Protein ID | Ophio5|8101 |
Gene name | |
Location | scaffold_86:27170..28055 |
Strand | + |
Gene length (bp) | 885 |
Transcript length (bp) | 885 |
Coding sequence length (bp) | 882 |
Protein length (aa) | 294 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF06148 | COG2 | COG (conserved oligomeric Golgi) complex component, COG2 | 2.3E-22 | 34 | 162 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 11 | 0.45 |
Expression values
Label | Description | Expression (RPKM) | Confidence interval (low) | Confidence interval (high) |
---|---|---|---|---|
SC16a | Pure fungal culture | 32.80 | 14.75 | 50.85 |
CcL | In ants, during behavior modification | 53.35 | 22.80 | 83.89 |
CcD | In ants, recently dead | 13.81 | 4.65 | 22.96 |
Differential expression
Label1 | Label2 | Q-value | Significant difference |
---|---|---|---|
SC16a | CcL | 0.079104 | no |
SC16a | CcD | 0.003199 | yes |
CcL | CcD | 0.000286 | yes |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Ophio5|8101 MAPARAPSPPSSSSSSSFAAEDGASLPFPAALPRSDFLAADFHPAAYLSALPHRHQTLEDLRADLRDRSSAISAE LLELVNANYTSFLSLGSELDGGDDRVEDLRVALLGFRRAVDEIKANVARRRCETHALNVKLRRMRLSVARARAML DLSDRLSALEESLAVATDGQEGPDESVAVEGADDDDDVDESDDADADEHPHGLLGSPPAKLLQSAKECRRLHALA ASLDLEHPFVTKMQRRLSRCRSTLLLDLSNALKEARAAGRRADGRLMRYLEIYRVLETPRDAVKALRNH |
Coding | >Ophio5|8101 ATGGCTCCCGCCCGCGCCCCGTCTCCCCCCTCCTCCTCCTCCTCCTCCTCCTTCGCGGCGGAAGACGGCGCTTCC CTCCCCTTCCCCGCCGCGCTGCCACGTTCCGACTTCCTGGCCGCCGACTTCCACCCCGCCGCCTACCTCTCGGCG CTGCCACATCGCCACCAGACACTCGAGGATCTTCGCGCCGACCTCCGAGACCGCAGCAGCGCCATCAGCGCAGAG TTGCTAGAGCTCGTCAACGCAAACTATACTTCTTTCCTATCTCTCGGTAGCGAGCTTGATGGCGGCGACGACCGA GTTGAAGACCTGCGTGTCGCCCTTCTGGGCTTCCGCCGCGCCGTCGACGAGATCAAGGCCAACGTTGCTCGGCGT CGCTGCGAGACGCACGCTCTCAACGTCAAATTGCGGCGCATGCGTCTGTCTGTCGCCCGGGCGCGCGCTATGCTT GACCTCTCCGATCGCCTTTCTGCCCTCGAGGAGAGCCTGGCTGTCGCGACTGATGGCCAAGAGGGGCCTGACGAG TCCGTTGCTGTCGAAGGCGCCGACGACGACGACGACGTCGATGAGTCCGATGACGCCGACGCCGACGAGCATCCA CACGGCCTGCTTGGTAGTCCGCCTGCTAAGCTCCTGCAGTCTGCTAAGGAATGTCGTCGTCTCCATGCGCTGGCG GCCTCACTCGATCTCGAGCACCCTTTCGTCACCAAGATGCAGCGTCGTCTTTCGAGATGCCGCAGCACCTTGCTT CTCGACTTGTCCAACGCGCTCAAGGAGGCAAGGGCCGCCGGCCGCAGAGCAGACGGCCGGCTCATGCGATATTTA GAGATATACCGTGTCTTGGAAACACCGCGAGACGCTGTCAAGGCCCTCCGTAATCAT |
Transcript | >Ophio5|8101 ATGGCTCCCGCCCGCGCCCCGTCTCCCCCCTCCTCCTCCTCCTCCTCCTCCTTCGCGGCGGAAGACGGCGCTTCC CTCCCCTTCCCCGCCGCGCTGCCACGTTCCGACTTCCTGGCCGCCGACTTCCACCCCGCCGCCTACCTCTCGGCG CTGCCACATCGCCACCAGACACTCGAGGATCTTCGCGCCGACCTCCGAGACCGCAGCAGCGCCATCAGCGCAGAG TTGCTAGAGCTCGTCAACGCAAACTATACTTCTTTCCTATCTCTCGGTAGCGAGCTTGATGGCGGCGACGACCGA GTTGAAGACCTGCGTGTCGCCCTTCTGGGCTTCCGCCGCGCCGTCGACGAGATCAAGGCCAACGTTGCTCGGCGT CGCTGCGAGACGCACGCTCTCAACGTCAAATTGCGGCGCATGCGTCTGTCTGTCGCCCGGGCGCGCGCTATGCTT GACCTCTCCGATCGCCTTTCTGCCCTCGAGGAGAGCCTGGCTGTCGCGACTGATGGCCAAGAGGGGCCTGACGAG TCCGTTGCTGTCGAAGGCGCCGACGACGACGACGACGTCGATGAGTCCGATGACGCCGACGCCGACGAGCATCCA CACGGCCTGCTTGGTAGTCCGCCTGCTAAGCTCCTGCAGTCTGCTAAGGAATGTCGTCGTCTCCATGCGCTGGCG GCCTCACTCGATCTCGAGCACCCTTTCGTCACCAAGATGCAGCGTCGTCTTTCGAGATGCCGCAGCACCTTGCTT CTCGACTTGTCCAACGCGCTCAAGGAGGCAAGGGCCGCCGGCCGCAGAGCAGACGGCCGGCTCATGCGATATTTA GAGATATACCGTGTCTTGGAAACACCGCGAGACGCTGTCAAGGCCCTCCGTAATCATTGA |
Gene | >Ophio5|8101 ATGGCTCCCGCCCGCGCCCCGTCTCCCCCCTCCTCCTCCTCCTCCTCCTCCTTCGCGGCGGAAGACGGCGCTTCC CTCCCCTTCCCCGCCGCGCTGCCACGTTCCGACTTCCTGGCCGCCGACTTCCACCCCGCCGCCTACCTCTCGGCG CTGCCACATCGCCACCAGACACTCGAGGATCTTCGCGCCGACCTCCGAGACCGCAGCAGCGCCATCAGCGCAGAG TTGCTAGAGCTCGTCAACGCAAACTATACTTCTTTCCTATCTCTCGGTAGCGAGCTTGATGGCGGCGACGACCGA GTTGAAGACCTGCGTGTCGCCCTTCTGGGCTTCCGCCGCGCCGTCGACGAGATCAAGGCCAACGTTGCTCGGCGT CGCTGCGAGACGCACGCTCTCAACGTCAAATTGCGGCGCATGCGTCTGTCTGTCGCCCGGGCGCGCGCTATGCTT GACCTCTCCGATCGCCTTTCTGCCCTCGAGGAGAGCCTGGCTGTCGCGACTGATGGCCAAGAGGGGCCTGACGAG TCCGTTGCTGTCGAAGGCGCCGACGACGACGACGACGTCGATGAGTCCGATGACGCCGACGCCGACGAGCATCCA CACGGCCTGCTTGGTAGTCCGCCTGCTAAGCTCCTGCAGTCTGCTAAGGAATGTCGTCGTCTCCATGCGCTGGCG GCCTCACTCGATCTCGAGCACCCTTTCGTCACCAAGATGCAGCGTCGTCTTTCGAGATGCCGCAGCACCTTGCTT CTCGACTTGTCCAACGCGCTCAAGGAGGCAAGGGCCGCCGGCCGCAGAGCAGACGGCCGGCTCATGCGATATTTA GAGATATACCGTGTCTTGGAAACACCGCGAGACGCTGTCAAGGCCCTCCGTAATCATTGA |