Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|8176
Gene name
Locationscaffold_878:4234..5484
Strand+
Gene length (bp)1250
Transcript length (bp)1194
Coding sequence length (bp)1191
Protein length (aa) 397

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 23 0.5

Transmembrane Domains

Domain # Start End Length
1 59 78 19

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|8176
MSPVDVAMVGGGLLQQTKRALGLARRDILIDAADRVGDVRSAFSSWDNCMKHSYCKWPVIAVIVVGSLILFSLVW
CIIRRLCCGLACCCSCCQCLRCCGNCCGCCDAPNRRQHKYLEEPYIPPGHGYQTQPPMQAPFASGATPPQYAQFD
MPRKGGEDALPEMPSWESGSSKRVMVENDEVEMNQLNKPSSLPLAQTPATVMTPALASTPGYDHHSPASYPRDQR
GYFDQGANHAFDLAQPTPRGPSRPYNLMHQDSGDSFGRMGGGPSPYPMDARARADYGQYPSPTPAPRERADYGPT
GYSSAGYDTGYNTSYDTGYDTGYDMPTHSSPPVESWSPQNQQSSVHHSPPITNNAGFDFTSGYARPALDNQPASE
PPSTSTPVYPGYKPYQPPTQAS
Coding >Ophio5|8176
ATGTCCCCCGTTGACGTCGCCATGGTCGGCGGTGGCCTGCTGCAACAGACGAAGCGTGCTCTTGGCCTCGCCAGG
AGGGACATTCTCATCGACGCCGCTGACCGGGTCGGCGACGTCCGGTCAGCCTTCTCCAGCTGGGACAACTGCATG
AAGCACAGCTACTGCAAATGGCCCGTCATTGCCGTCATCGTCGTCGGCAGCCTCATCCTCTTTAGCCTTGTCTGG
TGCATTATCCGTCGACTCTGCTGCGGTCTCGCCTGCTGCTGCAGCTGCTGCCAGTGCCTCCGCTGTTGTGGCAAC
TGCTGCGGCTGTTGTGACGCTCCCAACCGACGCCAGCACAAATATCTCGAAGAGCCCTACATCCCCCCGGGTCAC
GGCTATCAAACCCAGCCTCCGATGCAGGCCCCCTTCGCATCCGGCGCCACACCCCCTCAGTATGCCCAGTTCGAC
ATGCCCAGAAAGGGAGGCGAGGATGCCCTACCCGAAATGCCCAGCTGGGAGTCGGGCAGCTCCAAGAGGGTCATG
GTCGAGAACGACGAGGTGGAGATGAACCAGCTGAACAAGCCTTCGTCTCTCCCTCTGGCCCAAACCCCGGCGACT
GTCATGACACCGGCGCTCGCCTCGACGCCCGGCTACGACCATCACTCTCCAGCTTCCTATCCGCGGGATCAACGC
GGATACTTTGACCAAGGCGCCAACCACGCCTTTGACCTGGCGCAGCCGACGCCCAGGGGCCCGTCCCGTCCGTAC
AACTTGATGCACCAAGACTCGGGCGACAGCTTCGGCAGGATGGGCGGCGGTCCTTCTCCGTACCCCATGGATGCG
CGGGCTCGGGCCGACTATGGCCAATATCCCAGCCCGACACCCGCGCCCCGTGAGCGGGCAGACTACGGTCCAACG
GGCTACTCGAGCGCCGGCTACGACACCGGCTACAACACCAGCTACGACACCGGCTACGACACCGGCTACGACATG
CCGACGCACTCGTCTCCGCCCGTCGAGTCTTGGTCCCCGCAGAACCAGCAGTCCAGTGTTCATCATTCGCCGCCC
ATCACCAACAACGCCGGCTTCGATTTCACATCCGGCTACGCTCGGCCCGCCCTCGACAATCAACCCGCGAGCGAA
CCCCCTTCTACCTCTACCCCGGTCTATCCCGGATACAAGCCATATCAGCCGCCGACACAGGCGAGC
Transcript >Ophio5|8176
ATGTCCCCCGTTGACGTCGCCATGGTCGGCGGTGGCCTGCTGCAACAGACGAAGCGTGCTCTTGGCCTCGCCAGG
AGGGACATTCTCATCGACGCCGCTGACCGGGTCGGCGACGTCCGGTCAGCCTTCTCCAGCTGGGACAACTGCATG
AAGCACAGCTACTGCAAATGGCCCGTCATTGCCGTCATCGTCGTCGGCAGCCTCATCCTCTTTAGCCTTGTCTGG
TGCATTATCCGTCGACTCTGCTGCGGTCTCGCCTGCTGCTGCAGCTGCTGCCAGTGCCTCCGCTGTTGTGGCAAC
TGCTGCGGCTGTTGTGACGCTCCCAACCGACGCCAGCACAAATATCTCGAAGAGCCCTACATCCCCCCGGGTCAC
GGCTATCAAACCCAGCCTCCGATGCAGGCCCCCTTCGCATCCGGCGCCACACCCCCTCAGTATGCCCAGTTCGAC
ATGCCCAGAAAGGGAGGCGAGGATGCCCTACCCGAAATGCCCAGCTGGGAGTCGGGCAGCTCCAAGAGGGTCATG
GTCGAGAACGACGAGGTGGAGATGAACCAGCTGAACAAGCCTTCGTCTCTCCCTCTGGCCCAAACCCCGGCGACT
GTCATGACACCGGCGCTCGCCTCGACGCCCGGCTACGACCATCACTCTCCAGCTTCCTATCCGCGGGATCAACGC
GGATACTTTGACCAAGGCGCCAACCACGCCTTTGACCTGGCGCAGCCGACGCCCAGGGGCCCGTCCCGTCCGTAC
AACTTGATGCACCAAGACTCGGGCGACAGCTTCGGCAGGATGGGCGGCGGTCCTTCTCCGTACCCCATGGATGCG
CGGGCTCGGGCCGACTATGGCCAATATCCCAGCCCGACACCCGCGCCCCGTGAGCGGGCAGACTACGGTCCAACG
GGCTACTCGAGCGCCGGCTACGACACCGGCTACAACACCAGCTACGACACCGGCTACGACACCGGCTACGACATG
CCGACGCACTCGTCTCCGCCCGTCGAGTCTTGGTCCCCGCAGAACCAGCAGTCCAGTGTTCATCATTCGCCGCCC
ATCACCAACAACGCCGGCTTCGATTTCACATCCGGCTACGCTCGGCCCGCCCTCGACAATCAACCCGCGAGCGAA
CCCCCTTCTACCTCTACCCCGGTCTATCCCGGATACAAGCCATATCAGCCGCCGACACAGGCGAGCTAA
Gene >Ophio5|8176
ATGTCCCCCGTTGACGTCGCCATGGTCGGCGGTGGCCTGCTGCAACAGACGAAGCGTGCTCTTGGCCTCGCCAGG
AGGGACATTCTCATCGACGCCGCTGACCGGGTCGGCGACGTCCGGTCAGCCTTCTCCAGCTGGGACAACTGCATG
AAGCACAGCTACTGCAAGTATGTGATGAAGCCGGCCTGTGTGGCTTCTTTTTCTCGACGCTAACCGCTGCCAGAT
GGCCCGTCATTGCCGTCATCGTCGTCGGCAGCCTCATCCTCTTTAGCCTTGTCTGGTGCATTATCCGTCGACTCT
GCTGCGGTCTCGCCTGCTGCTGCAGCTGCTGCCAGTGCCTCCGCTGTTGTGGCAACTGCTGCGGCTGTTGTGACG
CTCCCAACCGACGCCAGCACAAATATCTCGAAGAGCCCTACATCCCCCCGGGTCACGGCTATCAAACCCAGCCTC
CGATGCAGGCCCCCTTCGCATCCGGCGCCACACCCCCTCAGTATGCCCAGTTCGACATGCCCAGAAAGGGAGGCG
AGGATGCCCTACCCGAAATGCCCAGCTGGGAGTCGGGCAGCTCCAAGAGGGTCATGGTCGAGAACGACGAGGTGG
AGATGAACCAGCTGAACAAGCCTTCGTCTCTCCCTCTGGCCCAAACCCCGGCGACTGTCATGACACCGGCGCTCG
CCTCGACGCCCGGCTACGACCATCACTCTCCAGCTTCCTATCCGCGGGATCAACGCGGATACTTTGACCAAGGCG
CCAACCACGCCTTTGACCTGGCGCAGCCGACGCCCAGGGGCCCGTCCCGTCCGTACAACTTGATGCACCAAGACT
CGGGCGACAGCTTCGGCAGGATGGGCGGCGGTCCTTCTCCGTACCCCATGGATGCGCGGGCTCGGGCCGACTATG
GCCAATATCCCAGCCCGACACCCGCGCCCCGTGAGCGGGCAGACTACGGTCCAACGGGCTACTCGAGCGCCGGCT
ACGACACCGGCTACAACACCAGCTACGACACCGGCTACGACACCGGCTACGACATGCCGACGCACTCGTCTCCGC
CCGTCGAGTCTTGGTCCCCGCAGAACCAGCAGTCCAGTGTTCATCATTCGCCGCCCATCACCAACAACGCCGGCT
TCGATTTCACATCCGGCTACGCTCGGCCCGCCCTCGACAATCAACCCGCGAGCGAACCCCCTTCTACCTCTACCC
CGGTCTATCCCGGATACAAGCCATATCAGCCGCCGACACAGGCGAGCTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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