Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|8101
Gene name
Locationscaffold_86:27170..28055
Strand+
Gene length (bp)885
Transcript length (bp)885
Coding sequence length (bp)882
Protein length (aa) 294

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF06148 COG2 COG (conserved oligomeric Golgi) complex component, COG2 2.3E-22 34 162

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 11 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|8101
MAPARAPSPPSSSSSSSFAAEDGASLPFPAALPRSDFLAADFHPAAYLSALPHRHQTLEDLRADLRDRSSAISAE
LLELVNANYTSFLSLGSELDGGDDRVEDLRVALLGFRRAVDEIKANVARRRCETHALNVKLRRMRLSVARARAML
DLSDRLSALEESLAVATDGQEGPDESVAVEGADDDDDVDESDDADADEHPHGLLGSPPAKLLQSAKECRRLHALA
ASLDLEHPFVTKMQRRLSRCRSTLLLDLSNALKEARAAGRRADGRLMRYLEIYRVLETPRDAVKALRNH
Coding >Ophio5|8101
ATGGCTCCCGCCCGCGCCCCGTCTCCCCCCTCCTCCTCCTCCTCCTCCTCCTTCGCGGCGGAAGACGGCGCTTCC
CTCCCCTTCCCCGCCGCGCTGCCACGTTCCGACTTCCTGGCCGCCGACTTCCACCCCGCCGCCTACCTCTCGGCG
CTGCCACATCGCCACCAGACACTCGAGGATCTTCGCGCCGACCTCCGAGACCGCAGCAGCGCCATCAGCGCAGAG
TTGCTAGAGCTCGTCAACGCAAACTATACTTCTTTCCTATCTCTCGGTAGCGAGCTTGATGGCGGCGACGACCGA
GTTGAAGACCTGCGTGTCGCCCTTCTGGGCTTCCGCCGCGCCGTCGACGAGATCAAGGCCAACGTTGCTCGGCGT
CGCTGCGAGACGCACGCTCTCAACGTCAAATTGCGGCGCATGCGTCTGTCTGTCGCCCGGGCGCGCGCTATGCTT
GACCTCTCCGATCGCCTTTCTGCCCTCGAGGAGAGCCTGGCTGTCGCGACTGATGGCCAAGAGGGGCCTGACGAG
TCCGTTGCTGTCGAAGGCGCCGACGACGACGACGACGTCGATGAGTCCGATGACGCCGACGCCGACGAGCATCCA
CACGGCCTGCTTGGTAGTCCGCCTGCTAAGCTCCTGCAGTCTGCTAAGGAATGTCGTCGTCTCCATGCGCTGGCG
GCCTCACTCGATCTCGAGCACCCTTTCGTCACCAAGATGCAGCGTCGTCTTTCGAGATGCCGCAGCACCTTGCTT
CTCGACTTGTCCAACGCGCTCAAGGAGGCAAGGGCCGCCGGCCGCAGAGCAGACGGCCGGCTCATGCGATATTTA
GAGATATACCGTGTCTTGGAAACACCGCGAGACGCTGTCAAGGCCCTCCGTAATCAT
Transcript >Ophio5|8101
ATGGCTCCCGCCCGCGCCCCGTCTCCCCCCTCCTCCTCCTCCTCCTCCTCCTTCGCGGCGGAAGACGGCGCTTCC
CTCCCCTTCCCCGCCGCGCTGCCACGTTCCGACTTCCTGGCCGCCGACTTCCACCCCGCCGCCTACCTCTCGGCG
CTGCCACATCGCCACCAGACACTCGAGGATCTTCGCGCCGACCTCCGAGACCGCAGCAGCGCCATCAGCGCAGAG
TTGCTAGAGCTCGTCAACGCAAACTATACTTCTTTCCTATCTCTCGGTAGCGAGCTTGATGGCGGCGACGACCGA
GTTGAAGACCTGCGTGTCGCCCTTCTGGGCTTCCGCCGCGCCGTCGACGAGATCAAGGCCAACGTTGCTCGGCGT
CGCTGCGAGACGCACGCTCTCAACGTCAAATTGCGGCGCATGCGTCTGTCTGTCGCCCGGGCGCGCGCTATGCTT
GACCTCTCCGATCGCCTTTCTGCCCTCGAGGAGAGCCTGGCTGTCGCGACTGATGGCCAAGAGGGGCCTGACGAG
TCCGTTGCTGTCGAAGGCGCCGACGACGACGACGACGTCGATGAGTCCGATGACGCCGACGCCGACGAGCATCCA
CACGGCCTGCTTGGTAGTCCGCCTGCTAAGCTCCTGCAGTCTGCTAAGGAATGTCGTCGTCTCCATGCGCTGGCG
GCCTCACTCGATCTCGAGCACCCTTTCGTCACCAAGATGCAGCGTCGTCTTTCGAGATGCCGCAGCACCTTGCTT
CTCGACTTGTCCAACGCGCTCAAGGAGGCAAGGGCCGCCGGCCGCAGAGCAGACGGCCGGCTCATGCGATATTTA
GAGATATACCGTGTCTTGGAAACACCGCGAGACGCTGTCAAGGCCCTCCGTAATCATTGA
Gene >Ophio5|8101
ATGGCTCCCGCCCGCGCCCCGTCTCCCCCCTCCTCCTCCTCCTCCTCCTCCTTCGCGGCGGAAGACGGCGCTTCC
CTCCCCTTCCCCGCCGCGCTGCCACGTTCCGACTTCCTGGCCGCCGACTTCCACCCCGCCGCCTACCTCTCGGCG
CTGCCACATCGCCACCAGACACTCGAGGATCTTCGCGCCGACCTCCGAGACCGCAGCAGCGCCATCAGCGCAGAG
TTGCTAGAGCTCGTCAACGCAAACTATACTTCTTTCCTATCTCTCGGTAGCGAGCTTGATGGCGGCGACGACCGA
GTTGAAGACCTGCGTGTCGCCCTTCTGGGCTTCCGCCGCGCCGTCGACGAGATCAAGGCCAACGTTGCTCGGCGT
CGCTGCGAGACGCACGCTCTCAACGTCAAATTGCGGCGCATGCGTCTGTCTGTCGCCCGGGCGCGCGCTATGCTT
GACCTCTCCGATCGCCTTTCTGCCCTCGAGGAGAGCCTGGCTGTCGCGACTGATGGCCAAGAGGGGCCTGACGAG
TCCGTTGCTGTCGAAGGCGCCGACGACGACGACGACGTCGATGAGTCCGATGACGCCGACGCCGACGAGCATCCA
CACGGCCTGCTTGGTAGTCCGCCTGCTAAGCTCCTGCAGTCTGCTAAGGAATGTCGTCGTCTCCATGCGCTGGCG
GCCTCACTCGATCTCGAGCACCCTTTCGTCACCAAGATGCAGCGTCGTCTTTCGAGATGCCGCAGCACCTTGCTT
CTCGACTTGTCCAACGCGCTCAAGGAGGCAAGGGCCGCCGGCCGCAGAGCAGACGGCCGGCTCATGCGATATTTA
GAGATATACCGTGTCTTGGAAACACCGCGAGACGCTGTCAAGGCCCTCCGTAATCATTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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