCTTCAACACCACCGACGCCGTCAACAC
CCTGTCGTTGCTCTGCGGCTTCCTCGTCACCTTTACCGGTGTCTACTTGCTCAACCTGTCAAGAAGCGATCCAAA
CGCGCACAACGTCCCTGCAGGACACATTATGGCCCACGACTCGACGCCGACCGATATGGTGTCCAGTTTGCAGAC
TCGCCGCAGCATGCAATCTCGTCGCAGCGGCGATCACGCACGGCACAGCGTGAGCAGTCTGCATGGCGACAGGGA
AGGCCTGATCCGGGCATACGACGAGGAGGAGGCTGCGGGTTTCGGCCTCACTGACCTGGCGGAGGAGAGCGAAGA
CGATTCGCAGAAATCAAACAGCCGCTTGAACGGCAAGAAAGAGGTCAACTCGGGCGACATCGAGCTGGAGGACCG
GAAATCTGCTGAGAGGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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