Fungal Genomics

at Utrecht University

General Properties

Protein IDOphio5|808
Gene name
Locationscaffold_123:798..2621
Strand+
Gene length (bp)1823
Transcript length (bp)1614
Coding sequence length (bp)1611
Protein length (aa) 537

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00999 Na_H_Exchanger Sodium/hydrogen exchanger family 6.6E-51 22 452

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|Q99271|NAH1_YEAST Na(+)/H(+) antiporter OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=NHA1 PE=1 SV=1 11 457 3.0E-86
sp|O14123|NAH2_SCHPO Probable Na(+)/H(+) antiporter C3A11.09 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=sod22 PE=1 SV=1 11 457 5.0E-85
sp|O42701|NAH2_ZYGRO Na(+)/H(+) antiporter 2 OS=Zygosaccharomyces rouxii GN=SOD22 PE=3 SV=1 11 460 9.0E-82
sp|Q99173|NAH1_ZYGRO Na(+)/H(+) antiporter 1 OS=Zygosaccharomyces rouxii GN=SOD2 PE=3 SV=1 11 457 2.0E-81
sp|P36606|NAH_SCHPO Na(+)/H(+) antiporter OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=sod2 PE=1 SV=1 11 474 7.0E-61

GO

GO Term Description Terminal node
GO:0006812 cation transport Yes
GO:0015299 solute:proton antiporter activity Yes
GO:0055085 transmembrane transport Yes
GO:0016021 integral component of membrane Yes
GO:0008150 biological_process No
GO:0022857 transmembrane transporter activity No
GO:0022804 active transmembrane transporter activity No
GO:0015297 antiporter activity No
GO:0031224 intrinsic component of membrane No
GO:0051234 establishment of localization No
GO:0006810 transport No
GO:0051179 localization No
GO:0003674 molecular_function No
GO:0005215 transporter activity No
GO:0110165 cellular anatomical entity No
GO:0009987 cellular process No
GO:0015298 solute:cation antiporter activity No
GO:0005575 cellular_component No
GO:0015291 secondary active transmembrane transporter activity No
GO:0006811 ion transport No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 12 0.5

Transmembrane Domains

Domain # Start End Length
1 13 35 22
2 45 64 19
3 122 144 22
4 149 171 22
5 192 214 22
6 229 251 22
7 271 290 19
8 342 364 22
9 385 407 22
10 432 454 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Expression analysis during behavioral modification. Published in De Bekker et al., 2017.

Expression values

Label Description Expression (RPKM) Confidence interval (low) Confidence interval (high)
SC16a Pure fungal culture 15.55 6.96 24.15
CcL In ants, during behavior modification 213.88 100.53 327.23
CcD In ants, recently dead 162.21 82.30 242.12

Differential expression

Label1 Label2 Q-value Significant difference
SC16a CcL 0.000286 yes
SC16a CcD 0.000286 yes
CcL CcD 0.293496 no

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Ophio5|808
MADNKVWVIPLELSNYNVIVALLGGFISLFGLVSFLLKENFYLSEALISLLAGLAFGPLGANFIRPRAYSECNQS
GVSDIECEDNLNSITLNFSRLVLAVQLVLAGVQLPSKYLWKELKPVLLLIGPGMICMWLATSLLVWGLAGTPSFL
QALAVGACVTPTDPVLSAVIVKGKFADENIPKDLQNLIIAESGVNDGLGYPFLFLALYLIKYIGSGSSSGGVREA
IGLWFAITWAYTILLSIVFGAVVGWIAKELLHWAEERNYVDRESFLIFSIALALFVLGTCGLIGTDDLLACFIAG
NTFTWDDWFRVQTQDDSLQPTIDMLLNVSIFLWYGASLPWGLFGHNAVISTGRLVALGFLVLLLRRLPWVFCMHR
WIGQIEDVTQAIFVGFFGPIGVSAVFYLLICLNFIEDHLSDENGQARNDVTNFGETIRVIVWFLVVCSTVVHGLS
IPLGKMGYLAPRKIGRVVSRSLSDEPRMVQARVKMPVIDVQSSRAIHLASDEQRQAESSADGSGTATPARQEREI
QFSDEIDAGHND
Coding >Ophio5|808
ATGGCGGATAACAAGGTTTGGGTAATTCCACTGGAGTTGTCCAACTACAACGTCATCGTGGCCCTGCTGGGCGGC
TTCATCTCGCTCTTTGGCTTGGTTTCCTTTCTGTTGAAGGAGAACTTCTATCTCTCGGAAGCTCTCATCTCTCTC
TTGGCGGGCCTCGCCTTTGGTCCGCTGGGCGCAAACTTCATTCGACCCAGGGCCTATTCCGAGTGCAACCAGAGC
GGTGTGTCGGATATCGAGTGCGAGGATAACCTAAATAGCATCACCCTCAACTTCTCTCGCCTCGTCCTCGCCGTT
CAGCTCGTCCTCGCGGGGGTCCAACTTCCTAGCAAATACCTATGGAAAGAACTGAAGCCTGTCTTGTTACTCATC
GGGCCTGGCATGATATGCATGTGGCTCGCCACCAGTCTTCTCGTCTGGGGCCTCGCGGGCACGCCTAGCTTCCTG
CAAGCCCTGGCCGTCGGGGCGTGTGTCACGCCTACGGATCCTGTCCTATCGGCCGTGATTGTCAAGGGCAAATTT
GCCGACGAGAATATACCCAAGGACCTCCAAAACCTTATCATAGCGGAATCGGGTGTCAACGATGGGCTCGGCTAC
CCGTTCTTGTTCCTCGCCCTCTACCTCATCAAGTATATCGGCTCCGGATCCTCGTCCGGTGGCGTGAGGGAGGCC
ATCGGTCTCTGGTTCGCGATAACCTGGGCGTATACAATACTGCTCAGCATCGTATTCGGCGCTGTGGTGGGATGG
ATAGCCAAGGAGCTGCTTCACTGGGCCGAGGAGCGCAACTACGTCGATCGCGAAAGCTTTCTCATCTTCTCTATT
GCGCTCGCCCTGTTTGTACTAGGGACCTGTGGCCTGATTGGAACCGATGATCTTCTCGCCTGCTTCATCGCCGGT
AATACGTTTACGTGGGACGATTGGTTCCGCGTGCAGACCCAAGACGACTCTCTCCAGCCGACGATCGATATGCTA
CTCAACGTATCCATCTTCCTCTGGTACGGCGCGTCCCTCCCCTGGGGCCTCTTTGGTCACAACGCCGTCATCTCT
ACCGGGCGACTCGTCGCTCTCGGCTTCCTCGTGCTGCTTCTCAGGCGATTGCCGTGGGTCTTTTGTATGCATAGG
TGGATCGGCCAGATCGAAGACGTCACGCAAGCCATTTTCGTCGGTTTCTTCGGACCCATTGGTGTCTCGGCCGTC
TTTTATCTACTAATCTGCCTGAATTTCATCGAGGATCATCTGAGCGACGAGAATGGACAGGCAAGAAACGACGTG
ACGAATTTTGGCGAAACTATTCGTGTCATCGTCTGGTTTCTCGTTGTTTGTAGCACTGTTGTTCATGGACTCAGC
ATTCCGCTCGGCAAGATGGGATACCTGGCACCGAGAAAGATTGGGCGTGTTGTGAGTCGGAGTTTGAGTGATGAG
CCACGCATGGTGCAGGCTCGAGTCAAGATGCCCGTCATAGATGTTCAGAGCTCACGTGCGATTCATTTGGCCTCG
GATGAGCAGAGACAAGCTGAGAGCTCTGCGGATGGGTCGGGGACTGCAACCCCCGCTCGGCAGGAAAGGGAGATT
CAATTTTCTGACGAGATAGACGCAGGACACAATGAC
Transcript >Ophio5|808
ATGGCGGATAACAAGGTTTGGGTAATTCCACTGGAGTTGTCCAACTACAACGTCATCGTGGCCCTGCTGGGCGGC
TTCATCTCGCTCTTTGGCTTGGTTTCCTTTCTGTTGAAGGAGAACTTCTATCTCTCGGAAGCTCTCATCTCTCTC
TTGGCGGGCCTCGCCTTTGGTCCGCTGGGCGCAAACTTCATTCGACCCAGGGCCTATTCCGAGTGCAACCAGAGC
GGTGTGTCGGATATCGAGTGCGAGGATAACCTAAATAGCATCACCCTCAACTTCTCTCGCCTCGTCCTCGCCGTT
CAGCTCGTCCTCGCGGGGGTCCAACTTCCTAGCAAATACCTATGGAAAGAACTGAAGCCTGTCTTGTTACTCATC
GGGCCTGGCATGATATGCATGTGGCTCGCCACCAGTCTTCTCGTCTGGGGCCTCGCGGGCACGCCTAGCTTCCTG
CAAGCCCTGGCCGTCGGGGCGTGTGTCACGCCTACGGATCCTGTCCTATCGGCCGTGATTGTCAAGGGCAAATTT
GCCGACGAGAATATACCCAAGGACCTCCAAAACCTTATCATAGCGGAATCGGGTGTCAACGATGGGCTCGGCTAC
CCGTTCTTGTTCCTCGCCCTCTACCTCATCAAGTATATCGGCTCCGGATCCTCGTCCGGTGGCGTGAGGGAGGCC
ATCGGTCTCTGGTTCGCGATAACCTGGGCGTATACAATACTGCTCAGCATCGTATTCGGCGCTGTGGTGGGATGG
ATAGCCAAGGAGCTGCTTCACTGGGCCGAGGAGCGCAACTACGTCGATCGCGAAAGCTTTCTCATCTTCTCTATT
GCGCTCGCCCTGTTTGTACTAGGGACCTGTGGCCTGATTGGAACCGATGATCTTCTCGCCTGCTTCATCGCCGGT
AATACGTTTACGTGGGACGATTGGTTCCGCGTGCAGACCCAAGACGACTCTCTCCAGCCGACGATCGATATGCTA
CTCAACGTATCCATCTTCCTCTGGTACGGCGCGTCCCTCCCCTGGGGCCTCTTTGGTCACAACGCCGTCATCTCT
ACCGGGCGACTCGTCGCTCTCGGCTTCCTCGTGCTGCTTCTCAGGCGATTGCCGTGGGTCTTTTGTATGCATAGG
TGGATCGGCCAGATCGAAGACGTCACGCAAGCCATTTTCGTCGGTTTCTTCGGACCCATTGGTGTCTCGGCCGTC
TTTTATCTACTAATCTGCCTGAATTTCATCGAGGATCATCTGAGCGACGAGAATGGACAGGCAAGAAACGACGTG
ACGAATTTTGGCGAAACTATTCGTGTCATCGTCTGGTTTCTCGTTGTTTGTAGCACTGTTGTTCATGGACTCAGC
ATTCCGCTCGGCAAGATGGGATACCTGGCACCGAGAAAGATTGGGCGTGTTGTGAGTCGGAGTTTGAGTGATGAG
CCACGCATGGTGCAGGCTCGAGTCAAGATGCCCGTCATAGATGTTCAGAGCTCACGTGCGATTCATTTGGCCTCG
GATGAGCAGAGACAAGCTGAGAGCTCTGCGGATGGGTCGGGGACTGCAACCCCCGCTCGGCAGGAAAGGGAGATT
CAATTTTCTGACGAGATAGACGCAGGACACAATGACTGA
Gene >Ophio5|808
ATGGCGGATAACAAGGTTTGGGTAATTCCACTGGAGTTGTCCAACTACAACGTCATCGTGGCCCTGCTGGGCGGC
TTCATCTCGCTCTTTGGCTTGGTTTCCTTTCTGTTGAAGGAGAACTTCTATCTCTCGGAAGCTCGTAAGTCCCCT
TGCATGGATCCCGATGTAACGTAGCGCCACATGCATTCCTAGTGCTAAGCTTCTCATAGTCATCTCTCTCTTGGC
GGGCCTCGCCTTTGGTCCGCTGGGCGCAAACTTCATTCGACCCAGGGCCTATTCCGAGTGCAACCAGAGCGGTGT
GTCGGATATCGAGTGCGAGGATAACCTAAATAGCATCACCCTCAACTTCTCTCGCCTCGTCCTCGCCGTTCAGCT
CGTCCTCGCGGGGGTCCAACTTCCTAGCAAATACCTATGGAAAGAACTGAAGCCTGTCTTGTTACTCATCGGGCC
TGGCATGATATGCATGTGGCTCGCCACCAGTCTTCTCGTCTGGGGCCTCGCGGGCACGCCTAGCTTCCTGCAAGC
CCTGGCCGTCGGGGCGTGTGTCACGCCTACGGATCCTGTCCTATCGGCCGTGATTGTCAAGGGCAAATTTGCCGA
CGAGAATATACCCAAGGACCTCCAAAACCTTATCATAGCGGAATCGGGTGTCAACGATGGGCTCGGCTACCCGTT
CTTGTTCCTCGCCCTCTACCTCATCAAGTATATCGGCTCCGGATCCTCGTCCGGTGGCGTGAGGGAGGCCATCGG
TCTCTGGTTCGCGATAACCTGGGCGTATACAATACTGCTCAGCATCGTATTCGGCGCTGTGGTGGGATGGATAGC
CAAGGAGCTGCTTCACTGGGCCGAGGAGCGCAACTACGTCGATCGCGAAAGCTTTCTCATCTTCTCTATTGCGCT
CGCCCTGTTTGTACTAGGGACCTGTGGCCTGATTGGAACCGATGATCTTCTCGCCTGCTTCATCGCCGGTAATAC
GTTTACGTGGGACGATTGGTTCCGCGTGCAGACCCAAGACGACTCTCTCCAGCCGACGATCGATATGCTACTCAA
CGTATCCATCTTCCTCTGGTACGGCGCGTCCCTCCCCTGGGGCCTCTTTGGTCACAACGCCGTCATCTCTACCGG
GCGACTCGTCGCTCTCGGCTTCCTCGTGCTGCTTCTCAGGCGATTGCCGTGGGTCTTTTGTATGCATAGGTGGAT
CGGCCAGATCGAAGACGTCACGCAAGCCATTTTCGTCGGTTTCTTCGGACCCATTGGTGTCTCGGCCGTCTTTTA
TCTACTAATCTGCCTGAATTTCATCGAGGATCATCTGAGCGACGAGAATGGACAGGCAAGAAACGACGTGACGAA
TTTTGGCGAAACTATTCGTGTCATCGTCTGGTTTCTCGTTGTTTGTAGCACTGTGAGTGTTTACATGCCGCAACA
TGTCTCCTCGTCCCGCCCTCCTTCCGTCTAACCCTTGGCTCCATCAGGTTGTTCATGGACTCAGCATTCCGCTCG
GCAAGATGGGATACCTGGCACCGAGAAAGATTGGGCGTGTTGTGAGTCGGAGTTTGAGTGATGAGCCACGCATGG
TGCAGGCTCGAGTCAAGATGCCCGTCATAGGCAGGTATTTCTCCGCCAGGAACACGAGTGGCAGCGTCGTGACCA
GCCCCGCCAGGAGGAGCTCTATAGATGTTCAGAGCTCACGTGCGATTCATTTGGCCTCGGATGAGCAGAGACAAG
CTGAGAGCTCTGCGGATGGGTCGGGGACTGCAACCCCCGCTCGGCAGGAAAGGGAGATTCAATTTTCTGACGAGA
TAGACGCAGGACACAATGACTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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