Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|8115
Gene name
Locationscaffold_861:3189..4117
Strand-
Gene length (bp)928
Transcript length (bp)804
Coding sequence length (bp)801
Protein length (aa) 267

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF20238 DUF6595 Family of unknown function (DUF6595) 9.0E-31 23 168

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 20 0.45

Transmembrane Domains

Domain # Start End Length
1 202 224 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|8115
MTFLRHSLLRLSLVAVVAGQHLGPAAFLWPPDRIWSAAADHTAPCGSVARVGARTEFPLRNARISLAAQNEAWDA
RLAVSYLAEPKSDADFSNLIDASILRDVDPGHTCLAVADADPIVRAGDNATLQIRYSFDYDSPFQEFFYACADIV
YVRPERFRRPSLSCFKATVVETDDYDDDLPWPDGLTAPANDISDYGGLSGGAVAGIVVAAVAMAMLLVVAALLLY
RRRRQRSRKLRQQNSVRAVKWDQQADSQAPVAPGNVKLRDLS
Coding >Ophio5|8115
ATGACGTTTCTCCGCCATTCTCTTCTGCGCTTGTCTCTGGTTGCAGTCGTCGCTGGCCAGCATCTGGGTCCTGCG
GCCTTTCTCTGGCCGCCTGACCGCATCTGGTCTGCGGCTGCTGATCATACGGCCCCTTGCGGCTCTGTAGCTCGC
GTCGGCGCGAGGACCGAGTTCCCGCTTCGAAACGCCAGAATCTCTCTCGCCGCTCAGAACGAGGCGTGGGATGCC
AGGCTCGCCGTCTCCTACCTAGCCGAACCAAAGTCCGACGCCGACTTTTCCAATCTTATAGACGCCTCTATTCTA
CGCGACGTCGACCCCGGCCATACGTGCCTCGCCGTCGCGGACGCTGACCCTATAGTTCGCGCCGGCGATAATGCG
ACGCTCCAGATCCGCTACAGCTTCGACTATGATAGCCCGTTTCAGGAGTTCTTCTACGCCTGTGCCGACATCGTC
TACGTCAGACCCGAACGCTTTCGTCGCCCGTCGCTTTCGTGCTTCAAAGCCACAGTGGTCGAGACGGACGACTAC
GATGACGACCTGCCCTGGCCGGATGGCCTGACGGCGCCCGCCAATGATATAAGCGATTACGGCGGCCTGTCTGGT
GGCGCCGTCGCCGGCATCGTCGTCGCTGCCGTTGCCATGGCCATGTTGCTGGTCGTCGCGGCGCTGTTGCTTTAT
CGCCGCAGGCGCCAGCGATCGCGCAAGCTGCGCCAGCAGAACTCTGTCCGCGCTGTCAAGTGGGATCAGCAGGCA
GACTCTCAGGCACCCGTGGCTCCGGGCAATGTGAAACTACGGGACCTGTCG
Transcript >Ophio5|8115
ATGACGTTTCTCCGCCATTCTCTTCTGCGCTTGTCTCTGGTTGCAGTCGTCGCTGGCCAGCATCTGGGTCCTGCG
GCCTTTCTCTGGCCGCCTGACCGCATCTGGTCTGCGGCTGCTGATCATACGGCCCCTTGCGGCTCTGTAGCTCGC
GTCGGCGCGAGGACCGAGTTCCCGCTTCGAAACGCCAGAATCTCTCTCGCCGCTCAGAACGAGGCGTGGGATGCC
AGGCTCGCCGTCTCCTACCTAGCCGAACCAAAGTCCGACGCCGACTTTTCCAATCTTATAGACGCCTCTATTCTA
CGCGACGTCGACCCCGGCCATACGTGCCTCGCCGTCGCGGACGCTGACCCTATAGTTCGCGCCGGCGATAATGCG
ACGCTCCAGATCCGCTACAGCTTCGACTATGATAGCCCGTTTCAGGAGTTCTTCTACGCCTGTGCCGACATCGTC
TACGTCAGACCCGAACGCTTTCGTCGCCCGTCGCTTTCGTGCTTCAAAGCCACAGTGGTCGAGACGGACGACTAC
GATGACGACCTGCCCTGGCCGGATGGCCTGACGGCGCCCGCCAATGATATAAGCGATTACGGCGGCCTGTCTGGT
GGCGCCGTCGCCGGCATCGTCGTCGCTGCCGTTGCCATGGCCATGTTGCTGGTCGTCGCGGCGCTGTTGCTTTAT
CGCCGCAGGCGCCAGCGATCGCGCAAGCTGCGCCAGCAGAACTCTGTCCGCGCTGTCAAGTGGGATCAGCAGGCA
GACTCTCAGGCACCCGTGGCTCCGGGCAATGTGAAACTACGGGACCTGTCGTAA
Gene >Ophio5|8115
ATGACGTTTCTCCGCCATTCTCTTCTGCGCTTGTCTCTGGTTGCAGTCGTCGCTGGCCAGCATCTGGGTCCTGCG
GCCTTTCTCTGGCCGCCTGACCGCATCTGGTCTGCGGCTGCTGATCATACGGCCCCTTGCGGCTCTGTAGCTCGC
GTCGGCGCGAGGACCGAGTTCCCGCTTCGTGCGAATTCACTCTCTTAGCTCTCTCCTTCTGCCAACTTTTTTTTT
TTGGCTGACAGGAATTGACAGGAAACGCCAGAATCTCTCTCGCCGCTCAGAACGAGGCGTGGGATGCCAGGCTCG
CCGTCTCCTACCTAGCCGGTGGGTTTGACCTGGTAGATTCAATGCCGCCAGCTGACGGCGACTCAACAAACTAGA
ACCAAAGTCCGACGCCGACTTTTCCAATCTTATAGACGCCTCTATTCTACGCGACGTCGACCCCGGCCATACGTG
CCTCGCCGTCGCGGACGCTGACCCTATAGTTCGCGCCGGCGATAATGCGACGCTCCAGATCCGCTACAGCTTCGA
CTATGATAGCCCGTTTCAGGAGTTCTTCTACGCCTGTGCCGACATCGTCTACGTCAGACCCGAACGCTTTCGTCG
CCCGTCGCTTTCGTGCTTCAAAGCCACAGTGGTCGAGACGGACGACTACGATGACGACCTGCCCTGGCCGGATGG
CCTGACGGCGCCCGCCAATGATATAAGCGATTACGGCGGCCTGTCTGGTGGCGCCGTCGCCGGCATCGTCGTCGC
TGCCGTTGCCATGGCCATGTTGCTGGTCGTCGCGGCGCTGTTGCTTTATCGCCGCAGGCGCCAGCGATCGCGCAA
GCTGCGCCAGCAGAACTCTGTCCGCGCTGTCAAGTGGGATCAGCAGGCAGACTCTCAGGCACCCGTGGCTCCGGG
CAATGTGAAACTACGGGACCTGTCGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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