© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ophio5|8161 |
| Gene name | |
| Location | scaffold_872:4345..5348 |
| Strand | - |
| Gene length (bp) | 1003 |
| Transcript length (bp) | 795 |
| Coding sequence length (bp) | 792 |
| Protein length (aa) | 264 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q9QZB9|DCTN5_MOUSE | Dynactin subunit 5 OS=Mus musculus GN=Dctn5 PE=1 SV=1 | 65 | 236 | 2.0E-42 |
| sp|Q5R559|DCTN5_PONAB | Dynactin subunit 5 OS=Pongo abelii GN=DCTN5 PE=2 SV=1 | 65 | 236 | 3.0E-42 |
| sp|Q9BTE1|DCTN5_HUMAN | Dynactin subunit 5 OS=Homo sapiens GN=DCTN5 PE=1 SV=1 | 65 | 236 | 3.0E-42 |
| sp|Q54XU5|DCTN5_DICDI | Dynactin subunit 5 OS=Dictyostelium discoideum GN=dynE PE=3 SV=1 | 58 | 232 | 1.0E-36 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 35 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 33 | 55 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophio5|8161 MLPPGSAFRSCVDEGSLNSVACWVARPPPSRRWLLADMCCGFLIFSLFRLLGSLFGGIMSRRAAKGDYIETDSGN KVARKAILVGTQNIMLGGKTVIQPDVMIRGDLVRTAAVSSSSGSPAPANTTAVAIGRYCFLAKGVLLRPPGRLYK GAFTYMPLRLGDHVFVGQGSVVQAATVGSHVHIGARCTVDEFAIIKDYVKILDDTVVPPFMVIPSFSIVAGQPAR VVGEVPEGGHEDFELRELYKTVGNNPQPPASPTKVDRAH |
| Coding | >Ophio5|8161 ATGTTACCCCCCGGGAGCGCTTTCCGAAGCTGTGTCGATGAAGGAAGTCTGAATTCGGTTGCTTGCTGGGTAGCA CGGCCCCCCCCCTCTCGTCGCTGGTTGCTCGCCGACATGTGTTGCGGTTTCTTGATCTTCAGCCTCTTTCGCCTC TTGGGCTCCTTATTCGGCGGCATCATGTCGCGTCGCGCGGCCAAGGGCGACTATATCGAGACTGACTCCGGTAAC AAGGTTGCCCGCAAGGCCATCCTCGTCGGTACGCAGAATATCATGCTCGGCGGCAAGACGGTCATTCAGCCCGAT GTCATGATCCGCGGCGACCTCGTCCGTACCGCCGCCGTCTCGTCGTCCAGCGGCTCGCCCGCTCCGGCCAACACC ACTGCCGTTGCCATCGGCCGGTACTGCTTCCTCGCCAAGGGTGTCTTGCTGCGCCCGCCTGGCCGGCTTTACAAG GGCGCCTTTACCTACATGCCCTTGCGACTGGGCGACCACGTCTTCGTCGGTCAGGGAAGCGTCGTGCAAGCCGCT ACGGTGGGCAGCCACGTGCACATCGGGGCCCGCTGCACCGTCGACGAGTTCGCCATCATCAAGGACTACGTCAAG ATCCTCGACGACACCGTTGTGCCCCCCTTTATGGTCATTCCGAGCTTCTCCATCGTCGCTGGTCAGCCGGCTAGG GTTGTGGGCGAGGTACCCGAGGGCGGCCATGAAGACTTTGAGCTTCGTGAGCTGTATAAGACGGTTGGCAACAAT CCACAGCCACCCGCCAGCCCGACCAAGGTCGACCGCGCACAT |
| Transcript | >Ophio5|8161 ATGTTACCCCCCGGGAGCGCTTTCCGAAGCTGTGTCGATGAAGGAAGTCTGAATTCGGTTGCTTGCTGGGTAGCA CGGCCCCCCCCCTCTCGTCGCTGGTTGCTCGCCGACATGTGTTGCGGTTTCTTGATCTTCAGCCTCTTTCGCCTC TTGGGCTCCTTATTCGGCGGCATCATGTCGCGTCGCGCGGCCAAGGGCGACTATATCGAGACTGACTCCGGTAAC AAGGTTGCCCGCAAGGCCATCCTCGTCGGTACGCAGAATATCATGCTCGGCGGCAAGACGGTCATTCAGCCCGAT GTCATGATCCGCGGCGACCTCGTCCGTACCGCCGCCGTCTCGTCGTCCAGCGGCTCGCCCGCTCCGGCCAACACC ACTGCCGTTGCCATCGGCCGGTACTGCTTCCTCGCCAAGGGTGTCTTGCTGCGCCCGCCTGGCCGGCTTTACAAG GGCGCCTTTACCTACATGCCCTTGCGACTGGGCGACCACGTCTTCGTCGGTCAGGGAAGCGTCGTGCAAGCCGCT ACGGTGGGCAGCCACGTGCACATCGGGGCCCGCTGCACCGTCGACGAGTTCGCCATCATCAAGGACTACGTCAAG ATCCTCGACGACACCGTTGTGCCCCCCTTTATGGTCATTCCGAGCTTCTCCATCGTCGCTGGTCAGCCGGCTAGG GTTGTGGGCGAGGTACCCGAGGGCGGCCATGAAGACTTTGAGCTTCGTGAGCTGTATAAGACGGTTGGCAACAAT CCACAGCCACCCGCCAGCCCGACCAAGGTCGACCGCGCACATTGA |
| Gene | >Ophio5|8161 ATGTTACCCCCCGGGAGTCGGTAGTGCTTTGGCGCGCTTACTGCAGCTAAAAGGCGCTTTCCGAGTGTGTCAATC TCTCATCTACCCATTGGCCGTCGTCACTGAGCCAACGGTCGAGAGAGAGCTGTGTCGATGAAGGAAGTCTGAATT CGGTTGCTTGCTGGTGCTTCTCCTTTTCACACCAATGCGATTGCTTCTTACTAAGCTCTCTCTAGGGTAGCACGG CCCCCCCCCTCTCGTCGCTGGTTGCTCGCCGACATGTGTTGCGGTTTCTTGATCTTCAGCCTCTTTCGCCTCTTG GGCTCCTTATTCGGCGGCATCATGTCGCGTCGCGCGGCCAAGGGCGACTATATCGAGACTGTGAGTCTTTACAGA TCCCGTGAGACGCTTGGATTCACTGACGCGACCACCCCATAAAAAGGACTCCGGTAACAAGGTTGCCCGCAAGGC CATCCTCGTCGGTACGCAGAATATCATGCTCGGCGGCAAGACGGTCATTCAGCCCGATGTCATGATCCGCGGCGA CCTCGTCCGTACCGCCGCCGTCTCGTCGTCCAGCGGCTCGCCCGCTCCGGCCAACACCACTGCCGTTGCCATCGG CCGGTACTGCTTCCTCGCCAAGGGTGTCTTGCTGCGCCCGCCTGGCCGGCTTTACAAGGGCGCCTTTACCTACAT GCCCTTGCGACTGGGCGACCACGTCTTCGTCGGTCAGGGAAGCGTCGTGCAAGCCGCTACGGTGGGCAGCCACGT GCACATCGGGGCCCGCTGCACCGTCGACGAGTTCGCCATCATCAAGGACTACGTCAAGATCCTCGACGACACCGT TGTGCCCCCCTTTATGGTCATTCCGAGCTTCTCCATCGTCGCTGGTCAGCCGGCTAGGGTTGTGGGCGAGGTACC CGAGGGCGGCCATGAAGACTTTGAGCTTCGTGAGCTGTATAAGACGGTTGGCAACAATCCACAGCCACCCGCCAG CCCGACCAAGGTCGACCGCGCACATTGA |