Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|8169
Gene name
Locationscaffold_876:1025..1565
Strand-
Gene length (bp)540
Transcript length (bp)315
Coding sequence length (bp)312
Protein length (aa) 104

Your browser does not support drawing a protein figure.

PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 21 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|8169
MASINVLLLPFLALMGQVLGHTTSATISHTRVVIGYTIVNPVDATACMKTGTSIGLDQFFTCSRHHCQGIFVAND
YSTFGEIPKDVDCVVDANKEAFDRALRTL
Coding >Ophio5|8169
ATGGCTTCGATCAACGTCTTACTGCTCCCTTTCTTGGCTCTCATGGGCCAGGTTTTAGGCCACACGACTTCTGCG
ACGATAAGTCACACCCGTGTGGTTATAGGTTATACCATCGTCAACCCCGTGGATGCTACAGCCTGCATGAAGACG
GGCACGTCCATTGGACTTGACCAGTTCTTCACCTGCTCACGACATCATTGCCAGGGCATCTTTGTGGCCAATGAC
TACAGCACGTTTGGAGAAATTCCCAAAGACGTCGATTGTGTCGTCGACGCCAATAAGGAAGCATTCGATCGAGCG
TTGAGGACATTG
Transcript >Ophio5|8169
ATGGCTTCGATCAACGTCTTACTGCTCCCTTTCTTGGCTCTCATGGGCCAGGTTTTAGGCCACACGACTTCTGCG
ACGATAAGTCACACCCGTGTGGTTATAGGTTATACCATCGTCAACCCCGTGGATGCTACAGCCTGCATGAAGACG
GGCACGTCCATTGGACTTGACCAGTTCTTCACCTGCTCACGACATCATTGCCAGGGCATCTTTGTGGCCAATGAC
TACAGCACGTTTGGAGAAATTCCCAAAGACGTCGATTGTGTCGTCGACGCCAATAAGGAAGCATTCGATCGAGCG
TTGAGGACATTGTGA
Gene >Ophio5|8169
ATGGCTTCGATCAACGTCTTACTGCTCCCTTTCTTGGCTCTCATGGGCCAGGTTTTAGGCCACACGACTTCTGCG
ACGATAAGTCACACCCGTGTGGTTATAGGTTATACCATCGTCAACCCCGTAAGCAAAAAGTAGCTTCGGAAGTCA
AGTCGTTTGCTAGCTGACGCCGGCTCTCCAAGGTGGATGCTACAGCCTGCATGAAGACGGGCACGTCCATTGGAC
TTGACCAGTTCTTCACCTGCTCACGACATCATTGCCAGGGCATCTTTGTGGCCAATGACTACAGCACGTTTGGAG
AAATTCCCAAAGACGTGTCAGTGTTTCCCTTCCAGCGGTAGAAGCCTTCCCTGTGACGTTGGCTGAGGCTTTCGG
ACAGCGATTGTGTCGTCGACGCCAATAAGGAAGCATTCGATCGAGCGGTAAAAGCCAGGATGCCCGTAGATTCTC
TAACACACGTCGAGAAAGCGATTCCCCATATCCACTCGAATTGGACGGTCAACACGACTATACGGATATACCAAG
TTGAGGACATTGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail