© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Ophio5|8122 |
| Gene name | |
| Location | scaffold_864:2166..3009 |
| Strand | - |
| Gene length (bp) | 843 |
| Transcript length (bp) | 729 |
| Coding sequence length (bp) | 726 |
| Protein length (aa) | 242 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF06916 | FAM210A-B_dom | FAM210A/B-like domain | 1.2E-25 | 89 | 225 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q9URV4|YBL7_SCHPO | Uncharacterized protein C106.07c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC106.07c PE=4 SV=1 | 83 | 231 | 5.0E-21 |
| sp|P37293|NAT2_YEAST | N-terminal acetyltransferase 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=NAT2 PE=1 SV=2 | 90 | 242 | 1.0E-17 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 20 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 98 | 120 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Ophio5|8122 MFRLSAFPLARWRSRQSVAVQGVWRKLFSLETRMAANGSRQWQRSTMRHDAKRTRPTLYLQRRAFNLSPWRRTAG DGGKAPERLSLGARLKKLSKEYGWSAIGVYLALSVLDFPLCFLLVKIVGTEKIGKMEHYVVSTLSSIVPDSMRQR WREYRQAVADARQQQQPQQPGSDGGAAMVVTWGVQEAQRSNDEEASLATQLALAYAIHKSFIFIRVPLTAAVTPK VVKMLRSWGWNIGKRRR |
| Coding | >Ophio5|8122 ATGTTTCGACTATCCGCCTTTCCTCTCGCCAGATGGAGGAGCCGGCAATCGGTCGCCGTACAGGGCGTCTGGAGG AAGCTCTTCAGCCTCGAGACGAGGATGGCGGCCAACGGATCGAGGCAATGGCAGAGGTCGACGATGCGCCATGAT GCGAAGCGGACGAGACCGACCTTGTACCTGCAGCGACGGGCCTTCAACCTGTCCCCCTGGAGACGCACTGCCGGT GACGGGGGCAAGGCTCCGGAGAGGCTGTCGCTGGGCGCGAGGCTAAAGAAGCTCTCCAAGGAATACGGCTGGTCG GCGATAGGCGTCTACCTGGCCCTCAGTGTCCTAGACTTTCCCTTGTGCTTTCTCCTCGTCAAGATAGTCGGGACG GAGAAGATTGGCAAAATGGAGCACTACGTCGTCTCTACCCTGTCGAGCATAGTCCCCGATTCGATGAGGCAGCGA TGGCGCGAGTATCGGCAGGCCGTGGCCGATGCTCGGCAGCAGCAGCAGCCGCAGCAGCCGGGCAGCGACGGCGGG GCAGCAATGGTGGTGACCTGGGGGGTGCAAGAGGCGCAACGAAGCAACGACGAGGAAGCCAGCCTGGCGACGCAA CTGGCACTCGCCTACGCCATCCACAAGAGCTTCATCTTCATCCGGGTGCCACTGACGGCGGCGGTGACGCCCAAA GTCGTCAAGATGCTCAGATCTTGGGGTTGGAACATTGGCAAGCGACGGCGG |
| Transcript | >Ophio5|8122 ATGTTTCGACTATCCGCCTTTCCTCTCGCCAGATGGAGGAGCCGGCAATCGGTCGCCGTACAGGGCGTCTGGAGG AAGCTCTTCAGCCTCGAGACGAGGATGGCGGCCAACGGATCGAGGCAATGGCAGAGGTCGACGATGCGCCATGAT GCGAAGCGGACGAGACCGACCTTGTACCTGCAGCGACGGGCCTTCAACCTGTCCCCCTGGAGACGCACTGCCGGT GACGGGGGCAAGGCTCCGGAGAGGCTGTCGCTGGGCGCGAGGCTAAAGAAGCTCTCCAAGGAATACGGCTGGTCG GCGATAGGCGTCTACCTGGCCCTCAGTGTCCTAGACTTTCCCTTGTGCTTTCTCCTCGTCAAGATAGTCGGGACG GAGAAGATTGGCAAAATGGAGCACTACGTCGTCTCTACCCTGTCGAGCATAGTCCCCGATTCGATGAGGCAGCGA TGGCGCGAGTATCGGCAGGCCGTGGCCGATGCTCGGCAGCAGCAGCAGCCGCAGCAGCCGGGCAGCGACGGCGGG GCAGCAATGGTGGTGACCTGGGGGGTGCAAGAGGCGCAACGAAGCAACGACGAGGAAGCCAGCCTGGCGACGCAA CTGGCACTCGCCTACGCCATCCACAAGAGCTTCATCTTCATCCGGGTGCCACTGACGGCGGCGGTGACGCCCAAA GTCGTCAAGATGCTCAGATCTTGGGGTTGGAACATTGGCAAGCGACGGCGGTGA |
| Gene | >Ophio5|8122 ATGTTTCGACTATCCGCCTTTCCTCTCGCCAGATGGAGGAGCCGGCAATCGGTCGCCGTACAGGGCGTCTGGAGG AAGCTCTTCAGCCTCGAGACGAGGATGGCGGCCAACGGATCGAGGCAATGGCAGAGGTCGACGATGCGCCATGAT GCGAAGCGGACGAGACCGACCTTGTACCTGCAGCGACGGGCCTTCAACCTGTCCCCCTGGAGACGCACTGCCGGT GACGGGGGCAAGGCTCCGGAGAGGCTGTCGCTGGGCGCGAGGCTAAAGAAGCTCTCCAAGGAATACGGCTGGTCG GCGATAGGCGTCTACCTGGCCCTCAGTGTCCTAGACTTTCCCTTGTGCTTTCTCCTCGTCAAGATAGTCGGGACG GAGAAGATTGGTGAGTGTCGGTCGTCCTACTCTCTTGCTTGGCTGGCCGCTTACACGACGATGCCGACAAAAGGC AAAATGGAGCACTACGTCGTCTCTACCCTGTCGAGCATAGTCCCCGATTCGATGAGGCAGCGATGGCGCGAGTAT CGGCAGGCCGTGGCCGATGCTCGGCAGCAGCAGCAGCCGCAGCAGCCGGGCAGCGACGGCGGGGCAGCAATGGTG GTGACCTGGGGGGTGCAAGAGGCGCAACGAAGCAACGACGAGGAAGCCAGTAGGTTTTACGCAGGGTCGTCGCAA GACGAGACGCTGACCAAGCGCCCAGGCCTGGCGACGCAACTGGCACTCGCCTACGCCATCCACAAGAGCTTCATC TTCATCCGGGTGCCACTGACGGCGGCGGTGACGCCCAAAGTCGTCAAGATGCTCAGATCTTGGGGTTGGAACATT GGCAAGCGACGGCGGTGA |